RNA–Protein interactions for RNA: ENST00000464119.1

SREBF2-206, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-206ENST00000464119 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
SREBF2-206ENST00000464119 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
SREBF2-206ENST00000464119 ABCC9O60706 1549 aa24.25■■□□□ 1.47
SREBF2-206ENST00000464119 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
SREBF2-206ENST00000464119 NACADO15069 1562 aa23.5■■□□□ 1.35
SREBF2-206ENST00000464119 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
SREBF2-206ENST00000464119 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
SREBF2-206ENST00000464119 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
SREBF2-206ENST00000464119 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
SREBF2-206ENST00000464119 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
SREBF2-206ENST00000464119 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
SREBF2-206ENST00000464119 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
SREBF2-206ENST00000464119 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
SREBF2-206ENST00000464119 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
SREBF2-206ENST00000464119 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
SREBF2-206ENST00000464119 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
SREBF2-206ENST00000464119 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
SREBF2-206ENST00000464119 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
SREBF2-206ENST00000464119 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
SREBF2-206ENST00000464119 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
SREBF2-206ENST00000464119 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
SREBF2-206ENST00000464119 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
SREBF2-206ENST00000464119 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
SREBF2-206ENST00000464119 SMARCA2P51531 1590 aa21.69■■□□□ 1.06
SREBF2-206ENST00000464119 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
SREBF2-206ENST00000464119 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
SREBF2-206ENST00000464119 RSF1Q96T23 1441 aaPredicted RBP21.58■■□□□ 1.05
SREBF2-206ENST00000464119 WIZO95785 1651 aa21.53■■□□□ 1.04
SREBF2-206ENST00000464119 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
SREBF2-206ENST00000464119 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
SREBF2-206ENST00000464119 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
SREBF2-206ENST00000464119 SUPT5HO00267 1087 aaKnown RBP21.08■□□□□ 0.97
SREBF2-206ENST00000464119 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
SREBF2-206ENST00000464119 NESP48681 1621 aa21.06■□□□□ 0.96
SREBF2-206ENST00000464119 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
SREBF2-206ENST00000464119 CFTRP13569 1480 aa20.97■□□□□ 0.95
SREBF2-206ENST00000464119 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.94
SREBF2-206ENST00000464119 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
SREBF2-206ENST00000464119 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
SREBF2-206ENST00000464119 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
SREBF2-206ENST00000464119 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
SREBF2-206ENST00000464119 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
SREBF2-206ENST00000464119 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
SREBF2-206ENST00000464119 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
SREBF2-206ENST00000464119 WDR62O43379 1518 aa20.63■□□□□ 0.89
SREBF2-206ENST00000464119 CUX2O14529 1486 aa20.63■□□□□ 0.89
SREBF2-206ENST00000464119 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.89
SREBF2-206ENST00000464119 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
SREBF2-206ENST00000464119 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
SREBF2-206ENST00000464119 DNMBPQ6XZF7 1577 aa20.49■□□□□ 0.87
SREBF2-206ENST00000464119 CUX1P39880 1505 aa20.41■□□□□ 0.86
SREBF2-206ENST00000464119 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
SREBF2-206ENST00000464119 WRNQ14191 1432 aaPredicted RBP eCLIP20.32■□□□□ 0.84
SREBF2-206ENST00000464119 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
SREBF2-206ENST00000464119 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
SREBF2-206ENST00000464119 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
SREBF2-206ENST00000464119 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
SREBF2-206ENST00000464119 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
SREBF2-206ENST00000464119 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
SREBF2-206ENST00000464119 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
SREBF2-206ENST00000464119 SOGA1O94964 1423 aa20.22■□□□□ 0.83
SREBF2-206ENST00000464119 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
SREBF2-206ENST00000464119 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
SREBF2-206ENST00000464119 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
SREBF2-206ENST00000464119 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
SREBF2-206ENST00000464119 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
SREBF2-206ENST00000464119 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.815e-11■■■■□ 23.8
SREBF2-206ENST00000464119 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
SREBF2-206ENST00000464119 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
SREBF2-206ENST00000464119 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
SREBF2-206ENST00000464119 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
SREBF2-206ENST00000464119 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
SREBF2-206ENST00000464119 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
SREBF2-206ENST00000464119 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
SREBF2-206ENST00000464119 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
SREBF2-206ENST00000464119 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
SREBF2-206ENST00000464119 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
SREBF2-206ENST00000464119 CHD1O14646 1710 aa19.83■□□□□ 0.77
SREBF2-206ENST00000464119 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
SREBF2-206ENST00000464119 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
SREBF2-206ENST00000464119 IGF1RP08069 1367 aa19.81■□□□□ 0.76
SREBF2-206ENST00000464119 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
SREBF2-206ENST00000464119 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
SREBF2-206ENST00000464119 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
SREBF2-206ENST00000464119 DNAJC5Q9H3Z4 198 aa19.75■□□□□ 0.75
SREBF2-206ENST00000464119 CUL7Q14999 1698 aa19.75■□□□□ 0.75
SREBF2-206ENST00000464119 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
SREBF2-206ENST00000464119 FBLN2P98095 1184 aa19.73■□□□□ 0.75
SREBF2-206ENST00000464119 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
SREBF2-206ENST00000464119 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
SREBF2-206ENST00000464119 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
SREBF2-206ENST00000464119 NUP160Q12769 1436 aa19.65■□□□□ 0.74
SREBF2-206ENST00000464119 EEA1Q15075 1411 aa19.65■□□□□ 0.74
SREBF2-206ENST00000464119 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
SREBF2-206ENST00000464119 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
SREBF2-206ENST00000464119 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.72
SREBF2-206ENST00000464119 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
SREBF2-206ENST00000464119 SHROOM2Q13796 1616 aa19.5■□□□□ 0.71
SREBF2-206ENST00000464119 KIAA0586Q9BVV6 1533 aa19.49■□□□□ 0.71
SREBF2-206ENST00000464119 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms