RNA–Protein interactions for RNA: ENST00000463784.5

IRF1-207, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-207ENST00000463784 NISCHQ9Y2I1 1504 aa49.23■■■■■ 5.47
IRF1-207ENST00000463784 CCDC180Q9P1Z9 1646 aa43.7■■■■■ 4.59
IRF1-207ENST00000463784 ABCC9O60706 1549 aa42.81■■■■■ 4.44
IRF1-207ENST00000463784 DCAF8L2P0C7V8 631 aa41.29■■■■■ 4.2
IRF1-207ENST00000463784 RB1CC1Q8TDY2 1594 aa41.2■■■■■ 4.19
IRF1-207ENST00000463784 NACADO15069 1562 aa41.16■■■■■ 4.18
IRF1-207ENST00000463784 ZCCHC6Q5VYS8 1495 aaKnown RBP40.98■■■■■ 4.15
IRF1-207ENST00000463784 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
IRF1-207ENST00000463784 DCAF1Q9Y4B6 1507 aa40.74■■■■■ 4.11
IRF1-207ENST00000463784 UNC13AQ9UPW8 1703 aa40.06■■■■■ 4
IRF1-207ENST00000463784 PABPN1Q86U42 306 aaKnown RBP eCLIP40.06■■■■■ 4
IRF1-207ENST00000463784 SCRIBQ14160 1630 aa39.87■■■■□ 3.97
IRF1-207ENST00000463784 BICRAQ9NZM4 1560 aa39.84■■■■□ 3.97
IRF1-207ENST00000463784 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
IRF1-207ENST00000463784 DNAJC5BQ9UF47 199 aa39.27■■■■□ 3.88
IRF1-207ENST00000463784 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
IRF1-207ENST00000463784 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
IRF1-207ENST00000463784 CECR2Q9BXF3 1484 aa38.49■■■■□ 3.75
IRF1-207ENST00000463784 BAZ1AQ9NRL2 1556 aaPredicted RBP38.18■■■■□ 3.7
IRF1-207ENST00000463784 SMARCA4P51532 1647 aa38.15■■■■□ 3.7
IRF1-207ENST00000463784 NCAPD3P42695 1498 aa38■■■■□ 3.67
IRF1-207ENST00000463784 ATAD2BQ9ULI0 1458 aa37.99■■■■□ 3.67
IRF1-207ENST00000463784 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
IRF1-207ENST00000463784 MROH2BQ7Z745 1585 aa37.91■■■■□ 3.66
IRF1-207ENST00000463784 PEG3Q9GZU2 1588 aa37.79■■■■□ 3.64
IRF1-207ENST00000463784 HMGXB3Q12766 1538 aa37.76■■■■□ 3.63
IRF1-207ENST00000463784 BAZ1BQ9UIG0 1483 aaKnown RBP37.71■■■■□ 3.63
IRF1-207ENST00000463784 RSF1Q96T23 1441 aaPredicted RBP37.53■■■■□ 3.6
IRF1-207ENST00000463784 WIZO95785 1651 aa37.46■■■■□ 3.59
IRF1-207ENST00000463784 TOP2AP11388 1531 aaKnown RBP37.12■■■■□ 3.53
IRF1-207ENST00000463784 NESP48681 1621 aa37■■■■□ 3.51
IRF1-207ENST00000463784 LAMC3Q9Y6N6 1575 aa36.96■■■■□ 3.51
IRF1-207ENST00000463784 ERCC6Q03468 1493 aa36.96■■■■□ 3.51
IRF1-207ENST00000463784 CADPSQ9ULU8 1353 aa36.92■■■■□ 3.5
IRF1-207ENST00000463784 PDS5BQ9NTI5 1447 aa36.8■■■■□ 3.48
IRF1-207ENST00000463784 CCDC88BA6NC98 1476 aa36.71■■■■□ 3.47
IRF1-207ENST00000463784 SUPT5HO00267 1087 aaKnown RBP36.7■■■■□ 3.47
IRF1-207ENST00000463784 CFTRP13569 1480 aa36.67■■■■□ 3.46
IRF1-207ENST00000463784 CUX2O14529 1486 aa36.54■■■■□ 3.44
IRF1-207ENST00000463784 KIF21AQ7Z4S6 1674 aa36.49■■■■□ 3.43
IRF1-207ENST00000463784 FANCD2Q9BXW9 1451 aa36.46■■■■□ 3.43
IRF1-207ENST00000463784 CEP164Q9UPV0 1460 aa36.43■■■■□ 3.42
IRF1-207ENST00000463784 THOC2Q8NI27 1593 aaKnown RBP36.39■■■■□ 3.42
IRF1-207ENST00000463784 MRC2Q9UBG0 1479 aa36.36■■■■□ 3.41
IRF1-207ENST00000463784 PRDM2Q13029 1718 aa36.23■■■■□ 3.39
IRF1-207ENST00000463784 WDR62O43379 1518 aa36.18■■■■□ 3.38
IRF1-207ENST00000463784 URB2Q14146 1524 aaKnown RBP36.04■■■■□ 3.36
IRF1-207ENST00000463784 ABCC8Q09428 1581 aa35.95■■■■□ 3.35
IRF1-207ENST00000463784 TOPBP1Q92547 1522 aa35.85■■■■□ 3.33
IRF1-207ENST00000463784 DNMBPQ6XZF7 1577 aa35.81■■■■□ 3.32
IRF1-207ENST00000463784 IFT140Q96RY7 1462 aa35.68■■■■□ 3.3
IRF1-207ENST00000463784 CUX1P39880 1505 aa35.56■■■■□ 3.28
IRF1-207ENST00000463784 POLA1P09884 1462 aaPredicted RBP35.54■■■■□ 3.28
IRF1-207ENST00000463784 SOGA1O94964 1423 aa35.49■■■■□ 3.27
IRF1-207ENST00000463784 FGD5Q6ZNL6 1462 aa35.48■■■■□ 3.27
IRF1-207ENST00000463784 DNAJC5Q9H3Z4 198 aa35.45■■■■□ 3.27
IRF1-207ENST00000463784 ZNF608Q9ULD9 1512 aaPredicted RBP35.44■■■■□ 3.26
IRF1-207ENST00000463784 WRNQ14191 1432 aaPredicted RBP eCLIP35.42■■■■□ 3.26
IRF1-207ENST00000463784 TARBP1Q13395 1621 aaKnown RBP35.4■■■■□ 3.26
IRF1-207ENST00000463784 RAD54L2Q9Y4B4 1467 aa35.4■■■■□ 3.26
IRF1-207ENST00000463784 AQRO60306 1485 aaKnown RBP eCLIP35.29■■■■□ 3.248e-7■■■□□ 16.1
IRF1-207ENST00000463784 TOP2BQ02880 1626 aa35.27■■■■□ 3.24
IRF1-207ENST00000463784 TDRD9Q8NDG6 1382 aaKnown RBP35.26■■■■□ 3.24
IRF1-207ENST00000463784 EIF4G3O43432 1585 aaKnown RBP35.26■■■■□ 3.24
IRF1-207ENST00000463784 BIVM-ERCC5R4GMW8 1640 aa35.23■■■■□ 3.23
IRF1-207ENST00000463784 SYNJ1O43426 1573 aa35.21■■■■□ 3.23
IRF1-207ENST00000463784 WDR97A6NE52 1622 aa35.19■■■■□ 3.22
IRF1-207ENST00000463784 OSCARQ8IYS5 282 aa35.14■■■■□ 3.22
IRF1-207ENST00000463784 ABCA10Q8WWZ4 1543 aa35.14■■■■□ 3.22
IRF1-207ENST00000463784 GRIN2BQ13224 1484 aa35.04■■■■□ 3.2
IRF1-207ENST00000463784 GAPVD1Q14C86 1478 aa35.04■■■■□ 3.2
IRF1-207ENST00000463784 FBLN2P98095 1184 aa34.98■■■■□ 3.19
IRF1-207ENST00000463784 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
IRF1-207ENST00000463784 MAGI1Q96QZ7 1491 aaPredicted RBP34.94■■■■□ 3.18
IRF1-207ENST00000463784 ABCA5Q8WWZ7 1642 aa34.92■■■■□ 3.18
IRF1-207ENST00000463784 CHMP7Q8WUX9 453 aaPredicted RBP34.89■■■■□ 3.18
IRF1-207ENST00000463784 PBRM1Q86U86 1689 aa34.83■■■■□ 3.17
IRF1-207ENST00000463784 SYNJ2O15056 1496 aa34.8■■■■□ 3.16
IRF1-207ENST00000463784 CHD1O14646 1710 aa34.77■■■■□ 3.16
IRF1-207ENST00000463784 KIF27Q86VH2 1401 aa34.72■■■■□ 3.15
IRF1-207ENST00000463784 ERICH3Q5RHP9 1530 aa34.72■■■■□ 3.15
IRF1-207ENST00000463784 TRIM41Q8WV44 630 aa34.7■■■■□ 3.15
IRF1-207ENST00000463784 FHAD1B1AJZ9 1412 aa34.66■■■■□ 3.14
IRF1-207ENST00000463784 ADAMTS12P58397 1594 aa34.6■■■■□ 3.13
IRF1-207ENST00000463784 GRIN2AQ12879 1464 aa34.56■■■■□ 3.12
IRF1-207ENST00000463784 IGF1RP08069 1367 aa34.55■■■■□ 3.12
IRF1-207ENST00000463784 CLASP1Q7Z460 1538 aa34.45■■■■□ 3.11
IRF1-207ENST00000463784 ARHGEF11O15085 1522 aa34.41■■■■□ 3.1
IRF1-207ENST00000463784 NUP160Q12769 1436 aa34.4■■■■□ 3.1
IRF1-207ENST00000463784 CUL7Q14999 1698 aa34.38■■■■□ 3.09
IRF1-207ENST00000463784 RIMBP3CA6NJZ7 1639 aa34.37■■■■□ 3.09
IRF1-207ENST00000463784 RIMBP3BA6NNM3 1639 aa34.37■■■■□ 3.09
IRF1-207ENST00000463784 RIMBP3Q9UFD9 1639 aa34.37■■■■□ 3.09
IRF1-207ENST00000463784 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
IRF1-207ENST00000463784 CEP170Q5SW79 1584 aa34.32■■■■□ 3.09
IRF1-207ENST00000463784 RUSC2Q8N2Y8 1516 aa34.3■■■■□ 3.08
IRF1-207ENST00000463784 CHIC1Q5VXU3 224 aa34.22■■■■□ 3.07
IRF1-207ENST00000463784 CYB5RLQ6IPT4 315 aa34.22■■■■□ 3.07
IRF1-207ENST00000463784 JPH4Q96JJ6 628 aa34.15■■■■□ 3.06
IRF1-207ENST00000463784 RAPGEF2Q9Y4G8 1499 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms