RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
LST1-220ENST00000464526 CCDC180Q9P1Z9 1646 aa36.98■■■■□ 3.51
LST1-220ENST00000464526 ABCC9O60706 1549 aa35.87■■■■□ 3.33
LST1-220ENST00000464526 ZCCHC6Q5VYS8 1495 aaKnown RBP35.07■■■■□ 3.21
LST1-220ENST00000464526 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
LST1-220ENST00000464526 NACADO15069 1562 aa34.61■■■■□ 3.13
LST1-220ENST00000464526 DCAF1Q9Y4B6 1507 aa34.6■■■■□ 3.13
LST1-220ENST00000464526 RB1CC1Q8TDY2 1594 aa34.54■■■■□ 3.12
LST1-220ENST00000464526 MYO15BQ96JP2 1530 aa34.5■■■■□ 3.11
LST1-220ENST00000464526 SCRIBQ14160 1630 aa33.98■■■■□ 3.03
LST1-220ENST00000464526 UNC13AQ9UPW8 1703 aa33.98■■■■□ 3.03
LST1-220ENST00000464526 BICRAQ9NZM4 1560 aa33.67■■■□□ 2.98
LST1-220ENST00000464526 SHROOM4Q9ULL8 1493 aa33.63■■■□□ 2.97
LST1-220ENST00000464526 PABPN1Q86U42 306 aaKnown RBP eCLIP33.62■■■□□ 2.97
LST1-220ENST00000464526 CECR2Q9BXF3 1484 aa32.75■■■□□ 2.83
LST1-220ENST00000464526 EIF4G1Q04637 1599 aaKnown RBP32.67■■■□□ 2.82
LST1-220ENST00000464526 DNAJC5BQ9UF47 199 aa32.53■■■□□ 2.8
LST1-220ENST00000464526 SMARCA4P51532 1647 aa32.46■■■□□ 2.79
LST1-220ENST00000464526 MROH2BQ7Z745 1585 aa32.43■■■□□ 2.78
LST1-220ENST00000464526 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
LST1-220ENST00000464526 BAZ1AQ9NRL2 1556 aaPredicted RBP32.41■■■□□ 2.78
LST1-220ENST00000464526 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
LST1-220ENST00000464526 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
LST1-220ENST00000464526 WIZO95785 1651 aa32.13■■■□□ 2.73
LST1-220ENST00000464526 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
LST1-220ENST00000464526 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
LST1-220ENST00000464526 NCAPD3P42695 1498 aa31.96■■■□□ 2.71
LST1-220ENST00000464526 HMGXB3Q12766 1538 aa31.87■■■□□ 2.69
LST1-220ENST00000464526 BAZ1BQ9UIG0 1483 aaKnown RBP31.87■■■□□ 2.69
LST1-220ENST00000464526 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
LST1-220ENST00000464526 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
LST1-220ENST00000464526 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
LST1-220ENST00000464526 NESP48681 1621 aa31.25■■■□□ 2.59
LST1-220ENST00000464526 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
LST1-220ENST00000464526 LAMC3Q9Y6N6 1575 aa31.03■■■□□ 2.56
LST1-220ENST00000464526 CFTRP13569 1480 aa31.02■■■□□ 2.56
LST1-220ENST00000464526 KIF21AQ7Z4S6 1674 aa30.86■■■□□ 2.53
LST1-220ENST00000464526 PRDM2Q13029 1718 aa30.83■■■□□ 2.53
LST1-220ENST00000464526 FANCD2Q9BXW9 1451 aa30.77■■■□□ 2.52
LST1-220ENST00000464526 ERCC6Q03468 1493 aa30.75■■■□□ 2.51
LST1-220ENST00000464526 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
LST1-220ENST00000464526 CEP164Q9UPV0 1460 aa30.65■■■□□ 2.5
LST1-220ENST00000464526 THOC2Q8NI27 1593 aaKnown RBP30.6■■■□□ 2.49
LST1-220ENST00000464526 URB2Q14146 1524 aaKnown RBP30.51■■■□□ 2.47
LST1-220ENST00000464526 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
LST1-220ENST00000464526 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
LST1-220ENST00000464526 WDR62O43379 1518 aa30.41■■■□□ 2.46
LST1-220ENST00000464526 CUX1P39880 1505 aa30.38■■■□□ 2.45
LST1-220ENST00000464526 TOPBP1Q92547 1522 aa30.36■■■□□ 2.45
LST1-220ENST00000464526 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
LST1-220ENST00000464526 SYNJ1O43426 1573 aa30.31■■■□□ 2.44
LST1-220ENST00000464526 WRNQ14191 1432 aaPredicted RBP eCLIP30.28■■■□□ 2.44
LST1-220ENST00000464526 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
LST1-220ENST00000464526 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
LST1-220ENST00000464526 CUX2O14529 1486 aa30.16■■■□□ 2.42
LST1-220ENST00000464526 POLA1P09884 1462 aaPredicted RBP30.16■■■□□ 2.42
LST1-220ENST00000464526 FGD5Q6ZNL6 1462 aa30.16■■■□□ 2.42
LST1-220ENST00000464526 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
LST1-220ENST00000464526 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
LST1-220ENST00000464526 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
LST1-220ENST00000464526 SOGA1O94964 1423 aa29.95■■■□□ 2.39
LST1-220ENST00000464526 CHIC1Q5VXU3 224 aa29.94■■■□□ 2.38
LST1-220ENST00000464526 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
LST1-220ENST00000464526 WDR97A6NE52 1622 aa29.92■■■□□ 2.38
LST1-220ENST00000464526 TRIM41Q8WV44 630 aa29.87■■■□□ 2.37
LST1-220ENST00000464526 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
LST1-220ENST00000464526 TDRD9Q8NDG6 1382 aaKnown RBP29.82■■■□□ 2.36
LST1-220ENST00000464526 EIF4G3O43432 1585 aaKnown RBP29.82■■■□□ 2.36
LST1-220ENST00000464526 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
LST1-220ENST00000464526 ABCA5Q8WWZ7 1642 aa29.73■■■□□ 2.35
LST1-220ENST00000464526 RUSC2Q8N2Y8 1516 aa29.68■■■□□ 2.34
LST1-220ENST00000464526 GAPVD1Q14C86 1478 aa29.63■■■□□ 2.33
LST1-220ENST00000464526 PBRM1Q86U86 1689 aa29.62■■■□□ 2.33
LST1-220ENST00000464526 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
LST1-220ENST00000464526 GRIN2BQ13224 1484 aa29.52■■■□□ 2.32
LST1-220ENST00000464526 SNAPC4Q5SXM2 1469 aa29.52■■■□□ 2.32
LST1-220ENST00000464526 ERICH3Q5RHP9 1530 aa29.43■■■□□ 2.3
LST1-220ENST00000464526 IGF1RP08069 1367 aa29.42■■■□□ 2.3
LST1-220ENST00000464526 FAM9AQ8IZU1 332 aaPredicted RBP29.41■■■□□ 2.3
LST1-220ENST00000464526 ADAMTS12P58397 1594 aa29.41■■■□□ 2.3
LST1-220ENST00000464526 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
LST1-220ENST00000464526 CHD1O14646 1710 aa29.35■■■□□ 2.29
LST1-220ENST00000464526 SYNJ2O15056 1496 aa29.29■■■□□ 2.28
LST1-220ENST00000464526 CUL7Q14999 1698 aa29.27■■■□□ 2.28
LST1-220ENST00000464526 FHAD1B1AJZ9 1412 aa29.27■■■□□ 2.28
LST1-220ENST00000464526 FBLN2P98095 1184 aa29.27■■■□□ 2.28
LST1-220ENST00000464526 CARMIL1Q5VZK9 1371 aa29.22■■■□□ 2.27
LST1-220ENST00000464526 EEA1Q15075 1411 aa29.22■■■□□ 2.27
LST1-220ENST00000464526 GRIN2AQ12879 1464 aa29.2■■■□□ 2.27
LST1-220ENST00000464526 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.27
LST1-220ENST00000464526 PRXQ9BXM0 1461 aa29.19■■■□□ 2.26
LST1-220ENST00000464526 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
LST1-220ENST00000464526 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
LST1-220ENST00000464526 RAPGEF2Q9Y4G8 1499 aa29.12■■■□□ 2.25
LST1-220ENST00000464526 EHMT2Q96KQ7 1210 aa29.1■■■□□ 2.25
LST1-220ENST00000464526 NUP160Q12769 1436 aa29.04■■■□□ 2.24
LST1-220ENST00000464526 KIF21BO75037 1637 aa29.04■■■□□ 2.24
LST1-220ENST00000464526 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
LST1-220ENST00000464526 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
LST1-220ENST00000464526 GOLGA3Q08378 1498 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms