RNA–Protein interactions for RNA: ENST00000464274.5

HCLS1-203, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-203ENST00000464274 NISCHQ9Y2I1 1504 aa38.17■■■■□ 3.7
HCLS1-203ENST00000464274 ABCC9O60706 1549 aa35.05■■■■□ 3.2
HCLS1-203ENST00000464274 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
HCLS1-203ENST00000464274 DNAJC5BQ9UF47 199 aa33.52■■■□□ 2.96
HCLS1-203ENST00000464274 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
HCLS1-203ENST00000464274 NACADO15069 1562 aa32.66■■■□□ 2.82
HCLS1-203ENST00000464274 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
HCLS1-203ENST00000464274 DCAF8L2P0C7V8 631 aa32.63■■■□□ 2.81
HCLS1-203ENST00000464274 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.75
HCLS1-203ENST00000464274 BICRAQ9NZM4 1560 aa32.14■■■□□ 2.74
HCLS1-203ENST00000464274 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
HCLS1-203ENST00000464274 CECR2Q9BXF3 1484 aa31.6■■■□□ 2.65
HCLS1-203ENST00000464274 CC2D2AQ9P2K1 1620 aa31.57■■■□□ 2.64
HCLS1-203ENST00000464274 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
HCLS1-203ENST00000464274 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
HCLS1-203ENST00000464274 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
HCLS1-203ENST00000464274 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
HCLS1-203ENST00000464274 EIF4G1Q04637 1599 aaKnown RBP31.36■■■□□ 2.61
HCLS1-203ENST00000464274 DNAJC5Q9H3Z4 198 aa31.08■■■□□ 2.57
HCLS1-203ENST00000464274 CUX2O14529 1486 aa30.32■■■□□ 2.44
HCLS1-203ENST00000464274 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
HCLS1-203ENST00000464274 ERCC6Q03468 1493 aa30.24■■■□□ 2.43
HCLS1-203ENST00000464274 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
HCLS1-203ENST00000464274 NESP48681 1621 aa29.98■■■□□ 2.39
HCLS1-203ENST00000464274 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
HCLS1-203ENST00000464274 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
HCLS1-203ENST00000464274 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
HCLS1-203ENST00000464274 BAZ1BQ9UIG0 1483 aaKnown RBP29.71■■■□□ 2.35
HCLS1-203ENST00000464274 THOC2Q8NI27 1593 aaKnown RBP29.65■■■□□ 2.34
HCLS1-203ENST00000464274 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
HCLS1-203ENST00000464274 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
HCLS1-203ENST00000464274 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
HCLS1-203ENST00000464274 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
HCLS1-203ENST00000464274 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
HCLS1-203ENST00000464274 KIF21AQ7Z4S6 1674 aa29.46■■■□□ 2.31
HCLS1-203ENST00000464274 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
HCLS1-203ENST00000464274 CADPSQ9ULU8 1353 aa29.32■■■□□ 2.28
HCLS1-203ENST00000464274 MRC2Q9UBG0 1479 aa29.23■■■□□ 2.27
HCLS1-203ENST00000464274 WDR62O43379 1518 aa29.15■■■□□ 2.26
HCLS1-203ENST00000464274 WIZO95785 1651 aa29.04■■■□□ 2.24
HCLS1-203ENST00000464274 OSCARQ8IYS5 282 aa29■■■□□ 2.23
HCLS1-203ENST00000464274 CEP164Q9UPV0 1460 aa28.98■■■□□ 2.23
HCLS1-203ENST00000464274 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
HCLS1-203ENST00000464274 CFTRP13569 1480 aa28.85■■■□□ 2.21
HCLS1-203ENST00000464274 URB2Q14146 1524 aaKnown RBP28.77■■■□□ 2.2
HCLS1-203ENST00000464274 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
HCLS1-203ENST00000464274 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
HCLS1-203ENST00000464274 RIMBP3CA6NJZ7 1639 aa28.56■■■□□ 2.16
HCLS1-203ENST00000464274 RIMBP3BA6NNM3 1639 aa28.56■■■□□ 2.16
HCLS1-203ENST00000464274 RIMBP3Q9UFD9 1639 aa28.56■■■□□ 2.16
HCLS1-203ENST00000464274 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
HCLS1-203ENST00000464274 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
HCLS1-203ENST00000464274 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
HCLS1-203ENST00000464274 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
HCLS1-203ENST00000464274 CCDC88BA6NC98 1476 aa28.37■■■□□ 2.13
HCLS1-203ENST00000464274 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
HCLS1-203ENST00000464274 PRDM2Q13029 1718 aa28.33■■■□□ 2.13
HCLS1-203ENST00000464274 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.11
HCLS1-203ENST00000464274 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
HCLS1-203ENST00000464274 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
HCLS1-203ENST00000464274 ABCC8Q09428 1581 aa28.2■■■□□ 2.1
HCLS1-203ENST00000464274 FBLN2P98095 1184 aa28.18■■■□□ 2.1
HCLS1-203ENST00000464274 ARAP1Q96P48 1450 aa28.14■■■□□ 2.09
HCLS1-203ENST00000464274 DNMBPQ6XZF7 1577 aa28.13■■■□□ 2.09
HCLS1-203ENST00000464274 CHD1O14646 1710 aa28.11■■■□□ 2.09
HCLS1-203ENST00000464274 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
HCLS1-203ENST00000464274 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
HCLS1-203ENST00000464274 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
HCLS1-203ENST00000464274 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
HCLS1-203ENST00000464274 SOGA1O94964 1423 aa27.93■■■□□ 2.06
HCLS1-203ENST00000464274 CHMP7Q8WUX9 453 aaPredicted RBP27.87■■■□□ 2.05
HCLS1-203ENST00000464274 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
HCLS1-203ENST00000464274 CLASP1Q7Z460 1538 aa27.81■■■□□ 2.04
HCLS1-203ENST00000464274 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
HCLS1-203ENST00000464274 AEBP2Q6ZN18 517 aaPredicted RBP27.75■■■□□ 2.03
HCLS1-203ENST00000464274 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
HCLS1-203ENST00000464274 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
HCLS1-203ENST00000464274 GRIN2BQ13224 1484 aa27.69■■■□□ 2.02
HCLS1-203ENST00000464274 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
HCLS1-203ENST00000464274 CUX1P39880 1505 aa27.67■■■□□ 2.02
HCLS1-203ENST00000464274 SYNJ2O15056 1496 aa27.65■■■□□ 2.02
HCLS1-203ENST00000464274 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
HCLS1-203ENST00000464274 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
HCLS1-203ENST00000464274 ERCC6L2Q5T890 1561 aa27.42■■□□□ 1.98
HCLS1-203ENST00000464274 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
HCLS1-203ENST00000464274 ABCA5Q8WWZ7 1642 aa27.37■■□□□ 1.97
HCLS1-203ENST00000464274 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
HCLS1-203ENST00000464274 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
HCLS1-203ENST00000464274 NUP160Q12769 1436 aa27.27■■□□□ 1.96
HCLS1-203ENST00000464274 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
HCLS1-203ENST00000464274 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
HCLS1-203ENST00000464274 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
HCLS1-203ENST00000464274 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
HCLS1-203ENST00000464274 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
HCLS1-203ENST00000464274 JPH4Q96JJ6 628 aa27.11■■□□□ 1.93
HCLS1-203ENST00000464274 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
HCLS1-203ENST00000464274 KIF13AQ9H1H9 1805 aa27.09■■□□□ 1.93
HCLS1-203ENST00000464274 FAM69CQ0P6D2 419 aa27.05■■□□□ 1.92
HCLS1-203ENST00000464274 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
HCLS1-203ENST00000464274 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms