RNA–Protein interactions for RNA: ENST00000463959.1

MTR-203, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 5

Gene MTR, Length 1,972 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-203ENST00000463959 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
MTR-203ENST00000463959 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
MTR-203ENST00000463959 ABCC9O60706 1549 aa17.68■□□□□ 0.42
MTR-203ENST00000463959 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
MTR-203ENST00000463959 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
MTR-203ENST00000463959 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
MTR-203ENST00000463959 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
MTR-203ENST00000463959 NACADO15069 1562 aa17.05■□□□□ 0.32
MTR-203ENST00000463959 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
MTR-203ENST00000463959 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
MTR-203ENST00000463959 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
MTR-203ENST00000463959 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
MTR-203ENST00000463959 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
MTR-203ENST00000463959 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
MTR-203ENST00000463959 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
MTR-203ENST00000463959 SHROOM4Q9ULL8 1493 aa16.39■□□□□ 0.21
MTR-203ENST00000463959 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
MTR-203ENST00000463959 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
MTR-203ENST00000463959 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
MTR-203ENST00000463959 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
MTR-203ENST00000463959 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
MTR-203ENST00000463959 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
MTR-203ENST00000463959 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
MTR-203ENST00000463959 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
MTR-203ENST00000463959 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
MTR-203ENST00000463959 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
MTR-203ENST00000463959 NCAPD3P42695 1498 aa15.76■□□□□ 0.11
MTR-203ENST00000463959 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
MTR-203ENST00000463959 WIZO95785 1651 aa15.75■□□□□ 0.11
MTR-203ENST00000463959 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
MTR-203ENST00000463959 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
MTR-203ENST00000463959 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
MTR-203ENST00000463959 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
MTR-203ENST00000463959 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
MTR-203ENST00000463959 NESP48681 1621 aa15.38■□□□□ 0.05
MTR-203ENST00000463959 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
MTR-203ENST00000463959 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
MTR-203ENST00000463959 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
MTR-203ENST00000463959 CFTRP13569 1480 aa15.26■□□□□ 0.03
MTR-203ENST00000463959 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
MTR-203ENST00000463959 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
MTR-203ENST00000463959 PDS5BQ9NTI5 1447 aa15.16■□□□□ 0.02
MTR-203ENST00000463959 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
MTR-203ENST00000463959 FANCD2Q9BXW9 1451 aa15.13■□□□□ 0.01
MTR-203ENST00000463959 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
MTR-203ENST00000463959 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
MTR-203ENST00000463959 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
MTR-203ENST00000463959 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
MTR-203ENST00000463959 WDR62O43379 1518 aa14.99□□□□□ -0.01
MTR-203ENST00000463959 CUX2O14529 1486 aa14.94□□□□□ -0.02
MTR-203ENST00000463959 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
MTR-203ENST00000463959 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
MTR-203ENST00000463959 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
MTR-203ENST00000463959 CUX1P39880 1505 aa14.9□□□□□ -0.02
MTR-203ENST00000463959 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
MTR-203ENST00000463959 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
MTR-203ENST00000463959 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
MTR-203ENST00000463959 BIVM-ERCC5R4GMW8 1640 aa14.8□□□□□ -0.04
MTR-203ENST00000463959 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
MTR-203ENST00000463959 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
MTR-203ENST00000463959 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
MTR-203ENST00000463959 RAD54L2Q9Y4B4 1467 aa14.77□□□□□ -0.05
MTR-203ENST00000463959 IFT140Q96RY7 1462 aa14.74□□□□□ -0.05
MTR-203ENST00000463959 ZNF608Q9ULD9 1512 aaPredicted RBP14.73□□□□□ -0.05
MTR-203ENST00000463959 SOGA1O94964 1423 aa14.73□□□□□ -0.05
MTR-203ENST00000463959 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
MTR-203ENST00000463959 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.061e-6■■□□□ 12.8
MTR-203ENST00000463959 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
MTR-203ENST00000463959 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
MTR-203ENST00000463959 ABCA10Q8WWZ4 1543 aa14.65□□□□□ -0.06
MTR-203ENST00000463959 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
MTR-203ENST00000463959 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
MTR-203ENST00000463959 GAPVD1Q14C86 1478 aa14.56□□□□□ -0.08
MTR-203ENST00000463959 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
MTR-203ENST00000463959 GRIN2BQ13224 1484 aa14.53□□□□□ -0.08
MTR-203ENST00000463959 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
MTR-203ENST00000463959 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
MTR-203ENST00000463959 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
MTR-203ENST00000463959 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
MTR-203ENST00000463959 ERICH3Q5RHP9 1530 aa14.47□□□□□ -0.09
MTR-203ENST00000463959 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
MTR-203ENST00000463959 CHD1O14646 1710 aa14.46□□□□□ -0.09
MTR-203ENST00000463959 IGF1RP08069 1367 aa14.44□□□□□ -0.1
MTR-203ENST00000463959 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
MTR-203ENST00000463959 SYNJ2O15056 1496 aa14.41□□□□□ -0.1
MTR-203ENST00000463959 FBLN2P98095 1184 aa14.4□□□□□ -0.1
MTR-203ENST00000463959 FHAD1B1AJZ9 1412 aa14.39□□□□□ -0.11
MTR-203ENST00000463959 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
MTR-203ENST00000463959 CUL7Q14999 1698 aa14.36□□□□□ -0.11
MTR-203ENST00000463959 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
MTR-203ENST00000463959 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
MTR-203ENST00000463959 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
MTR-203ENST00000463959 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
MTR-203ENST00000463959 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
MTR-203ENST00000463959 DNAJC5Q9H3Z4 198 aa14.31□□□□□ -0.12
MTR-203ENST00000463959 EEA1Q15075 1411 aa14.3□□□□□ -0.12
MTR-203ENST00000463959 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
MTR-203ENST00000463959 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
MTR-203ENST00000463959 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
MTR-203ENST00000463959 NUP160Q12769 1436 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms