RNA–Protein interactions for RNA: ENST00000463652.5

CDK11A-210, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 1,028 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-210ENST00000463652 NISCHQ9Y2I1 1504 aa38.25■■■■□ 3.71
CDK11A-210ENST00000463652 CCDC180Q9P1Z9 1646 aa33.85■■■■□ 3.01
CDK11A-210ENST00000463652 ABCC9O60706 1549 aa32.55■■■□□ 2.8
CDK11A-210ENST00000463652 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
CDK11A-210ENST00000463652 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
CDK11A-210ENST00000463652 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.67
CDK11A-210ENST00000463652 NACADO15069 1562 aa31.69■■■□□ 2.66
CDK11A-210ENST00000463652 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
CDK11A-210ENST00000463652 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
CDK11A-210ENST00000463652 SCRIBQ14160 1630 aa30.84■■■□□ 2.53
CDK11A-210ENST00000463652 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
CDK11A-210ENST00000463652 BICRAQ9NZM4 1560 aa30.57■■■□□ 2.48
CDK11A-210ENST00000463652 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
CDK11A-210ENST00000463652 PABPN1Q86U42 306 aaKnown RBP eCLIP30.43■■■□□ 2.46
CDK11A-210ENST00000463652 EIF4G1Q04637 1599 aaKnown RBP29.75■■■□□ 2.35
CDK11A-210ENST00000463652 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
CDK11A-210ENST00000463652 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
CDK11A-210ENST00000463652 SMARCA4P51532 1647 aa29.58■■■□□ 2.33
CDK11A-210ENST00000463652 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
CDK11A-210ENST00000463652 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
CDK11A-210ENST00000463652 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
CDK11A-210ENST00000463652 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
CDK11A-210ENST00000463652 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
CDK11A-210ENST00000463652 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
CDK11A-210ENST00000463652 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
CDK11A-210ENST00000463652 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
CDK11A-210ENST00000463652 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
CDK11A-210ENST00000463652 WIZO95785 1651 aa29.14■■■□□ 2.26
CDK11A-210ENST00000463652 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
CDK11A-210ENST00000463652 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
CDK11A-210ENST00000463652 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
CDK11A-210ENST00000463652 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
CDK11A-210ENST00000463652 LAMC3Q9Y6N6 1575 aa28.39■■■□□ 2.14
CDK11A-210ENST00000463652 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
CDK11A-210ENST00000463652 CFTRP13569 1480 aa28.33■■■□□ 2.13
CDK11A-210ENST00000463652 NESP48681 1621 aa28.29■■■□□ 2.12
CDK11A-210ENST00000463652 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
CDK11A-210ENST00000463652 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
CDK11A-210ENST00000463652 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
CDK11A-210ENST00000463652 FANCD2Q9BXW9 1451 aa28.05■■■□□ 2.08
CDK11A-210ENST00000463652 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
CDK11A-210ENST00000463652 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
CDK11A-210ENST00000463652 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
CDK11A-210ENST00000463652 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
CDK11A-210ENST00000463652 WDR62O43379 1518 aa27.75■■■□□ 2.03
CDK11A-210ENST00000463652 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
CDK11A-210ENST00000463652 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
CDK11A-210ENST00000463652 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
CDK11A-210ENST00000463652 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
CDK11A-210ENST00000463652 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
CDK11A-210ENST00000463652 CUX2O14529 1486 aa27.63■■■□□ 2.01
CDK11A-210ENST00000463652 CUX1P39880 1505 aa27.61■■■□□ 2.01
CDK11A-210ENST00000463652 TOP2BQ02880 1626 aa27.53■■■□□ 2
CDK11A-210ENST00000463652 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
CDK11A-210ENST00000463652 SYNJ1O43426 1573 aa27.52■■■□□ 2
CDK11A-210ENST00000463652 POLA1P09884 1462 aaPredicted RBP27.45■■□□□ 1.99
CDK11A-210ENST00000463652 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
CDK11A-210ENST00000463652 IFT140Q96RY7 1462 aa27.39■■□□□ 1.98
CDK11A-210ENST00000463652 SOGA1O94964 1423 aa27.33■■□□□ 1.97
CDK11A-210ENST00000463652 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
CDK11A-210ENST00000463652 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
CDK11A-210ENST00000463652 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
CDK11A-210ENST00000463652 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
CDK11A-210ENST00000463652 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
CDK11A-210ENST00000463652 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
CDK11A-210ENST00000463652 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
CDK11A-210ENST00000463652 EIF4G3O43432 1585 aaKnown RBP27.12■■□□□ 1.93
CDK11A-210ENST00000463652 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
CDK11A-210ENST00000463652 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
CDK11A-210ENST00000463652 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.921e-6■■□□□ 14
CDK11A-210ENST00000463652 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
CDK11A-210ENST00000463652 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
CDK11A-210ENST00000463652 GRIN2BQ13224 1484 aa27■■□□□ 1.91
CDK11A-210ENST00000463652 PBRM1Q86U86 1689 aa26.95■■□□□ 1.91
CDK11A-210ENST00000463652 ERICH3Q5RHP9 1530 aa26.94■■□□□ 1.9
CDK11A-210ENST00000463652 EEA1Q15075 1411 aa26.9■■□□□ 1.9
CDK11A-210ENST00000463652 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
CDK11A-210ENST00000463652 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
CDK11A-210ENST00000463652 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
CDK11A-210ENST00000463652 IGF1RP08069 1367 aa26.82■■□□□ 1.88
CDK11A-210ENST00000463652 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
CDK11A-210ENST00000463652 CUL7Q14999 1698 aa26.79■■□□□ 1.88
CDK11A-210ENST00000463652 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
CDK11A-210ENST00000463652 SYNJ2O15056 1496 aa26.76■■□□□ 1.87
CDK11A-210ENST00000463652 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
CDK11A-210ENST00000463652 CARMIL1Q5VZK9 1371 aa26.69■■□□□ 1.86
CDK11A-210ENST00000463652 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
CDK11A-210ENST00000463652 CHD1O14646 1710 aa26.65■■□□□ 1.86
CDK11A-210ENST00000463652 GRIN2AQ12879 1464 aa26.64■■□□□ 1.86
CDK11A-210ENST00000463652 PRXQ9BXM0 1461 aa26.63■■□□□ 1.85
CDK11A-210ENST00000463652 FAM9AQ8IZU1 332 aaPredicted RBP26.63■■□□□ 1.85
CDK11A-210ENST00000463652 FBLN2P98095 1184 aa26.62■■□□□ 1.85
CDK11A-210ENST00000463652 RAPGEF2Q9Y4G8 1499 aa26.61■■□□□ 1.85
CDK11A-210ENST00000463652 KIF21BO75037 1637 aa26.54■■□□□ 1.84
CDK11A-210ENST00000463652 NUP160Q12769 1436 aa26.51■■□□□ 1.83
CDK11A-210ENST00000463652 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
CDK11A-210ENST00000463652 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
CDK11A-210ENST00000463652 GOLGA3Q08378 1498 aa26.42■■□□□ 1.82
CDK11A-210ENST00000463652 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
CDK11A-210ENST00000463652 KIAA0586Q9BVV6 1533 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms