RNA–Protein interactions for RNA: ENST00000463507.1

SCML4-208, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 5

Gene SCML4, Length 1,112 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-208ENST00000463507 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
SCML4-208ENST00000463507 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
SCML4-208ENST00000463507 ABCC9O60706 1549 aa30.64■■■□□ 2.5
SCML4-208ENST00000463507 NACADO15069 1562 aa29.52■■■□□ 2.32
SCML4-208ENST00000463507 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
SCML4-208ENST00000463507 DCAF8L2P0C7V8 631 aa29.51■■■□□ 2.31
SCML4-208ENST00000463507 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
SCML4-208ENST00000463507 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
SCML4-208ENST00000463507 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
SCML4-208ENST00000463507 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
SCML4-208ENST00000463507 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
SCML4-208ENST00000463507 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
SCML4-208ENST00000463507 SCRIBQ14160 1630 aa28.63■■■□□ 2.17
SCML4-208ENST00000463507 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
SCML4-208ENST00000463507 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
SCML4-208ENST00000463507 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
SCML4-208ENST00000463507 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
SCML4-208ENST00000463507 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
SCML4-208ENST00000463507 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
SCML4-208ENST00000463507 BAZ1AQ9NRL2 1556 aaPredicted RBP27.41■■□□□ 1.98
SCML4-208ENST00000463507 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
SCML4-208ENST00000463507 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
SCML4-208ENST00000463507 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
SCML4-208ENST00000463507 SMARCA2P51531 1590 aa27.23■■□□□ 1.95
SCML4-208ENST00000463507 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
SCML4-208ENST00000463507 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
SCML4-208ENST00000463507 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
SCML4-208ENST00000463507 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
SCML4-208ENST00000463507 WIZO95785 1651 aa26.95■■□□□ 1.9
SCML4-208ENST00000463507 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
SCML4-208ENST00000463507 NESP48681 1621 aa26.54■■□□□ 1.84
SCML4-208ENST00000463507 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
SCML4-208ENST00000463507 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
SCML4-208ENST00000463507 CCDC88BA6NC98 1476 aa26.4■■□□□ 1.82
SCML4-208ENST00000463507 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
SCML4-208ENST00000463507 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
SCML4-208ENST00000463507 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
SCML4-208ENST00000463507 CFTRP13569 1480 aa26.34■■□□□ 1.81
SCML4-208ENST00000463507 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
SCML4-208ENST00000463507 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
SCML4-208ENST00000463507 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
SCML4-208ENST00000463507 CUX2O14529 1486 aa26.11■■□□□ 1.77
SCML4-208ENST00000463507 CEP164Q9UPV0 1460 aa26.1■■□□□ 1.77
SCML4-208ENST00000463507 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
SCML4-208ENST00000463507 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
SCML4-208ENST00000463507 WDR62O43379 1518 aa25.96■■□□□ 1.75
SCML4-208ENST00000463507 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
SCML4-208ENST00000463507 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
SCML4-208ENST00000463507 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
SCML4-208ENST00000463507 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
SCML4-208ENST00000463507 CUX1P39880 1505 aa25.58■■□□□ 1.68
SCML4-208ENST00000463507 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
SCML4-208ENST00000463507 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
SCML4-208ENST00000463507 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
SCML4-208ENST00000463507 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
SCML4-208ENST00000463507 SOGA1O94964 1423 aa25.44■■□□□ 1.66
SCML4-208ENST00000463507 TARBP1Q13395 1621 aaKnown RBP25.44■■□□□ 1.66
SCML4-208ENST00000463507 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
SCML4-208ENST00000463507 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
SCML4-208ENST00000463507 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
SCML4-208ENST00000463507 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
SCML4-208ENST00000463507 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
SCML4-208ENST00000463507 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.64
SCML4-208ENST00000463507 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
SCML4-208ENST00000463507 TDRD9Q8NDG6 1382 aaKnown RBP25.28■■□□□ 1.64
SCML4-208ENST00000463507 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
SCML4-208ENST00000463507 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
SCML4-208ENST00000463507 DNAJC5Q9H3Z4 198 aa25.23■■□□□ 1.63
SCML4-208ENST00000463507 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
SCML4-208ENST00000463507 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
SCML4-208ENST00000463507 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
SCML4-208ENST00000463507 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
SCML4-208ENST00000463507 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
SCML4-208ENST00000463507 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
SCML4-208ENST00000463507 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
SCML4-208ENST00000463507 FBLN2P98095 1184 aa24.97■■□□□ 1.59
SCML4-208ENST00000463507 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
SCML4-208ENST00000463507 CHMP7Q8WUX9 453 aaPredicted RBP24.94■■□□□ 1.58
SCML4-208ENST00000463507 ERICH3Q5RHP9 1530 aa24.94■■□□□ 1.58
SCML4-208ENST00000463507 CHD1O14646 1710 aa24.92■■□□□ 1.58
SCML4-208ENST00000463507 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
SCML4-208ENST00000463507 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
SCML4-208ENST00000463507 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
SCML4-208ENST00000463507 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
SCML4-208ENST00000463507 IGF1RP08069 1367 aa24.83■■□□□ 1.57
SCML4-208ENST00000463507 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
SCML4-208ENST00000463507 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
SCML4-208ENST00000463507 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
SCML4-208ENST00000463507 NUP160Q12769 1436 aa24.7■■□□□ 1.55
SCML4-208ENST00000463507 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
SCML4-208ENST00000463507 CUL7Q14999 1698 aa24.69■■□□□ 1.54
SCML4-208ENST00000463507 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
SCML4-208ENST00000463507 CEP170Q5SW79 1584 aa24.65■■□□□ 1.54
SCML4-208ENST00000463507 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
SCML4-208ENST00000463507 RIMBP3CA6NJZ7 1639 aa24.6■■□□□ 1.53
SCML4-208ENST00000463507 RIMBP3BA6NNM3 1639 aa24.6■■□□□ 1.53
SCML4-208ENST00000463507 RIMBP3Q9UFD9 1639 aa24.6■■□□□ 1.53
SCML4-208ENST00000463507 RAPGEF2Q9Y4G8 1499 aa24.52■■□□□ 1.52
SCML4-208ENST00000463507 EEA1Q15075 1411 aa24.51■■□□□ 1.51
SCML4-208ENST00000463507 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms