RNA–Protein interactions for RNA: ENST00000464699.5

KRTCAP3-205, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 724 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-205ENST00000464699 NISCHQ9Y2I1 1504 aa61.48■■■■■ 7.43
KRTCAP3-205ENST00000464699 CCDC180Q9P1Z9 1646 aa54.69■■■■■ 6.35
KRTCAP3-205ENST00000464699 ABCC9O60706 1549 aa54.44■■■■■ 6.3
KRTCAP3-205ENST00000464699 RB1CC1Q8TDY2 1594 aa51.71■■■■■ 5.87
KRTCAP3-205ENST00000464699 DCAF8L2P0C7V8 631 aa51.52■■■■■ 5.84
KRTCAP3-205ENST00000464699 NACADO15069 1562 aa51.45■■■■■ 5.83
KRTCAP3-205ENST00000464699 DNAJC5BQ9UF47 199 aa51.39■■■■■ 5.82
KRTCAP3-205ENST00000464699 ZCCHC6Q5VYS8 1495 aaKnown RBP51.16■■■■■ 5.78
KRTCAP3-205ENST00000464699 MYO15BQ96JP2 1530 aa51.08■■■■■ 5.77
KRTCAP3-205ENST00000464699 DCAF1Q9Y4B6 1507 aa50.82■■■■■ 5.73
KRTCAP3-205ENST00000464699 UNC13AQ9UPW8 1703 aa50.59■■■■■ 5.69
KRTCAP3-205ENST00000464699 PABPN1Q86U42 306 aaKnown RBP eCLIP50.53■■■■■ 5.68
KRTCAP3-205ENST00000464699 BICRAQ9NZM4 1560 aa50.26■■■■■ 5.64
KRTCAP3-205ENST00000464699 SCRIBQ14160 1630 aa49.91■■■■■ 5.58
KRTCAP3-205ENST00000464699 SHROOM4Q9ULL8 1493 aa49.61■■■■■ 5.53
KRTCAP3-205ENST00000464699 CC2D2AQ9P2K1 1620 aa49.22■■■■■ 5.47
KRTCAP3-205ENST00000464699 CECR2Q9BXF3 1484 aa49.11■■■■■ 5.45
KRTCAP3-205ENST00000464699 EIF4G1Q04637 1599 aaKnown RBP49.04■■■■■ 5.44
KRTCAP3-205ENST00000464699 SMARCA4P51532 1647 aa47.73■■■■■ 5.23
KRTCAP3-205ENST00000464699 BAZ1AQ9NRL2 1556 aaPredicted RBP47.65■■■■■ 5.22
KRTCAP3-205ENST00000464699 ATAD2BQ9ULI0 1458 aa47.49■■■■■ 5.19
KRTCAP3-205ENST00000464699 DNAJC5Q9H3Z4 198 aa47.49■■■■■ 5.19
KRTCAP3-205ENST00000464699 NCAPD3P42695 1498 aa47.48■■■■■ 5.19
KRTCAP3-205ENST00000464699 SMARCA2P51531 1590 aa47.42■■■■■ 5.18
KRTCAP3-205ENST00000464699 MROH2BQ7Z745 1585 aa47.38■■■■■ 5.18
KRTCAP3-205ENST00000464699 PEG3Q9GZU2 1588 aa47.24■■■■■ 5.15
KRTCAP3-205ENST00000464699 HMGXB3Q12766 1538 aa47.21■■■■■ 5.15
KRTCAP3-205ENST00000464699 CUX2O14529 1486 aa47.16■■■■■ 5.14
KRTCAP3-205ENST00000464699 BAZ1BQ9UIG0 1483 aaKnown RBP47.09■■■■■ 5.13
KRTCAP3-205ENST00000464699 ERCC6Q03468 1493 aa47.01■■■■■ 5.12
KRTCAP3-205ENST00000464699 WIZO95785 1651 aa46.9■■■■■ 5.1
KRTCAP3-205ENST00000464699 RSF1Q96T23 1441 aaPredicted RBP46.8■■■■■ 5.08
KRTCAP3-205ENST00000464699 NESP48681 1621 aa46.67■■■■■ 5.06
KRTCAP3-205ENST00000464699 THOC2Q8NI27 1593 aaKnown RBP46.38■■■■■ 5.01
KRTCAP3-205ENST00000464699 LAMC3Q9Y6N6 1575 aa46.35■■■■■ 5.01
KRTCAP3-205ENST00000464699 TOP2AP11388 1531 aaKnown RBP46.34■■■■■ 5.01
KRTCAP3-205ENST00000464699 KIF21AQ7Z4S6 1674 aa46.11■■■■■ 4.97
KRTCAP3-205ENST00000464699 CADPSQ9ULU8 1353 aa46.1■■■■■ 4.97
KRTCAP3-205ENST00000464699 PDS5BQ9NTI5 1447 aa46.03■■■■■ 4.96
KRTCAP3-205ENST00000464699 CCDC88BA6NC98 1476 aa45.83■■■■■ 4.93
KRTCAP3-205ENST00000464699 CFTRP13569 1480 aa45.79■■■■■ 4.92
KRTCAP3-205ENST00000464699 MRC2Q9UBG0 1479 aa45.69■■■■■ 4.91
KRTCAP3-205ENST00000464699 WDR62O43379 1518 aa45.65■■■■■ 4.9
KRTCAP3-205ENST00000464699 SUPT5HO00267 1087 aaKnown RBP45.62■■■■■ 4.89
KRTCAP3-205ENST00000464699 FANCD2Q9BXW9 1451 aa45.57■■■■■ 4.89
KRTCAP3-205ENST00000464699 CEP164Q9UPV0 1460 aa45.51■■■■■ 4.88
KRTCAP3-205ENST00000464699 PRDM2Q13029 1718 aa45.48■■■■■ 4.87
KRTCAP3-205ENST00000464699 TRIM41Q8WV44 630 aa45.13■■■■■ 4.82
KRTCAP3-205ENST00000464699 URB2Q14146 1524 aaKnown RBP45.11■■■■■ 4.81
KRTCAP3-205ENST00000464699 ABCC8Q09428 1581 aa44.83■■■■■ 4.77
KRTCAP3-205ENST00000464699 TOPBP1Q92547 1522 aa44.83■■■■■ 4.77
KRTCAP3-205ENST00000464699 OSCARQ8IYS5 282 aa44.8■■■■■ 4.76
KRTCAP3-205ENST00000464699 DNMBPQ6XZF7 1577 aa44.76■■■■■ 4.76
KRTCAP3-205ENST00000464699 IFT140Q96RY7 1462 aa44.56■■■■■ 4.72
KRTCAP3-205ENST00000464699 ZNF608Q9ULD9 1512 aaPredicted RBP44.49■■■■■ 4.71
KRTCAP3-205ENST00000464699 CUX1P39880 1505 aa44.45■■■■■ 4.71
KRTCAP3-205ENST00000464699 POLA1P09884 1462 aaPredicted RBP44.43■■■■■ 4.7
KRTCAP3-205ENST00000464699 RIMBP3CA6NJZ7 1639 aa44.39■■■■■ 4.7
KRTCAP3-205ENST00000464699 RIMBP3BA6NNM3 1639 aa44.39■■■■■ 4.7
KRTCAP3-205ENST00000464699 RIMBP3Q9UFD9 1639 aa44.39■■■■■ 4.7
KRTCAP3-205ENST00000464699 TARBP1Q13395 1621 aaKnown RBP44.35■■■■■ 4.69
KRTCAP3-205ENST00000464699 FGD5Q6ZNL6 1462 aa44.33■■■■■ 4.69
KRTCAP3-205ENST00000464699 SOGA1O94964 1423 aa44.29■■■■■ 4.68
KRTCAP3-205ENST00000464699 RAD54L2Q9Y4B4 1467 aa44.27■■■■■ 4.68
KRTCAP3-205ENST00000464699 EIF4G3O43432 1585 aaKnown RBP44.27■■■■■ 4.68
KRTCAP3-205ENST00000464699 ARHGEF11O15085 1522 aa44.2■■■■■ 4.67
KRTCAP3-205ENST00000464699 AQRO60306 1485 aaKnown RBP eCLIP44.15■■■■■ 4.66
KRTCAP3-205ENST00000464699 WRNQ14191 1432 aaPredicted RBP eCLIP44.14■■■■■ 4.66
KRTCAP3-205ENST00000464699 TDRD9Q8NDG6 1382 aaKnown RBP44.05■■■■■ 4.64
KRTCAP3-205ENST00000464699 TOP2BQ02880 1626 aa44.04■■■■■ 4.64
KRTCAP3-205ENST00000464699 BIVM-ERCC5R4GMW8 1640 aa44.04■■■■■ 4.64
KRTCAP3-205ENST00000464699 SYNJ1O43426 1573 aa44.02■■■■■ 4.64
KRTCAP3-205ENST00000464699 CHD1O14646 1710 aa44■■■■■ 4.63
KRTCAP3-205ENST00000464699 WDR97A6NE52 1622 aa43.96■■■■■ 4.63
KRTCAP3-205ENST00000464699 ABCA10Q8WWZ4 1543 aa43.88■■■■■ 4.61
KRTCAP3-205ENST00000464699 GRIN2BQ13224 1484 aa43.76■■■■■ 4.6
KRTCAP3-205ENST00000464699 GAPVD1Q14C86 1478 aa43.76■■■■■ 4.6
KRTCAP3-205ENST00000464699 ARAP1Q96P48 1450 aa43.75■■■■■ 4.59
KRTCAP3-205ENST00000464699 CYB5RLQ6IPT4 315 aa43.74■■■■■ 4.59
KRTCAP3-205ENST00000464699 SNAPC4Q5SXM2 1469 aa43.7■■■■■ 4.59
KRTCAP3-205ENST00000464699 ABCA5Q8WWZ7 1642 aa43.7■■■■■ 4.59
KRTCAP3-205ENST00000464699 FBLN2P98095 1184 aa43.68■■■■■ 4.58
KRTCAP3-205ENST00000464699 PBRM1Q86U86 1689 aa43.68■■■■■ 4.58
KRTCAP3-205ENST00000464699 MAGI1Q96QZ7 1491 aaPredicted RBP43.64■■■■■ 4.58
KRTCAP3-205ENST00000464699 CLASP1Q7Z460 1538 aa43.53■■■■■ 4.56
KRTCAP3-205ENST00000464699 CHMP7Q8WUX9 453 aaPredicted RBP43.53■■■■■ 4.56
KRTCAP3-205ENST00000464699 SYNJ2O15056 1496 aa43.47■■■■■ 4.55
KRTCAP3-205ENST00000464699 TRHP20396 242 aaPredicted RBP43.35■■■■■ 4.53
KRTCAP3-205ENST00000464699 ERICH3Q5RHP9 1530 aa43.35■■■■■ 4.53
KRTCAP3-205ENST00000464699 ADAMTS12P58397 1594 aa43.29■■■■■ 4.52
KRTCAP3-205ENST00000464699 FHAD1B1AJZ9 1412 aa43.24■■■■■ 4.51
KRTCAP3-205ENST00000464699 KIF27Q86VH2 1401 aa43.23■■■■■ 4.51
KRTCAP3-205ENST00000464699 GRIN2AQ12879 1464 aa43.19■■■■■ 4.5
KRTCAP3-205ENST00000464699 IGF1RP08069 1367 aa43.08■■■■■ 4.49
KRTCAP3-205ENST00000464699 NUP160Q12769 1436 aa42.99■■■■■ 4.47
KRTCAP3-205ENST00000464699 CEP170Q5SW79 1584 aa42.98■■■■■ 4.47
KRTCAP3-205ENST00000464699 CUL7Q14999 1698 aa42.95■■■■■ 4.47
KRTCAP3-205ENST00000464699 RUSC2Q8N2Y8 1516 aa42.83■■■■■ 4.45
KRTCAP3-205ENST00000464699 CARMIL1Q5VZK9 1371 aa42.83■■■■■ 4.45
KRTCAP3-205ENST00000464699 ERCC6L2Q5T890 1561 aa42.77■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms