RNA–Protein interactions for RNA: ENST00000464513.2

RPL7AP28-201, Transcript of ribosomal protein L7a pseudogene 28, humanhuman

BASIC

Gene RPL7AP28, Length 571 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL7AP28-201ENST00000464513 NISCHQ9Y2I1 1504 aa11.6□□□□□ -0.55
RPL7AP28-201ENST00000464513 ABCC9O60706 1549 aa11.38□□□□□ -0.59
RPL7AP28-201ENST00000464513 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
RPL7AP28-201ENST00000464513 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
RPL7AP28-201ENST00000464513 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.68
RPL7AP28-201ENST00000464513 RB1CC1Q8TDY2 1594 aa10.51□□□□□ -0.73
RPL7AP28-201ENST00000464513 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
RPL7AP28-201ENST00000464513 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
RPL7AP28-201ENST00000464513 BICRAQ9NZM4 1560 aa10.38□□□□□ -0.75
RPL7AP28-201ENST00000464513 CC2D2AQ9P2K1 1620 aa10.29□□□□□ -0.76
RPL7AP28-201ENST00000464513 CECR2Q9BXF3 1484 aa10.29□□□□□ -0.76
RPL7AP28-201ENST00000464513 NACADO15069 1562 aa10.26□□□□□ -0.77
RPL7AP28-201ENST00000464513 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
RPL7AP28-201ENST00000464513 CUX2O14529 1486 aa10.05□□□□□ -0.8
RPL7AP28-201ENST00000464513 TRIM41Q8WV44 630 aa10□□□□□ -0.81
RPL7AP28-201ENST00000464513 SHROOM4Q9ULL8 1493 aa9.98□□□□□ -0.81
RPL7AP28-201ENST00000464513 MYO15BQ96JP2 1530 aa9.88□□□□□ -0.83
RPL7AP28-201ENST00000464513 DCAF8L2P0C7V8 631 aa9.87□□□□□ -0.83
RPL7AP28-201ENST00000464513 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
RPL7AP28-201ENST00000464513 SCRIBQ14160 1630 aa9.77□□□□□ -0.85
RPL7AP28-201ENST00000464513 THOC2Q8NI27 1593 aaKnown RBP9.74□□□□□ -0.85
RPL7AP28-201ENST00000464513 NESP48681 1621 aa9.64□□□□□ -0.87
RPL7AP28-201ENST00000464513 CHIC1Q5VXU3 224 aa9.62□□□□□ -0.87
RPL7AP28-201ENST00000464513 BAZ1AQ9NRL2 1556 aaPredicted RBP9.57□□□□□ -0.88
RPL7AP28-201ENST00000464513 KIF21AQ7Z4S6 1674 aa9.56□□□□□ -0.88
RPL7AP28-201ENST00000464513 RIMBP3CA6NJZ7 1639 aa9.55□□□□□ -0.88
RPL7AP28-201ENST00000464513 RIMBP3BA6NNM3 1639 aa9.55□□□□□ -0.88
RPL7AP28-201ENST00000464513 RIMBP3Q9UFD9 1639 aa9.55□□□□□ -0.88
RPL7AP28-201ENST00000464513 SMARCA2P51531 1590 aa9.54□□□□□ -0.88
RPL7AP28-201ENST00000464513 DCAF1Q9Y4B6 1507 aa9.52□□□□□ -0.88
RPL7AP28-201ENST00000464513 ZCCHC6Q5VYS8 1495 aaKnown RBP9.5□□□□□ -0.89
RPL7AP28-201ENST00000464513 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
RPL7AP28-201ENST00000464513 NCAPD3P42695 1498 aa9.47□□□□□ -0.89
RPL7AP28-201ENST00000464513 LAMC3Q9Y6N6 1575 aa9.4□□□□□ -0.9
RPL7AP28-201ENST00000464513 ARHGEF11O15085 1522 aa9.39□□□□□ -0.91
RPL7AP28-201ENST00000464513 HMGXB3Q12766 1538 aa9.39□□□□□ -0.91
RPL7AP28-201ENST00000464513 WDR62O43379 1518 aa9.36□□□□□ -0.91
RPL7AP28-201ENST00000464513 ATAD2BQ9ULI0 1458 aa9.36□□□□□ -0.91
RPL7AP28-201ENST00000464513 ILDR1Q86SU0 546 aaPredicted RBP9.36□□□□□ -0.91
RPL7AP28-201ENST00000464513 OSCARQ8IYS5 282 aa9.35□□□□□ -0.91
RPL7AP28-201ENST00000464513 MRC2Q9UBG0 1479 aa9.3□□□□□ -0.92
RPL7AP28-201ENST00000464513 TRHP20396 242 aaPredicted RBP9.28□□□□□ -0.92
RPL7AP28-201ENST00000464513 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
RPL7AP28-201ENST00000464513 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
RPL7AP28-201ENST00000464513 SMARCA4P51532 1647 aa9.25□□□□□ -0.93
RPL7AP28-201ENST00000464513 CYB5RLQ6IPT4 315 aa9.21□□□□□ -0.94
RPL7AP28-201ENST00000464513 BAZ1BQ9UIG0 1483 aaKnown RBP9.2□□□□□ -0.94
RPL7AP28-201ENST00000464513 PEG3Q9GZU2 1588 aa9.16□□□□□ -0.94
RPL7AP28-201ENST00000464513 CHD1O14646 1710 aa9.15□□□□□ -0.94
RPL7AP28-201ENST00000464513 CEP164Q9UPV0 1460 aa9.11□□□□□ -0.95
RPL7AP28-201ENST00000464513 CADPSQ9ULU8 1353 aa9.1□□□□□ -0.95
RPL7AP28-201ENST00000464513 URB2Q14146 1524 aaKnown RBP9.09□□□□□ -0.95
RPL7AP28-201ENST00000464513 ZNF608Q9ULD9 1512 aaPredicted RBP9.09□□□□□ -0.95
RPL7AP28-201ENST00000464513 FANCD2Q9BXW9 1451 aa9.05□□□□□ -0.96
RPL7AP28-201ENST00000464513 EIF4G3O43432 1585 aaKnown RBP9.04□□□□□ -0.96
RPL7AP28-201ENST00000464513 RSF1Q96T23 1441 aaPredicted RBP9.04□□□□□ -0.96
RPL7AP28-201ENST00000464513 KIF13AQ9H1H9 1805 aa9□□□□□ -0.97
RPL7AP28-201ENST00000464513 CLASP1Q7Z460 1538 aa8.98□□□□□ -0.97
RPL7AP28-201ENST00000464513 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
RPL7AP28-201ENST00000464513 KDM4FA0A1W2PPD8 638 aa8.96□□□□□ -0.98
RPL7AP28-201ENST00000464513 IFT140Q96RY7 1462 aa8.94□□□□□ -0.98
RPL7AP28-201ENST00000464513 PRDM2Q13029 1718 aa8.92□□□□□ -0.98
RPL7AP28-201ENST00000464513 ERCC6L2Q5T890 1561 aa8.91□□□□□ -0.98
RPL7AP28-201ENST00000464513 CFTRP13569 1480 aa8.91□□□□□ -0.98
RPL7AP28-201ENST00000464513 HECW2Q9P2P5 1572 aa8.9□□□□□ -0.98
RPL7AP28-201ENST00000464513 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
RPL7AP28-201ENST00000464513 WIZO95785 1651 aa8.88□□□□□ -0.99
RPL7AP28-201ENST00000464513 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
RPL7AP28-201ENST00000464513 TOPBP1Q92547 1522 aa8.84□□□□□ -0.99
RPL7AP28-201ENST00000464513 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
RPL7AP28-201ENST00000464513 LMTK3Q96Q04 1460 aa8.83□□□□□ -1
RPL7AP28-201ENST00000464513 SYNJ1O43426 1573 aa8.82□□□□□ -1
RPL7AP28-201ENST00000464513 FBXO41Q8TF61 875 aa8.8□□□□□ -1
RPL7AP28-201ENST00000464513 FBLN2P98095 1184 aa8.79□□□□□ -1
RPL7AP28-201ENST00000464513 ILDR2Q71H61 639 aa8.79□□□□□ -1
RPL7AP28-201ENST00000464513 KDM6BO15054 1643 aa8.78□□□□□ -1
RPL7AP28-201ENST00000464513 SNAPC4Q5SXM2 1469 aa8.77□□□□□ -1
RPL7AP28-201ENST00000464513 SOCS7O14512 581 aa8.75□□□□□ -1.01
RPL7AP28-201ENST00000464513 ADGRL1O94910 1474 aa8.75□□□□□ -1.01
RPL7AP28-201ENST00000464513 DNMBPQ6XZF7 1577 aa8.74□□□□□ -1.01
RPL7AP28-201ENST00000464513 DIP2BQ9P265 1576 aa8.73□□□□□ -1.01
RPL7AP28-201ENST00000464513 TSPOAP1O95153 1857 aa8.72□□□□□ -1.01
RPL7AP28-201ENST00000464513 SYNJ2O15056 1496 aa8.71□□□□□ -1.01
RPL7AP28-201ENST00000464513 POLA1P09884 1462 aaPredicted RBP8.7□□□□□ -1.02
RPL7AP28-201ENST00000464513 RAD54L2Q9Y4B4 1467 aa8.69□□□□□ -1.02
RPL7AP28-201ENST00000464513 ABCC10Q5T3U5 1492 aa8.68□□□□□ -1.02
RPL7AP28-201ENST00000464513 PBRM1Q86U86 1689 aa8.68□□□□□ -1.02
RPL7AP28-201ENST00000464513 CEP170Q5SW79 1584 aa8.67□□□□□ -1.02
RPL7AP28-201ENST00000464513 MAGI1Q96QZ7 1491 aaPredicted RBP8.67□□□□□ -1.02
RPL7AP28-201ENST00000464513 WDR97A6NE52 1622 aa8.66□□□□□ -1.02
RPL7AP28-201ENST00000464513 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
RPL7AP28-201ENST00000464513 TDRD9Q8NDG6 1382 aaKnown RBP8.65□□□□□ -1.02
RPL7AP28-201ENST00000464513 PPRC1Q5VV67 1664 aaKnown RBP8.65□□□□□ -1.03
RPL7AP28-201ENST00000464513 ABCC8Q09428 1581 aa8.65□□□□□ -1.03
RPL7AP28-201ENST00000464513 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
RPL7AP28-201ENST00000464513 MAPKBP1O60336 1514 aa8.62□□□□□ -1.03
RPL7AP28-201ENST00000464513 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
RPL7AP28-201ENST00000464513 SPATA31D1Q6ZQQ2 1576 aa8.6□□□□□ -1.03
RPL7AP28-201ENST00000464513 DISP3Q9P2K9 1392 aa8.6□□□□□ -1.03
RPL7AP28-201ENST00000464513 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms