RNA–Protein interactions for RNA: ENST00000464818.1

PRKCD-203, Transcript of protein kinase C delta, humanhuman

TSL 5

Gene PRKCD, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-203ENST00000464818 NISCHQ9Y2I1 1504 aa40.29■■■■■ 4.04
PRKCD-203ENST00000464818 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
PRKCD-203ENST00000464818 ABCC9O60706 1549 aa34.72■■■■□ 3.15
PRKCD-203ENST00000464818 DCAF8L2P0C7V8 631 aa33.64■■■□□ 2.98
PRKCD-203ENST00000464818 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
PRKCD-203ENST00000464818 RB1CC1Q8TDY2 1594 aa33.53■■■□□ 2.96
PRKCD-203ENST00000464818 NACADO15069 1562 aa33.52■■■□□ 2.96
PRKCD-203ENST00000464818 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
PRKCD-203ENST00000464818 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
PRKCD-203ENST00000464818 UNC13AQ9UPW8 1703 aa32.85■■■□□ 2.85
PRKCD-203ENST00000464818 SCRIBQ14160 1630 aa32.73■■■□□ 2.83
PRKCD-203ENST00000464818 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
PRKCD-203ENST00000464818 BICRAQ9NZM4 1560 aa32.43■■■□□ 2.78
PRKCD-203ENST00000464818 SHROOM4Q9ULL8 1493 aa32.12■■■□□ 2.73
PRKCD-203ENST00000464818 EIF4G1Q04637 1599 aaKnown RBP31.6■■■□□ 2.65
PRKCD-203ENST00000464818 DNAJC5BQ9UF47 199 aa31.44■■■□□ 2.62
PRKCD-203ENST00000464818 CC2D2AQ9P2K1 1620 aa31.42■■■□□ 2.62
PRKCD-203ENST00000464818 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
PRKCD-203ENST00000464818 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
PRKCD-203ENST00000464818 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.59
PRKCD-203ENST00000464818 MROH2BQ7Z745 1585 aa31.07■■■□□ 2.56
PRKCD-203ENST00000464818 SMARCA2P51531 1590 aa31■■■□□ 2.55
PRKCD-203ENST00000464818 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.54
PRKCD-203ENST00000464818 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
PRKCD-203ENST00000464818 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
PRKCD-203ENST00000464818 WIZO95785 1651 aa30.81■■■□□ 2.52
PRKCD-203ENST00000464818 HMGXB3Q12766 1538 aa30.81■■■□□ 2.52
PRKCD-203ENST00000464818 BAZ1BQ9UIG0 1483 aaKnown RBP30.8■■■□□ 2.52
PRKCD-203ENST00000464818 RSF1Q96T23 1441 aaPredicted RBP30.77■■■□□ 2.52
PRKCD-203ENST00000464818 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
PRKCD-203ENST00000464818 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
PRKCD-203ENST00000464818 NESP48681 1621 aa30.1■■■□□ 2.41
PRKCD-203ENST00000464818 LAMC3Q9Y6N6 1575 aa30.09■■■□□ 2.41
PRKCD-203ENST00000464818 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
PRKCD-203ENST00000464818 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
PRKCD-203ENST00000464818 ERCC6Q03468 1493 aa29.97■■■□□ 2.39
PRKCD-203ENST00000464818 PRDM2Q13029 1718 aa29.88■■■□□ 2.37
PRKCD-203ENST00000464818 CFTRP13569 1480 aa29.87■■■□□ 2.37
PRKCD-203ENST00000464818 KIF21AQ7Z4S6 1674 aa29.86■■■□□ 2.37
PRKCD-203ENST00000464818 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
PRKCD-203ENST00000464818 FANCD2Q9BXW9 1451 aa29.71■■■□□ 2.35
PRKCD-203ENST00000464818 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
PRKCD-203ENST00000464818 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
PRKCD-203ENST00000464818 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
PRKCD-203ENST00000464818 CUX2O14529 1486 aa29.45■■■□□ 2.31
PRKCD-203ENST00000464818 WDR62O43379 1518 aa29.43■■■□□ 2.3
PRKCD-203ENST00000464818 URB2Q14146 1524 aaKnown RBP29.37■■■□□ 2.29
PRKCD-203ENST00000464818 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
PRKCD-203ENST00000464818 ABCC8Q09428 1581 aa29.26■■■□□ 2.28
PRKCD-203ENST00000464818 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
PRKCD-203ENST00000464818 CUX1P39880 1505 aa29.15■■■□□ 2.26
PRKCD-203ENST00000464818 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
PRKCD-203ENST00000464818 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
PRKCD-203ENST00000464818 FGD5Q6ZNL6 1462 aa29.03■■■□□ 2.24
PRKCD-203ENST00000464818 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
PRKCD-203ENST00000464818 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
PRKCD-203ENST00000464818 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
PRKCD-203ENST00000464818 TOP2BQ02880 1626 aa29■■■□□ 2.23
PRKCD-203ENST00000464818 TARBP1Q13395 1621 aaKnown RBP28.92■■■□□ 2.22
PRKCD-203ENST00000464818 SOGA1O94964 1423 aa28.9■■■□□ 2.22
PRKCD-203ENST00000464818 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
PRKCD-203ENST00000464818 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
PRKCD-203ENST00000464818 EIF4G3O43432 1585 aaKnown RBP28.83■■■□□ 2.21
PRKCD-203ENST00000464818 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
PRKCD-203ENST00000464818 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
PRKCD-203ENST00000464818 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.191e-6■■■■□ 25.1
PRKCD-203ENST00000464818 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.18
PRKCD-203ENST00000464818 PBRM1Q86U86 1689 aa28.64■■■□□ 2.18
PRKCD-203ENST00000464818 ABCA5Q8WWZ7 1642 aa28.63■■■□□ 2.17
PRKCD-203ENST00000464818 GAPVD1Q14C86 1478 aa28.6■■■□□ 2.17
PRKCD-203ENST00000464818 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
PRKCD-203ENST00000464818 GRIN2BQ13224 1484 aa28.55■■■□□ 2.16
PRKCD-203ENST00000464818 SNAPC4Q5SXM2 1469 aa28.51■■■□□ 2.15
PRKCD-203ENST00000464818 CHD1O14646 1710 aa28.46■■■□□ 2.15
PRKCD-203ENST00000464818 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
PRKCD-203ENST00000464818 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
PRKCD-203ENST00000464818 ERICH3Q5RHP9 1530 aa28.4■■■□□ 2.14
PRKCD-203ENST00000464818 FBLN2P98095 1184 aa28.39■■■□□ 2.14
PRKCD-203ENST00000464818 ADAMTS12P58397 1594 aa28.37■■■□□ 2.13
PRKCD-203ENST00000464818 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
PRKCD-203ENST00000464818 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
PRKCD-203ENST00000464818 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
PRKCD-203ENST00000464818 CUL7Q14999 1698 aa28.29■■■□□ 2.12
PRKCD-203ENST00000464818 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
PRKCD-203ENST00000464818 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
PRKCD-203ENST00000464818 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
PRKCD-203ENST00000464818 IGF1RP08069 1367 aa28.2■■■□□ 2.1
PRKCD-203ENST00000464818 GRIN2AQ12879 1464 aa28.19■■■□□ 2.1
PRKCD-203ENST00000464818 DNAJC5Q9H3Z4 198 aa28.11■■■□□ 2.09
PRKCD-203ENST00000464818 CARMIL1Q5VZK9 1371 aa28.11■■■□□ 2.09
PRKCD-203ENST00000464818 EEA1Q15075 1411 aa28.09■■■□□ 2.09
PRKCD-203ENST00000464818 CEP170Q5SW79 1584 aa28.06■■■□□ 2.08
PRKCD-203ENST00000464818 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
PRKCD-203ENST00000464818 CLASP1Q7Z460 1538 aa28.02■■■□□ 2.08
PRKCD-203ENST00000464818 RAPGEF2Q9Y4G8 1499 aa28■■■□□ 2.07
PRKCD-203ENST00000464818 NUP160Q12769 1436 aa28■■■□□ 2.07
PRKCD-203ENST00000464818 CSRNP3Q8WYN3 585 aa27.96■■■□□ 2.07
PRKCD-203ENST00000464818 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
PRKCD-203ENST00000464818 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
PRKCD-203ENST00000464818 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms