RNA–Protein interactions for RNA: ENST00000463744.1

PCGF1-202, Transcript of polycomb group ring finger 1, humanhuman

TSL 1 (best)

Gene PCGF1, Length 227 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-202ENST00000463744 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
PCGF1-202ENST00000463744 CCDC180Q9P1Z9 1646 aa12.05□□□□□ -0.48
PCGF1-202ENST00000463744 ZCCHC6Q5VYS8 1495 aaKnown RBP11.56□□□□□ -0.56
PCGF1-202ENST00000463744 ABCC9O60706 1549 aa11.46□□□□□ -0.57
PCGF1-202ENST00000463744 DCAF1Q9Y4B6 1507 aa11.44□□□□□ -0.58
PCGF1-202ENST00000463744 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
PCGF1-202ENST00000463744 MYO15BQ96JP2 1530 aa11.36□□□□□ -0.59
PCGF1-202ENST00000463744 NACADO15069 1562 aa11.28□□□□□ -0.6
PCGF1-202ENST00000463744 RB1CC1Q8TDY2 1594 aa11.19□□□□□ -0.62
PCGF1-202ENST00000463744 SHROOM4Q9ULL8 1493 aa11.12□□□□□ -0.63
PCGF1-202ENST00000463744 SCRIBQ14160 1630 aa11.03□□□□□ -0.64
PCGF1-202ENST00000463744 UNC13AQ9UPW8 1703 aa10.86□□□□□ -0.67
PCGF1-202ENST00000463744 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
PCGF1-202ENST00000463744 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
PCGF1-202ENST00000463744 CECR2Q9BXF3 1484 aa10.69□□□□□ -0.7
PCGF1-202ENST00000463744 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
PCGF1-202ENST00000463744 RSF1Q96T23 1441 aaPredicted RBP10.66□□□□□ -0.7
PCGF1-202ENST00000463744 BAZ1AQ9NRL2 1556 aaPredicted RBP10.65□□□□□ -0.7
PCGF1-202ENST00000463744 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
PCGF1-202ENST00000463744 SMARCA4P51532 1647 aa10.59□□□□□ -0.71
PCGF1-202ENST00000463744 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
PCGF1-202ENST00000463744 PEG3Q9GZU2 1588 aa10.5□□□□□ -0.73
PCGF1-202ENST00000463744 WIZO95785 1651 aa10.5□□□□□ -0.73
PCGF1-202ENST00000463744 ATAD2BQ9ULI0 1458 aa10.48□□□□□ -0.73
PCGF1-202ENST00000463744 SMARCA2P51531 1590 aa10.47□□□□□ -0.73
PCGF1-202ENST00000463744 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
PCGF1-202ENST00000463744 NCAPD3P42695 1498 aa10.42□□□□□ -0.74
PCGF1-202ENST00000463744 BAZ1BQ9UIG0 1483 aaKnown RBP10.4□□□□□ -0.74
PCGF1-202ENST00000463744 HMGXB3Q12766 1538 aa10.38□□□□□ -0.75
PCGF1-202ENST00000463744 CC2D2AQ9P2K1 1620 aa10.37□□□□□ -0.75
PCGF1-202ENST00000463744 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
PCGF1-202ENST00000463744 DNAJC5BQ9UF47 199 aa10.21□□□□□ -0.77
PCGF1-202ENST00000463744 CHIC1Q5VXU3 224 aa10.19□□□□□ -0.78
PCGF1-202ENST00000463744 CFTRP13569 1480 aa10.16□□□□□ -0.78
PCGF1-202ENST00000463744 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
PCGF1-202ENST00000463744 TRIM41Q8WV44 630 aa10.07□□□□□ -0.8
PCGF1-202ENST00000463744 LAMC3Q9Y6N6 1575 aa10.06□□□□□ -0.8
PCGF1-202ENST00000463744 WRNQ14191 1432 aaPredicted RBP eCLIP10.04□□□□□ -0.8
PCGF1-202ENST00000463744 NESP48681 1621 aa10.03□□□□□ -0.8
PCGF1-202ENST00000463744 ABCC8Q09428 1581 aa10.02□□□□□ -0.81
PCGF1-202ENST00000463744 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
PCGF1-202ENST00000463744 FANCD2Q9BXW9 1451 aa10.01□□□□□ -0.81
PCGF1-202ENST00000463744 PRDM2Q13029 1718 aa10.01□□□□□ -0.81
PCGF1-202ENST00000463744 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.82
PCGF1-202ENST00000463744 SYNJ1O43426 1573 aa9.95□□□□□ -0.82
PCGF1-202ENST00000463744 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
PCGF1-202ENST00000463744 CUX1P39880 1505 aa9.94□□□□□ -0.82
PCGF1-202ENST00000463744 BIVM-ERCC5R4GMW8 1640 aa9.93□□□□□ -0.82
PCGF1-202ENST00000463744 DNMBPQ6XZF7 1577 aa9.89□□□□□ -0.83
PCGF1-202ENST00000463744 TOPBP1Q92547 1522 aa9.88□□□□□ -0.83
PCGF1-202ENST00000463744 EEA1Q15075 1411 aa9.88□□□□□ -0.83
PCGF1-202ENST00000463744 URB2Q14146 1524 aaKnown RBP9.87□□□□□ -0.83
PCGF1-202ENST00000463744 MRC2Q9UBG0 1479 aa9.87□□□□□ -0.83
PCGF1-202ENST00000463744 KIF21AQ7Z4S6 1674 aa9.87□□□□□ -0.83
PCGF1-202ENST00000463744 ERCC6Q03468 1493 aa9.86□□□□□ -0.83
PCGF1-202ENST00000463744 FGD5Q6ZNL6 1462 aa9.85□□□□□ -0.83
PCGF1-202ENST00000463744 SOGA1O94964 1423 aa9.85□□□□□ -0.83
PCGF1-202ENST00000463744 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
PCGF1-202ENST00000463744 AEBP2Q6ZN18 517 aaPredicted RBP9.82□□□□□ -0.84
PCGF1-202ENST00000463744 POLA1P09884 1462 aaPredicted RBP9.82□□□□□ -0.84
PCGF1-202ENST00000463744 WDR62O43379 1518 aa9.82□□□□□ -0.84
PCGF1-202ENST00000463744 CSRNP3Q8WYN3 585 aa9.81□□□□□ -0.84
PCGF1-202ENST00000463744 KIF27Q86VH2 1401 aa9.81□□□□□ -0.84
PCGF1-202ENST00000463744 RUSC2Q8N2Y8 1516 aa9.8□□□□□ -0.84
PCGF1-202ENST00000463744 ABCA10Q8WWZ4 1543 aa9.79□□□□□ -0.84
PCGF1-202ENST00000463744 THOC2Q8NI27 1593 aaKnown RBP9.78□□□□□ -0.84
PCGF1-202ENST00000463744 CUX2O14529 1486 aa9.78□□□□□ -0.84
PCGF1-202ENST00000463744 RAD54L2Q9Y4B4 1467 aa9.78□□□□□ -0.84
PCGF1-202ENST00000463744 LOC105371045A0A1W2PR82 267 aa9.76□□□□□ -0.85
PCGF1-202ENST00000463744 IFT140Q96RY7 1462 aa9.74□□□□□ -0.85
PCGF1-202ENST00000463744 IGF1RP08069 1367 aa9.73□□□□□ -0.85
PCGF1-202ENST00000463744 TARBP1Q13395 1621 aaKnown RBP9.72□□□□□ -0.85
PCGF1-202ENST00000463744 PRXQ9BXM0 1461 aa9.71□□□□□ -0.86
PCGF1-202ENST00000463744 WDR97A6NE52 1622 aa9.71□□□□□ -0.86
PCGF1-202ENST00000463744 TDRD9Q8NDG6 1382 aaKnown RBP9.7□□□□□ -0.86
PCGF1-202ENST00000463744 GOLGA3Q08378 1498 aa9.7□□□□□ -0.86
PCGF1-202ENST00000463744 GAPVD1Q14C86 1478 aa9.7□□□□□ -0.86
PCGF1-202ENST00000463744 KIF21BO75037 1637 aa9.7□□□□□ -0.86
PCGF1-202ENST00000463744 ABCA5Q8WWZ7 1642 aa9.68□□□□□ -0.86
PCGF1-202ENST00000463744 CARMIL1Q5VZK9 1371 aa9.68□□□□□ -0.86
PCGF1-202ENST00000463744 ERICH3Q5RHP9 1530 aa9.67□□□□□ -0.86
PCGF1-202ENST00000463744 TNIKQ9UKE5 1360 aa9.67□□□□□ -0.86
PCGF1-202ENST00000463744 UBTFP17480 764 aaKnown RBP9.66□□□□□ -0.86
PCGF1-202ENST00000463744 EHMT2Q96KQ7 1210 aa9.66□□□□□ -0.86
PCGF1-202ENST00000463744 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.86
PCGF1-202ENST00000463744 RAPGEF2Q9Y4G8 1499 aa9.66□□□□□ -0.86
PCGF1-202ENST00000463744 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
PCGF1-202ENST00000463744 GRIN2BQ13224 1484 aa9.65□□□□□ -0.87
PCGF1-202ENST00000463744 CUL7Q14999 1698 aa9.64□□□□□ -0.87
PCGF1-202ENST00000463744 FHAD1B1AJZ9 1412 aa9.61□□□□□ -0.87
PCGF1-202ENST00000463744 EIF4G3O43432 1585 aaKnown RBP9.6□□□□□ -0.87
PCGF1-202ENST00000463744 PBRM1Q86U86 1689 aa9.58□□□□□ -0.88
PCGF1-202ENST00000463744 MAGI1Q96QZ7 1491 aaPredicted RBP9.58□□□□□ -0.88
PCGF1-202ENST00000463744 CEP162Q5TB80 1403 aa9.57□□□□□ -0.88
PCGF1-202ENST00000463744 SNAPC4Q5SXM2 1469 aa9.57□□□□□ -0.88
PCGF1-202ENST00000463744 ADAMTS12P58397 1594 aa9.57□□□□□ -0.88
PCGF1-202ENST00000463744 SYNJ2O15056 1496 aa9.54□□□□□ -0.88
PCGF1-202ENST00000463744 CLIP1P30622 1438 aa9.53□□□□□ -0.88
PCGF1-202ENST00000463744 CHMP7Q8WUX9 453 aaPredicted RBP9.52□□□□□ -0.89
PCGF1-202ENST00000463744 GRIN2AQ12879 1464 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms