RNA–Protein interactions for RNA: ENST00000463277.5

SFXN5-208, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-208ENST00000463277 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
SFXN5-208ENST00000463277 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
SFXN5-208ENST00000463277 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
SFXN5-208ENST00000463277 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
SFXN5-208ENST00000463277 MYO15BQ96JP2 1530 aa20.5■□□□□ 0.87
SFXN5-208ENST00000463277 ABCC9O60706 1549 aa20.38■□□□□ 0.85
SFXN5-208ENST00000463277 NACADO15069 1562 aa20.29■□□□□ 0.84
SFXN5-208ENST00000463277 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
SFXN5-208ENST00000463277 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
SFXN5-208ENST00000463277 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
SFXN5-208ENST00000463277 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
SFXN5-208ENST00000463277 UNC13AQ9UPW8 1703 aa19.7■□□□□ 0.74
SFXN5-208ENST00000463277 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
SFXN5-208ENST00000463277 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
SFXN5-208ENST00000463277 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
SFXN5-208ENST00000463277 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
SFXN5-208ENST00000463277 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
SFXN5-208ENST00000463277 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
SFXN5-208ENST00000463277 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
SFXN5-208ENST00000463277 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
SFXN5-208ENST00000463277 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
SFXN5-208ENST00000463277 WIZO95785 1651 aa18.96■□□□□ 0.63
SFXN5-208ENST00000463277 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
SFXN5-208ENST00000463277 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
SFXN5-208ENST00000463277 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
SFXN5-208ENST00000463277 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
SFXN5-208ENST00000463277 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
SFXN5-208ENST00000463277 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
SFXN5-208ENST00000463277 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
SFXN5-208ENST00000463277 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
SFXN5-208ENST00000463277 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
SFXN5-208ENST00000463277 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
SFXN5-208ENST00000463277 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
SFXN5-208ENST00000463277 CFTRP13569 1480 aa18.24■□□□□ 0.51
SFXN5-208ENST00000463277 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
SFXN5-208ENST00000463277 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
SFXN5-208ENST00000463277 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
SFXN5-208ENST00000463277 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.48
SFXN5-208ENST00000463277 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SFXN5-208ENST00000463277 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.48
SFXN5-208ENST00000463277 TOP2BQ02880 1626 aa18■□□□□ 0.47
SFXN5-208ENST00000463277 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
SFXN5-208ENST00000463277 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
SFXN5-208ENST00000463277 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
SFXN5-208ENST00000463277 CUX1P39880 1505 aa17.9■□□□□ 0.46
SFXN5-208ENST00000463277 NESP48681 1621 aa17.9■□□□□ 0.46
SFXN5-208ENST00000463277 EEA1Q15075 1411 aa17.88■□□□□ 0.45
SFXN5-208ENST00000463277 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
SFXN5-208ENST00000463277 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
SFXN5-208ENST00000463277 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
SFXN5-208ENST00000463277 KIF21AQ7Z4S6 1674 aa17.79■□□□□ 0.44
SFXN5-208ENST00000463277 SOGA1O94964 1423 aa17.74■□□□□ 0.43
SFXN5-208ENST00000463277 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
SFXN5-208ENST00000463277 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
SFXN5-208ENST00000463277 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
SFXN5-208ENST00000463277 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
SFXN5-208ENST00000463277 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
SFXN5-208ENST00000463277 KIF21BO75037 1637 aa17.64■□□□□ 0.41
SFXN5-208ENST00000463277 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
SFXN5-208ENST00000463277 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
SFXN5-208ENST00000463277 KIF27Q86VH2 1401 aa17.63■□□□□ 0.41
SFXN5-208ENST00000463277 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
SFXN5-208ENST00000463277 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
SFXN5-208ENST00000463277 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
SFXN5-208ENST00000463277 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
SFXN5-208ENST00000463277 WDR62O43379 1518 aa17.6■□□□□ 0.41
SFXN5-208ENST00000463277 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
SFXN5-208ENST00000463277 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
SFXN5-208ENST00000463277 CUX2O14529 1486 aa17.54■□□□□ 0.4
SFXN5-208ENST00000463277 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
SFXN5-208ENST00000463277 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
SFXN5-208ENST00000463277 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
SFXN5-208ENST00000463277 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
SFXN5-208ENST00000463277 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
SFXN5-208ENST00000463277 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
SFXN5-208ENST00000463277 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
SFXN5-208ENST00000463277 IGF1RP08069 1367 aa17.46■□□□□ 0.39
SFXN5-208ENST00000463277 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
SFXN5-208ENST00000463277 CUL7Q14999 1698 aa17.43■□□□□ 0.38
SFXN5-208ENST00000463277 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
SFXN5-208ENST00000463277 GAPVD1Q14C86 1478 aa17.38■□□□□ 0.37
SFXN5-208ENST00000463277 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
SFXN5-208ENST00000463277 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
SFXN5-208ENST00000463277 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
SFXN5-208ENST00000463277 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
SFXN5-208ENST00000463277 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
SFXN5-208ENST00000463277 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
SFXN5-208ENST00000463277 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
SFXN5-208ENST00000463277 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
SFXN5-208ENST00000463277 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
SFXN5-208ENST00000463277 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
SFXN5-208ENST00000463277 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.35
SFXN5-208ENST00000463277 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
SFXN5-208ENST00000463277 CTTNBP2Q8WZ74 1663 aa17.22■□□□□ 0.35
SFXN5-208ENST00000463277 CLIP1P30622 1438 aa17.2■□□□□ 0.34
SFXN5-208ENST00000463277 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
SFXN5-208ENST00000463277 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
SFXN5-208ENST00000463277 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
SFXN5-208ENST00000463277 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
SFXN5-208ENST00000463277 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms