RNA–Protein interactions for RNA: ENST00000464573.2

RN7SL299P-201, Transcript of RNA, 7SL, cytoplasmic 299, pseudogene, humanhuman

BASIC

Gene RN7SL299P, Length 280 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL299P-201ENST00000464573 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
RN7SL299P-201ENST00000464573 CCDC180Q9P1Z9 1646 aa24.69■■□□□ 1.54
RN7SL299P-201ENST00000464573 ABCC9O60706 1549 aa24.37■■□□□ 1.49
RN7SL299P-201ENST00000464573 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
RN7SL299P-201ENST00000464573 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
RN7SL299P-201ENST00000464573 NACADO15069 1562 aa23.36■■□□□ 1.33
RN7SL299P-201ENST00000464573 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
RN7SL299P-201ENST00000464573 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
RN7SL299P-201ENST00000464573 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
RN7SL299P-201ENST00000464573 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
RN7SL299P-201ENST00000464573 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
RN7SL299P-201ENST00000464573 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
RN7SL299P-201ENST00000464573 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
RN7SL299P-201ENST00000464573 SHROOM4Q9ULL8 1493 aa22.5■■□□□ 1.19
RN7SL299P-201ENST00000464573 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
RN7SL299P-201ENST00000464573 EIF4G1Q04637 1599 aaKnown RBP22.06■■□□□ 1.12
RN7SL299P-201ENST00000464573 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
RN7SL299P-201ENST00000464573 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
RN7SL299P-201ENST00000464573 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
RN7SL299P-201ENST00000464573 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
RN7SL299P-201ENST00000464573 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.04
RN7SL299P-201ENST00000464573 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
RN7SL299P-201ENST00000464573 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
RN7SL299P-201ENST00000464573 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
RN7SL299P-201ENST00000464573 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
RN7SL299P-201ENST00000464573 BAZ1BQ9UIG0 1483 aaKnown RBP21.4■■□□□ 1.02
RN7SL299P-201ENST00000464573 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
RN7SL299P-201ENST00000464573 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
RN7SL299P-201ENST00000464573 WIZO95785 1651 aa21.12■□□□□ 0.97
RN7SL299P-201ENST00000464573 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
RN7SL299P-201ENST00000464573 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
RN7SL299P-201ENST00000464573 NESP48681 1621 aa21.01■□□□□ 0.95
RN7SL299P-201ENST00000464573 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
RN7SL299P-201ENST00000464573 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
RN7SL299P-201ENST00000464573 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
RN7SL299P-201ENST00000464573 CUX2O14529 1486 aa20.88■□□□□ 0.93
RN7SL299P-201ENST00000464573 CFTRP13569 1480 aa20.82■□□□□ 0.92
RN7SL299P-201ENST00000464573 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
RN7SL299P-201ENST00000464573 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
RN7SL299P-201ENST00000464573 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
RN7SL299P-201ENST00000464573 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
RN7SL299P-201ENST00000464573 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
RN7SL299P-201ENST00000464573 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
RN7SL299P-201ENST00000464573 KIF21AQ7Z4S6 1674 aa20.62■□□□□ 0.89
RN7SL299P-201ENST00000464573 WDR62O43379 1518 aa20.55■□□□□ 0.88
RN7SL299P-201ENST00000464573 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
RN7SL299P-201ENST00000464573 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
RN7SL299P-201ENST00000464573 DNAJC5Q9H3Z4 198 aa20.44■□□□□ 0.86
RN7SL299P-201ENST00000464573 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
RN7SL299P-201ENST00000464573 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
RN7SL299P-201ENST00000464573 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
RN7SL299P-201ENST00000464573 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
RN7SL299P-201ENST00000464573 SOGA1O94964 1423 aa20.18■□□□□ 0.82
RN7SL299P-201ENST00000464573 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
RN7SL299P-201ENST00000464573 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
RN7SL299P-201ENST00000464573 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
RN7SL299P-201ENST00000464573 CUX1P39880 1505 aa20.11■□□□□ 0.81
RN7SL299P-201ENST00000464573 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
RN7SL299P-201ENST00000464573 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
RN7SL299P-201ENST00000464573 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.8
RN7SL299P-201ENST00000464573 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
RN7SL299P-201ENST00000464573 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
RN7SL299P-201ENST00000464573 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
RN7SL299P-201ENST00000464573 FBLN2P98095 1184 aa19.97■□□□□ 0.79
RN7SL299P-201ENST00000464573 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
RN7SL299P-201ENST00000464573 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
RN7SL299P-201ENST00000464573 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
RN7SL299P-201ENST00000464573 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
RN7SL299P-201ENST00000464573 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
RN7SL299P-201ENST00000464573 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
RN7SL299P-201ENST00000464573 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.77
RN7SL299P-201ENST00000464573 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
RN7SL299P-201ENST00000464573 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
RN7SL299P-201ENST00000464573 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
RN7SL299P-201ENST00000464573 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
RN7SL299P-201ENST00000464573 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
RN7SL299P-201ENST00000464573 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
RN7SL299P-201ENST00000464573 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
RN7SL299P-201ENST00000464573 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
RN7SL299P-201ENST00000464573 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
RN7SL299P-201ENST00000464573 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
RN7SL299P-201ENST00000464573 CHD1O14646 1710 aa19.64■□□□□ 0.73
RN7SL299P-201ENST00000464573 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
RN7SL299P-201ENST00000464573 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
RN7SL299P-201ENST00000464573 IGF1RP08069 1367 aa19.61■□□□□ 0.73
RN7SL299P-201ENST00000464573 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
RN7SL299P-201ENST00000464573 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
RN7SL299P-201ENST00000464573 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
RN7SL299P-201ENST00000464573 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
RN7SL299P-201ENST00000464573 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
RN7SL299P-201ENST00000464573 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
RN7SL299P-201ENST00000464573 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
RN7SL299P-201ENST00000464573 NUP160Q12769 1436 aa19.54■□□□□ 0.72
RN7SL299P-201ENST00000464573 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
RN7SL299P-201ENST00000464573 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
RN7SL299P-201ENST00000464573 ARAP1Q96P48 1450 aa19.43■□□□□ 0.7
RN7SL299P-201ENST00000464573 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
RN7SL299P-201ENST00000464573 CUL7Q14999 1698 aa19.4■□□□□ 0.7
RN7SL299P-201ENST00000464573 KIAA0586Q9BVV6 1533 aa19.38■□□□□ 0.69
RN7SL299P-201ENST00000464573 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms