RNA–Protein interactions for RNA: ENST00000463387.1

VGLL4-216, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 238 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-216ENST00000463387 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
VGLL4-216ENST00000463387 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.13
VGLL4-216ENST00000463387 ABCC9O60706 1549 aa15.63■□□□□ 0.09
VGLL4-216ENST00000463387 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
VGLL4-216ENST00000463387 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
VGLL4-216ENST00000463387 NACADO15069 1562 aa14.97□□□□□ -0.01
VGLL4-216ENST00000463387 ZCCHC6Q5VYS8 1495 aaKnown RBP14.95□□□□□ -0.02
VGLL4-216ENST00000463387 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
VGLL4-216ENST00000463387 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
VGLL4-216ENST00000463387 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
VGLL4-216ENST00000463387 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
VGLL4-216ENST00000463387 UNC13AQ9UPW8 1703 aa14.59□□□□□ -0.07
VGLL4-216ENST00000463387 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
VGLL4-216ENST00000463387 SHROOM4Q9ULL8 1493 aa14.35□□□□□ -0.11
VGLL4-216ENST00000463387 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
VGLL4-216ENST00000463387 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
VGLL4-216ENST00000463387 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
VGLL4-216ENST00000463387 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
VGLL4-216ENST00000463387 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
VGLL4-216ENST00000463387 SMARCA4P51532 1647 aa13.91□□□□□ -0.18
VGLL4-216ENST00000463387 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
VGLL4-216ENST00000463387 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
VGLL4-216ENST00000463387 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
VGLL4-216ENST00000463387 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
VGLL4-216ENST00000463387 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
VGLL4-216ENST00000463387 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
VGLL4-216ENST00000463387 HMGXB3Q12766 1538 aa13.73□□□□□ -0.21
VGLL4-216ENST00000463387 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
VGLL4-216ENST00000463387 WIZO95785 1651 aa13.71□□□□□ -0.21
VGLL4-216ENST00000463387 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
VGLL4-216ENST00000463387 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
VGLL4-216ENST00000463387 NESP48681 1621 aa13.52□□□□□ -0.25
VGLL4-216ENST00000463387 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
VGLL4-216ENST00000463387 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
VGLL4-216ENST00000463387 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
VGLL4-216ENST00000463387 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
VGLL4-216ENST00000463387 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
VGLL4-216ENST00000463387 CFTRP13569 1480 aa13.36□□□□□ -0.27
VGLL4-216ENST00000463387 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
VGLL4-216ENST00000463387 FANCD2Q9BXW9 1451 aa13.3□□□□□ -0.28
VGLL4-216ENST00000463387 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
VGLL4-216ENST00000463387 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
VGLL4-216ENST00000463387 CUX2O14529 1486 aa13.23□□□□□ -0.29
VGLL4-216ENST00000463387 THOC2Q8NI27 1593 aaKnown RBP13.23□□□□□ -0.29
VGLL4-216ENST00000463387 PRDM2Q13029 1718 aa13.19□□□□□ -0.3
VGLL4-216ENST00000463387 WDR62O43379 1518 aa13.15□□□□□ -0.3
VGLL4-216ENST00000463387 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
VGLL4-216ENST00000463387 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
VGLL4-216ENST00000463387 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
VGLL4-216ENST00000463387 DNMBPQ6XZF7 1577 aa13.05□□□□□ -0.32
VGLL4-216ENST00000463387 CUX1P39880 1505 aa12.99□□□□□ -0.33
VGLL4-216ENST00000463387 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
VGLL4-216ENST00000463387 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
VGLL4-216ENST00000463387 SOGA1O94964 1423 aa12.96□□□□□ -0.33
VGLL4-216ENST00000463387 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.34
VGLL4-216ENST00000463387 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
VGLL4-216ENST00000463387 RAD54L2Q9Y4B4 1467 aa12.95□□□□□ -0.34
VGLL4-216ENST00000463387 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
VGLL4-216ENST00000463387 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
VGLL4-216ENST00000463387 AQRO60306 1485 aaKnown RBP eCLIP12.9□□□□□ -0.34
VGLL4-216ENST00000463387 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
VGLL4-216ENST00000463387 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
VGLL4-216ENST00000463387 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
VGLL4-216ENST00000463387 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
VGLL4-216ENST00000463387 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
VGLL4-216ENST00000463387 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
VGLL4-216ENST00000463387 FBLN2P98095 1184 aa12.83□□□□□ -0.36
VGLL4-216ENST00000463387 ABCA10Q8WWZ4 1543 aa12.81□□□□□ -0.36
VGLL4-216ENST00000463387 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
VGLL4-216ENST00000463387 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
VGLL4-216ENST00000463387 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
VGLL4-216ENST00000463387 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
VGLL4-216ENST00000463387 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
VGLL4-216ENST00000463387 WDR97A6NE52 1622 aa12.77□□□□□ -0.37
VGLL4-216ENST00000463387 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
VGLL4-216ENST00000463387 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
VGLL4-216ENST00000463387 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
VGLL4-216ENST00000463387 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
VGLL4-216ENST00000463387 KIF27Q86VH2 1401 aa12.7□□□□□ -0.38
VGLL4-216ENST00000463387 CHD1O14646 1710 aa12.68□□□□□ -0.38
VGLL4-216ENST00000463387 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
VGLL4-216ENST00000463387 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
VGLL4-216ENST00000463387 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
VGLL4-216ENST00000463387 IGF1RP08069 1367 aa12.63□□□□□ -0.39
VGLL4-216ENST00000463387 ADAMTS12P58397 1594 aa12.62□□□□□ -0.39
VGLL4-216ENST00000463387 CHIC1Q5VXU3 224 aa12.61□□□□□ -0.39
VGLL4-216ENST00000463387 GRIN2AQ12879 1464 aa12.6□□□□□ -0.39
VGLL4-216ENST00000463387 RUSC2Q8N2Y8 1516 aa12.59□□□□□ -0.39
VGLL4-216ENST00000463387 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
VGLL4-216ENST00000463387 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
VGLL4-216ENST00000463387 CUL7Q14999 1698 aa12.54□□□□□ -0.4
VGLL4-216ENST00000463387 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
VGLL4-216ENST00000463387 CEP170Q5SW79 1584 aa12.52□□□□□ -0.4
VGLL4-216ENST00000463387 NUP160Q12769 1436 aa12.52□□□□□ -0.41
VGLL4-216ENST00000463387 ARHGEF11O15085 1522 aa12.52□□□□□ -0.41
VGLL4-216ENST00000463387 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
VGLL4-216ENST00000463387 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
VGLL4-216ENST00000463387 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
VGLL4-216ENST00000463387 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
VGLL4-216ENST00000463387 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms