RNA–Protein interactions for RNA: ENST00000464392.1

HLA-DMA-206, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-206ENST00000464392 NISCHQ9Y2I1 1504 aa39.98■■■■□ 3.99
HLA-DMA-206ENST00000464392 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
HLA-DMA-206ENST00000464392 ABCC9O60706 1549 aa34.71■■■■□ 3.15
HLA-DMA-206ENST00000464392 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
HLA-DMA-206ENST00000464392 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
HLA-DMA-206ENST00000464392 NACADO15069 1562 aa33.36■■■□□ 2.93
HLA-DMA-206ENST00000464392 ZCCHC6Q5VYS8 1495 aaKnown RBP33.28■■■□□ 2.92
HLA-DMA-206ENST00000464392 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
HLA-DMA-206ENST00000464392 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
HLA-DMA-206ENST00000464392 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
HLA-DMA-206ENST00000464392 PABPN1Q86U42 306 aaKnown RBP eCLIP32.51■■■□□ 2.79
HLA-DMA-206ENST00000464392 BICRAQ9NZM4 1560 aa32.37■■■□□ 2.77
HLA-DMA-206ENST00000464392 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
HLA-DMA-206ENST00000464392 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
HLA-DMA-206ENST00000464392 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
HLA-DMA-206ENST00000464392 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
HLA-DMA-206ENST00000464392 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
HLA-DMA-206ENST00000464392 CECR2Q9BXF3 1484 aa31.18■■■□□ 2.58
HLA-DMA-206ENST00000464392 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
HLA-DMA-206ENST00000464392 BAZ1AQ9NRL2 1556 aaPredicted RBP30.95■■■□□ 2.54
HLA-DMA-206ENST00000464392 ATAD2BQ9ULI0 1458 aa30.84■■■□□ 2.53
HLA-DMA-206ENST00000464392 NCAPD3P42695 1498 aa30.82■■■□□ 2.53
HLA-DMA-206ENST00000464392 MROH2BQ7Z745 1585 aa30.81■■■□□ 2.52
HLA-DMA-206ENST00000464392 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
HLA-DMA-206ENST00000464392 PEG3Q9GZU2 1588 aa30.67■■■□□ 2.5
HLA-DMA-206ENST00000464392 HMGXB3Q12766 1538 aa30.61■■■□□ 2.49
HLA-DMA-206ENST00000464392 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
HLA-DMA-206ENST00000464392 RSF1Q96T23 1441 aaPredicted RBP30.5■■■□□ 2.47
HLA-DMA-206ENST00000464392 WIZO95785 1651 aa30.46■■■□□ 2.47
HLA-DMA-206ENST00000464392 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
HLA-DMA-206ENST00000464392 NESP48681 1621 aa30.05■■■□□ 2.4
HLA-DMA-206ENST00000464392 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
HLA-DMA-206ENST00000464392 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
HLA-DMA-206ENST00000464392 ERCC6Q03468 1493 aa29.89■■■□□ 2.38
HLA-DMA-206ENST00000464392 CCDC88BA6NC98 1476 aa29.83■■■□□ 2.37
HLA-DMA-206ENST00000464392 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
HLA-DMA-206ENST00000464392 PDS5BQ9NTI5 1447 aa29.79■■■□□ 2.36
HLA-DMA-206ENST00000464392 CFTRP13569 1480 aa29.75■■■□□ 2.35
HLA-DMA-206ENST00000464392 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
HLA-DMA-206ENST00000464392 FANCD2Q9BXW9 1451 aa29.56■■■□□ 2.32
HLA-DMA-206ENST00000464392 CUX2O14529 1486 aa29.55■■■□□ 2.32
HLA-DMA-206ENST00000464392 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
HLA-DMA-206ENST00000464392 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
HLA-DMA-206ENST00000464392 MRC2Q9UBG0 1479 aa29.45■■■□□ 2.31
HLA-DMA-206ENST00000464392 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
HLA-DMA-206ENST00000464392 WDR62O43379 1518 aa29.34■■■□□ 2.29
HLA-DMA-206ENST00000464392 URB2Q14146 1524 aaKnown RBP29.25■■■□□ 2.27
HLA-DMA-206ENST00000464392 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
HLA-DMA-206ENST00000464392 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
HLA-DMA-206ENST00000464392 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
HLA-DMA-206ENST00000464392 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
HLA-DMA-206ENST00000464392 CUX1P39880 1505 aa28.89■■■□□ 2.21
HLA-DMA-206ENST00000464392 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
HLA-DMA-206ENST00000464392 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
HLA-DMA-206ENST00000464392 SOGA1O94964 1423 aa28.78■■■□□ 2.2
HLA-DMA-206ENST00000464392 ZNF608Q9ULD9 1512 aaPredicted RBP28.78■■■□□ 2.2
HLA-DMA-206ENST00000464392 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
HLA-DMA-206ENST00000464392 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
HLA-DMA-206ENST00000464392 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
HLA-DMA-206ENST00000464392 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
HLA-DMA-206ENST00000464392 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.18
HLA-DMA-206ENST00000464392 TOP2BQ02880 1626 aa28.64■■■□□ 2.18
HLA-DMA-206ENST00000464392 SYNJ1O43426 1573 aa28.63■■■□□ 2.17
HLA-DMA-206ENST00000464392 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
HLA-DMA-206ENST00000464392 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
HLA-DMA-206ENST00000464392 EIF4G3O43432 1585 aaKnown RBP28.59■■■□□ 2.17
HLA-DMA-206ENST00000464392 ABCA10Q8WWZ4 1543 aa28.51■■■□□ 2.15
HLA-DMA-206ENST00000464392 WDR97A6NE52 1622 aa28.49■■■□□ 2.15
HLA-DMA-206ENST00000464392 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
HLA-DMA-206ENST00000464392 GAPVD1Q14C86 1478 aa28.41■■■□□ 2.14
HLA-DMA-206ENST00000464392 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
HLA-DMA-206ENST00000464392 ABCA5Q8WWZ7 1642 aa28.35■■■□□ 2.13
HLA-DMA-206ENST00000464392 SNAPC4Q5SXM2 1469 aa28.33■■■□□ 2.13
HLA-DMA-206ENST00000464392 FBLN2P98095 1184 aa28.32■■■□□ 2.12
HLA-DMA-206ENST00000464392 MAGI1Q96QZ7 1491 aaPredicted RBP28.29■■■□□ 2.12
HLA-DMA-206ENST00000464392 PBRM1Q86U86 1689 aa28.26■■■□□ 2.12
HLA-DMA-206ENST00000464392 CHMP7Q8WUX9 453 aaPredicted RBP28.25■■■□□ 2.11
HLA-DMA-206ENST00000464392 CHD1O14646 1710 aa28.21■■■□□ 2.11
HLA-DMA-206ENST00000464392 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
HLA-DMA-206ENST00000464392 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
HLA-DMA-206ENST00000464392 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
HLA-DMA-206ENST00000464392 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
HLA-DMA-206ENST00000464392 FHAD1B1AJZ9 1412 aa28.09■■■□□ 2.09
HLA-DMA-206ENST00000464392 IGF1RP08069 1367 aa28.08■■■□□ 2.09
HLA-DMA-206ENST00000464392 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
HLA-DMA-206ENST00000464392 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
HLA-DMA-206ENST00000464392 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
HLA-DMA-206ENST00000464392 RUSC2Q8N2Y8 1516 aa27.93■■■□□ 2.06
HLA-DMA-206ENST00000464392 NUP160Q12769 1436 aa27.91■■■□□ 2.06
HLA-DMA-206ENST00000464392 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
HLA-DMA-206ENST00000464392 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
HLA-DMA-206ENST00000464392 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
HLA-DMA-206ENST00000464392 CUL7Q14999 1698 aa27.87■■■□□ 2.05
HLA-DMA-206ENST00000464392 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
HLA-DMA-206ENST00000464392 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
HLA-DMA-206ENST00000464392 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
HLA-DMA-206ENST00000464392 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
HLA-DMA-206ENST00000464392 CYB5RLQ6IPT4 315 aa27.72■■■□□ 2.03
HLA-DMA-206ENST00000464392 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
HLA-DMA-206ENST00000464392 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms