RNA–Protein interactions for RNA: ENST00000463083.1

SMIM29-204, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 1,487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-204ENST00000463083 NISCHQ9Y2I1 1504 aa42.39■■■■■ 4.38
SMIM29-204ENST00000463083 CCDC180Q9P1Z9 1646 aa37.34■■■■□ 3.57
SMIM29-204ENST00000463083 ABCC9O60706 1549 aa36.01■■■■□ 3.35
SMIM29-204ENST00000463083 ZCCHC6Q5VYS8 1495 aaKnown RBP35.45■■■■□ 3.27
SMIM29-204ENST00000463083 DCAF8L2P0C7V8 631 aa35.34■■■■□ 3.25
SMIM29-204ENST00000463083 DCAF1Q9Y4B6 1507 aa35.04■■■■□ 3.2
SMIM29-204ENST00000463083 NACADO15069 1562 aa34.97■■■■□ 3.19
SMIM29-204ENST00000463083 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
SMIM29-204ENST00000463083 RB1CC1Q8TDY2 1594 aa34.86■■■■□ 3.17
SMIM29-204ENST00000463083 SCRIBQ14160 1630 aa34.24■■■■□ 3.07
SMIM29-204ENST00000463083 UNC13AQ9UPW8 1703 aa34.09■■■■□ 3.05
SMIM29-204ENST00000463083 SHROOM4Q9ULL8 1493 aa34.08■■■■□ 3.05
SMIM29-204ENST00000463083 PABPN1Q86U42 306 aaKnown RBP eCLIP33.81■■■■□ 3
SMIM29-204ENST00000463083 BICRAQ9NZM4 1560 aa33.76■■■■□ 3
SMIM29-204ENST00000463083 CECR2Q9BXF3 1484 aa33■■■□□ 2.87
SMIM29-204ENST00000463083 EIF4G1Q04637 1599 aaKnown RBP32.84■■■□□ 2.85
SMIM29-204ENST00000463083 BAZ1AQ9NRL2 1556 aaPredicted RBP32.81■■■□□ 2.84
SMIM29-204ENST00000463083 SMARCA4P51532 1647 aa32.76■■■□□ 2.83
SMIM29-204ENST00000463083 MROH2BQ7Z745 1585 aa32.71■■■□□ 2.83
SMIM29-204ENST00000463083 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
SMIM29-204ENST00000463083 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
SMIM29-204ENST00000463083 SUPT5HO00267 1087 aaKnown RBP32.43■■■□□ 2.78
SMIM29-204ENST00000463083 WIZO95785 1651 aa32.42■■■□□ 2.78
SMIM29-204ENST00000463083 DNAJC5BQ9UF47 199 aa32.41■■■□□ 2.78
SMIM29-204ENST00000463083 ATAD2BQ9ULI0 1458 aa32.41■■■□□ 2.78
SMIM29-204ENST00000463083 SMARCA2P51531 1590 aa32.39■■■□□ 2.78
SMIM29-204ENST00000463083 PEG3Q9GZU2 1588 aa32.36■■■□□ 2.77
SMIM29-204ENST00000463083 NCAPD3P42695 1498 aa32.25■■■□□ 2.75
SMIM29-204ENST00000463083 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
SMIM29-204ENST00000463083 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
SMIM29-204ENST00000463083 TOP2AP11388 1531 aaKnown RBP32.07■■■□□ 2.72
SMIM29-204ENST00000463083 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
SMIM29-204ENST00000463083 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.62
SMIM29-204ENST00000463083 NESP48681 1621 aa31.35■■■□□ 2.61
SMIM29-204ENST00000463083 CFTRP13569 1480 aa31.33■■■□□ 2.61
SMIM29-204ENST00000463083 LAMC3Q9Y6N6 1575 aa31.29■■■□□ 2.6
SMIM29-204ENST00000463083 PRDM2Q13029 1718 aa31.13■■■□□ 2.57
SMIM29-204ENST00000463083 PDS5BQ9NTI5 1447 aa31.1■■■□□ 2.57
SMIM29-204ENST00000463083 FANCD2Q9BXW9 1451 aa31.05■■■□□ 2.56
SMIM29-204ENST00000463083 ERCC6Q03468 1493 aa30.99■■■□□ 2.55
SMIM29-204ENST00000463083 KIF21AQ7Z4S6 1674 aa30.98■■■□□ 2.55
SMIM29-204ENST00000463083 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
SMIM29-204ENST00000463083 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
SMIM29-204ENST00000463083 MRC2Q9UBG0 1479 aa30.73■■■□□ 2.51
SMIM29-204ENST00000463083 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
SMIM29-204ENST00000463083 URB2Q14146 1524 aaKnown RBP30.69■■■□□ 2.5
SMIM29-204ENST00000463083 THOC2Q8NI27 1593 aaKnown RBP30.66■■■□□ 2.5
SMIM29-204ENST00000463083 CUX1P39880 1505 aa30.65■■■□□ 2.5
SMIM29-204ENST00000463083 DNMBPQ6XZF7 1577 aa30.62■■■□□ 2.49
SMIM29-204ENST00000463083 TOPBP1Q92547 1522 aa30.62■■■□□ 2.49
SMIM29-204ENST00000463083 SYNJ1O43426 1573 aa30.61■■■□□ 2.49
SMIM29-204ENST00000463083 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
SMIM29-204ENST00000463083 WDR62O43379 1518 aa30.58■■■□□ 2.49
SMIM29-204ENST00000463083 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
SMIM29-204ENST00000463083 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
SMIM29-204ENST00000463083 BIVM-ERCC5R4GMW8 1640 aa30.53■■■□□ 2.48
SMIM29-204ENST00000463083 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.46
SMIM29-204ENST00000463083 POLA1P09884 1462 aaPredicted RBP30.41■■■□□ 2.46
SMIM29-204ENST00000463083 SOGA1O94964 1423 aa30.32■■■□□ 2.44
SMIM29-204ENST00000463083 CUX2O14529 1486 aa30.31■■■□□ 2.44
SMIM29-204ENST00000463083 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
SMIM29-204ENST00000463083 IFT140Q96RY7 1462 aa30.25■■■□□ 2.43
SMIM29-204ENST00000463083 TARBP1Q13395 1621 aaKnown RBP30.2■■■□□ 2.43
SMIM29-204ENST00000463083 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
SMIM29-204ENST00000463083 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
SMIM29-204ENST00000463083 TDRD9Q8NDG6 1382 aaKnown RBP30.09■■■□□ 2.41
SMIM29-204ENST00000463083 ZNF608Q9ULD9 1512 aaPredicted RBP30.09■■■□□ 2.41
SMIM29-204ENST00000463083 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
SMIM29-204ENST00000463083 AQRO60306 1485 aaKnown RBP eCLIP30.02■■■□□ 2.42e-7■■■■■ 56.2
SMIM29-204ENST00000463083 RUSC2Q8N2Y8 1516 aa29.99■■■□□ 2.39
SMIM29-204ENST00000463083 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
SMIM29-204ENST00000463083 GAPVD1Q14C86 1478 aa29.97■■■□□ 2.39
SMIM29-204ENST00000463083 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
SMIM29-204ENST00000463083 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
SMIM29-204ENST00000463083 EEA1Q15075 1411 aa29.87■■■□□ 2.37
SMIM29-204ENST00000463083 GRIN2BQ13224 1484 aa29.86■■■□□ 2.37
SMIM29-204ENST00000463083 PBRM1Q86U86 1689 aa29.85■■■□□ 2.37
SMIM29-204ENST00000463083 IGF1RP08069 1367 aa29.81■■■□□ 2.36
SMIM29-204ENST00000463083 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
SMIM29-204ENST00000463083 ERICH3Q5RHP9 1530 aa29.8■■■□□ 2.36
SMIM29-204ENST00000463083 SNAPC4Q5SXM2 1469 aa29.75■■■□□ 2.35
SMIM29-204ENST00000463083 MAGI1Q96QZ7 1491 aaPredicted RBP29.69■■■□□ 2.34
SMIM29-204ENST00000463083 CARMIL1Q5VZK9 1371 aa29.67■■■□□ 2.34
SMIM29-204ENST00000463083 CUL7Q14999 1698 aa29.67■■■□□ 2.34
SMIM29-204ENST00000463083 ADAMTS12P58397 1594 aa29.64■■■□□ 2.34
SMIM29-204ENST00000463083 FHAD1B1AJZ9 1412 aa29.63■■■□□ 2.33
SMIM29-204ENST00000463083 FBLN2P98095 1184 aa29.61■■■□□ 2.33
SMIM29-204ENST00000463083 PRXQ9BXM0 1461 aa29.59■■■□□ 2.33
SMIM29-204ENST00000463083 CHMP7Q8WUX9 453 aaPredicted RBP29.59■■■□□ 2.33
SMIM29-204ENST00000463083 EHMT2Q96KQ7 1210 aa29.59■■■□□ 2.33
SMIM29-204ENST00000463083 SYNJ2O15056 1496 aa29.57■■■□□ 2.32
SMIM29-204ENST00000463083 RAPGEF2Q9Y4G8 1499 aa29.55■■■□□ 2.32
SMIM29-204ENST00000463083 KIF21BO75037 1637 aa29.52■■■□□ 2.32
SMIM29-204ENST00000463083 CHD1O14646 1710 aa29.48■■■□□ 2.31
SMIM29-204ENST00000463083 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
SMIM29-204ENST00000463083 GOLGA3Q08378 1498 aa29.43■■■□□ 2.3
SMIM29-204ENST00000463083 LOC105371045A0A1W2PR82 267 aa29.41■■■□□ 2.3
SMIM29-204ENST00000463083 UBTFP17480 764 aaKnown RBP29.39■■■□□ 2.3
SMIM29-204ENST00000463083 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
SMIM29-204ENST00000463083 NUP160Q12769 1436 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms