RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
ATF3-207ENST00000464547 CCDC180Q9P1Z9 1646 aa18.75■□□□□ 0.59
ATF3-207ENST00000464547 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
ATF3-207ENST00000464547 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
ATF3-207ENST00000464547 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
ATF3-207ENST00000464547 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
ATF3-207ENST00000464547 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
ATF3-207ENST00000464547 ABCC9O60706 1549 aa17.58■□□□□ 0.41
ATF3-207ENST00000464547 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.41
ATF3-207ENST00000464547 NACADO15069 1562 aa17.43■□□□□ 0.38
ATF3-207ENST00000464547 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
ATF3-207ENST00000464547 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
ATF3-207ENST00000464547 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
ATF3-207ENST00000464547 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.3
ATF3-207ENST00000464547 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
ATF3-207ENST00000464547 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
ATF3-207ENST00000464547 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
ATF3-207ENST00000464547 CHIC1Q5VXU3 224 aa16.78■□□□□ 0.28
ATF3-207ENST00000464547 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
ATF3-207ENST00000464547 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
ATF3-207ENST00000464547 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATF3-207ENST00000464547 WIZO95785 1651 aa16.66■□□□□ 0.26
ATF3-207ENST00000464547 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
ATF3-207ENST00000464547 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
ATF3-207ENST00000464547 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
ATF3-207ENST00000464547 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
ATF3-207ENST00000464547 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
ATF3-207ENST00000464547 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
ATF3-207ENST00000464547 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
ATF3-207ENST00000464547 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
ATF3-207ENST00000464547 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
ATF3-207ENST00000464547 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
ATF3-207ENST00000464547 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
ATF3-207ENST00000464547 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
ATF3-207ENST00000464547 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
ATF3-207ENST00000464547 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
ATF3-207ENST00000464547 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
ATF3-207ENST00000464547 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
ATF3-207ENST00000464547 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
ATF3-207ENST00000464547 SOGA1O94964 1423 aa15.85■□□□□ 0.13
ATF3-207ENST00000464547 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
ATF3-207ENST00000464547 EEA1Q15075 1411 aa15.82■□□□□ 0.12
ATF3-207ENST00000464547 CFTRP13569 1480 aa15.82■□□□□ 0.12
ATF3-207ENST00000464547 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
ATF3-207ENST00000464547 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
ATF3-207ENST00000464547 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
ATF3-207ENST00000464547 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
ATF3-207ENST00000464547 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
ATF3-207ENST00000464547 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
ATF3-207ENST00000464547 CUX1P39880 1505 aa15.68■□□□□ 0.1
ATF3-207ENST00000464547 PCGF6Q9BYE7 350 aa15.67■□□□□ 0.1
ATF3-207ENST00000464547 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
ATF3-207ENST00000464547 GOLGA3Q08378 1498 aa15.63■□□□□ 0.09
ATF3-207ENST00000464547 KIF21BO75037 1637 aa15.61■□□□□ 0.09
ATF3-207ENST00000464547 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
ATF3-207ENST00000464547 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
ATF3-207ENST00000464547 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
ATF3-207ENST00000464547 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
ATF3-207ENST00000464547 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
ATF3-207ENST00000464547 NESP48681 1621 aa15.52■□□□□ 0.08
ATF3-207ENST00000464547 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
ATF3-207ENST00000464547 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
ATF3-207ENST00000464547 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
ATF3-207ENST00000464547 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
ATF3-207ENST00000464547 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
ATF3-207ENST00000464547 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.07
ATF3-207ENST00000464547 ERICH3Q5RHP9 1530 aa15.45■□□□□ 0.06
ATF3-207ENST00000464547 HRCP23327 699 aa15.44■□□□□ 0.06
ATF3-207ENST00000464547 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
ATF3-207ENST00000464547 CUX2O14529 1486 aa15.42■□□□□ 0.06
ATF3-207ENST00000464547 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
ATF3-207ENST00000464547 PPARGC1BQ86YN6 1023 aaKnown RBP15.4■□□□□ 0.06
ATF3-207ENST00000464547 CLIP1P30622 1438 aa15.4■□□□□ 0.06
ATF3-207ENST00000464547 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
ATF3-207ENST00000464547 IGF1RP08069 1367 aa15.36■□□□□ 0.05
ATF3-207ENST00000464547 URB2Q14146 1524 aaKnown RBP15.35■□□□□ 0.05
ATF3-207ENST00000464547 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
ATF3-207ENST00000464547 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
ATF3-207ENST00000464547 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
ATF3-207ENST00000464547 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
ATF3-207ENST00000464547 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
ATF3-207ENST00000464547 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
ATF3-207ENST00000464547 RANGAP1P46060 587 aaPredicted RBP15.27■□□□□ 0.04
ATF3-207ENST00000464547 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
ATF3-207ENST00000464547 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
ATF3-207ENST00000464547 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
ATF3-207ENST00000464547 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
ATF3-207ENST00000464547 ARHGAP35Q9NRY4 1499 aa15.17■□□□□ 0.02
ATF3-207ENST00000464547 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
ATF3-207ENST00000464547 CUL7Q14999 1698 aa15.16■□□□□ 0.02
ATF3-207ENST00000464547 TDRD9Q8NDG6 1382 aaKnown RBP15.15■□□□□ 0.02
ATF3-207ENST00000464547 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
ATF3-207ENST00000464547 APLP2Q06481 763 aa15.14■□□□□ 0.01
ATF3-207ENST00000464547 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
ATF3-207ENST00000464547 ZEB1P37275 1124 aaPredicted RBP15.09■□□□□ 0.01
ATF3-207ENST00000464547 WDR62O43379 1518 aa15.08■□□□□ 0.01
ATF3-207ENST00000464547 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
ATF3-207ENST00000464547 CTTNBP2Q8WZ74 1663 aa15.03■□□□□ -0
ATF3-207ENST00000464547 IFT140Q96RY7 1462 aa15.03■□□□□ -0
ATF3-207ENST00000464547 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.018e-7■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms