RNA–Protein interactions for RNA: ENST00000464044.1

LST1-219, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 278 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-219ENST00000464044 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
LST1-219ENST00000464044 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
LST1-219ENST00000464044 ABCC9O60706 1549 aa28.78■■■□□ 2.2
LST1-219ENST00000464044 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
LST1-219ENST00000464044 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
LST1-219ENST00000464044 NACADO15069 1562 aa27.69■■■□□ 2.02
LST1-219ENST00000464044 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
LST1-219ENST00000464044 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
LST1-219ENST00000464044 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
LST1-219ENST00000464044 PABPN1Q86U42 306 aaKnown RBP eCLIP26.95■■□□□ 1.9
LST1-219ENST00000464044 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
LST1-219ENST00000464044 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
LST1-219ENST00000464044 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
LST1-219ENST00000464044 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
LST1-219ENST00000464044 DNAJC5BQ9UF47 199 aa26.38■■□□□ 1.81
LST1-219ENST00000464044 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
LST1-219ENST00000464044 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
LST1-219ENST00000464044 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
LST1-219ENST00000464044 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.69
LST1-219ENST00000464044 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
LST1-219ENST00000464044 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
LST1-219ENST00000464044 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
LST1-219ENST00000464044 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.67
LST1-219ENST00000464044 MROH2BQ7Z745 1585 aa25.38■■□□□ 1.65
LST1-219ENST00000464044 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
LST1-219ENST00000464044 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
LST1-219ENST00000464044 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
LST1-219ENST00000464044 RSF1Q96T23 1441 aaPredicted RBP25.14■■□□□ 1.62
LST1-219ENST00000464044 WIZO95785 1651 aa25.08■■□□□ 1.61
LST1-219ENST00000464044 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
LST1-219ENST00000464044 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
LST1-219ENST00000464044 LAMC3Q9Y6N6 1575 aa24.85■■□□□ 1.57
LST1-219ENST00000464044 CADPSQ9ULU8 1353 aa24.83■■□□□ 1.57
LST1-219ENST00000464044 NESP48681 1621 aa24.82■■□□□ 1.56
LST1-219ENST00000464044 PDS5BQ9NTI5 1447 aa24.81■■□□□ 1.56
LST1-219ENST00000464044 SUPT5HO00267 1087 aaKnown RBP24.64■■□□□ 1.54
LST1-219ENST00000464044 CUX2O14529 1486 aa24.64■■□□□ 1.53
LST1-219ENST00000464044 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
LST1-219ENST00000464044 CFTRP13569 1480 aa24.62■■□□□ 1.53
LST1-219ENST00000464044 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
LST1-219ENST00000464044 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
LST1-219ENST00000464044 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
LST1-219ENST00000464044 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
LST1-219ENST00000464044 THOC2Q8NI27 1593 aaKnown RBP24.41■■□□□ 1.5
LST1-219ENST00000464044 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
LST1-219ENST00000464044 WDR62O43379 1518 aa24.3■■□□□ 1.48
LST1-219ENST00000464044 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
LST1-219ENST00000464044 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
LST1-219ENST00000464044 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
LST1-219ENST00000464044 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
LST1-219ENST00000464044 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
LST1-219ENST00000464044 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
LST1-219ENST00000464044 SOGA1O94964 1423 aa23.86■■□□□ 1.41
LST1-219ENST00000464044 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
LST1-219ENST00000464044 CUX1P39880 1505 aa23.82■■□□□ 1.4
LST1-219ENST00000464044 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
LST1-219ENST00000464044 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
LST1-219ENST00000464044 ZNF608Q9ULD9 1512 aaPredicted RBP23.77■■□□□ 1.4
LST1-219ENST00000464044 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
LST1-219ENST00000464044 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
LST1-219ENST00000464044 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
LST1-219ENST00000464044 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.38
LST1-219ENST00000464044 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
LST1-219ENST00000464044 WDR97A6NE52 1622 aa23.68■■□□□ 1.38
LST1-219ENST00000464044 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
LST1-219ENST00000464044 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
LST1-219ENST00000464044 FBLN2P98095 1184 aa23.61■■□□□ 1.37
LST1-219ENST00000464044 BIVM-ERCC5R4GMW8 1640 aa23.6■■□□□ 1.37
LST1-219ENST00000464044 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
LST1-219ENST00000464044 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
LST1-219ENST00000464044 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
LST1-219ENST00000464044 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
LST1-219ENST00000464044 CHMP7Q8WUX9 453 aaPredicted RBP23.55■■□□□ 1.36
LST1-219ENST00000464044 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
LST1-219ENST00000464044 SNAPC4Q5SXM2 1469 aa23.47■■□□□ 1.35
LST1-219ENST00000464044 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
LST1-219ENST00000464044 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
LST1-219ENST00000464044 PBRM1Q86U86 1689 aa23.37■■□□□ 1.33
LST1-219ENST00000464044 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
LST1-219ENST00000464044 CHD1O14646 1710 aa23.35■■□□□ 1.33
LST1-219ENST00000464044 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
LST1-219ENST00000464044 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
LST1-219ENST00000464044 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
LST1-219ENST00000464044 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
LST1-219ENST00000464044 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
LST1-219ENST00000464044 IGF1RP08069 1367 aa23.19■■□□□ 1.3
LST1-219ENST00000464044 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
LST1-219ENST00000464044 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
LST1-219ENST00000464044 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
LST1-219ENST00000464044 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
LST1-219ENST00000464044 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
LST1-219ENST00000464044 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
LST1-219ENST00000464044 CUL7Q14999 1698 aa23.09■■□□□ 1.29
LST1-219ENST00000464044 NUP160Q12769 1436 aa23.09■■□□□ 1.29
LST1-219ENST00000464044 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
LST1-219ENST00000464044 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
LST1-219ENST00000464044 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
LST1-219ENST00000464044 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
LST1-219ENST00000464044 KIAA0586Q9BVV6 1533 aa22.93■■□□□ 1.26
LST1-219ENST00000464044 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms