RNA–Protein interactions for RNA: ENST00000462513.5

CBWD1-209, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-209ENST00000462513 AEBP2Q6ZN18 517 aaPredicted RBP16.79■□□□□ 0.28
CBWD1-209ENST00000462513 NISCHQ9Y2I1 1504 aa16.72■□□□□ 0.27
CBWD1-209ENST00000462513 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
CBWD1-209ENST00000462513 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
CBWD1-209ENST00000462513 SENP3Q9H4L4 574 aaPredicted RBP14.3□□□□□ -0.12
CBWD1-209ENST00000462513 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
CBWD1-209ENST00000462513 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
CBWD1-209ENST00000462513 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
CBWD1-209ENST00000462513 ABCC9O60706 1549 aa13.83□□□□□ -0.2
CBWD1-209ENST00000462513 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
CBWD1-209ENST00000462513 NACADO15069 1562 aa13.71□□□□□ -0.21
CBWD1-209ENST00000462513 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
CBWD1-209ENST00000462513 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
CBWD1-209ENST00000462513 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
CBWD1-209ENST00000462513 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
CBWD1-209ENST00000462513 FOXD1Q16676 465 aa13.38□□□□□ -0.27
CBWD1-209ENST00000462513 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
CBWD1-209ENST00000462513 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
CBWD1-209ENST00000462513 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
CBWD1-209ENST00000462513 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
CBWD1-209ENST00000462513 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
CBWD1-209ENST00000462513 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
CBWD1-209ENST00000462513 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-209ENST00000462513 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
CBWD1-209ENST00000462513 SUPT5HO00267 1087 aaKnown RBP12.81□□□□□ -0.36
CBWD1-209ENST00000462513 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
CBWD1-209ENST00000462513 WIZO95785 1651 aa12.8□□□□□ -0.36
CBWD1-209ENST00000462513 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
CBWD1-209ENST00000462513 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
CBWD1-209ENST00000462513 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
CBWD1-209ENST00000462513 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
CBWD1-209ENST00000462513 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
CBWD1-209ENST00000462513 NCAPD3P42695 1498 aa12.61□□□□□ -0.39
CBWD1-209ENST00000462513 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
CBWD1-209ENST00000462513 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
CBWD1-209ENST00000462513 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
CBWD1-209ENST00000462513 MSH5O43196 834 aa12.54□□□□□ -0.4
CBWD1-209ENST00000462513 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
CBWD1-209ENST00000462513 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
CBWD1-209ENST00000462513 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
CBWD1-209ENST00000462513 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
CBWD1-209ENST00000462513 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
CBWD1-209ENST00000462513 ADRA2BP18089 450 aa12.36□□□□□ -0.43
CBWD1-209ENST00000462513 CFTRP13569 1480 aa12.29□□□□□ -0.44
CBWD1-209ENST00000462513 LAMC3Q9Y6N6 1575 aa12.25□□□□□ -0.45
CBWD1-209ENST00000462513 CADPSQ9ULU8 1353 aa12.24□□□□□ -0.45
CBWD1-209ENST00000462513 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
CBWD1-209ENST00000462513 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
CBWD1-209ENST00000462513 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.47
CBWD1-209ENST00000462513 WRNQ14191 1432 aaPredicted RBP eCLIP12.13□□□□□ -0.47
CBWD1-209ENST00000462513 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
CBWD1-209ENST00000462513 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
CBWD1-209ENST00000462513 NESP48681 1621 aa12.11□□□□□ -0.47
CBWD1-209ENST00000462513 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
CBWD1-209ENST00000462513 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
CBWD1-209ENST00000462513 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
CBWD1-209ENST00000462513 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
CBWD1-209ENST00000462513 CUX1P39880 1505 aa12.06□□□□□ -0.48
CBWD1-209ENST00000462513 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
CBWD1-209ENST00000462513 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
CBWD1-209ENST00000462513 TOPBP1Q92547 1522 aa11.98□□□□□ -0.49
CBWD1-209ENST00000462513 EEA1Q15075 1411 aa11.97□□□□□ -0.49
CBWD1-209ENST00000462513 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.5
CBWD1-209ENST00000462513 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
CBWD1-209ENST00000462513 FGD5Q6ZNL6 1462 aa11.93□□□□□ -0.5
CBWD1-209ENST00000462513 WDR62O43379 1518 aa11.91□□□□□ -0.5
CBWD1-209ENST00000462513 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
CBWD1-209ENST00000462513 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
CBWD1-209ENST00000462513 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
CBWD1-209ENST00000462513 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
CBWD1-209ENST00000462513 SOGA1O94964 1423 aa11.88□□□□□ -0.51
CBWD1-209ENST00000462513 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
CBWD1-209ENST00000462513 TARBP1Q13395 1621 aaKnown RBP11.85□□□□□ -0.51
CBWD1-209ENST00000462513 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
CBWD1-209ENST00000462513 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
CBWD1-209ENST00000462513 KIF21BO75037 1637 aa11.84□□□□□ -0.51
CBWD1-209ENST00000462513 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
CBWD1-209ENST00000462513 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
CBWD1-209ENST00000462513 CUX2O14529 1486 aa11.81□□□□□ -0.52
CBWD1-209ENST00000462513 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
CBWD1-209ENST00000462513 FAM9AQ8IZU1 332 aaPredicted RBP11.79□□□□□ -0.52
CBWD1-209ENST00000462513 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
CBWD1-209ENST00000462513 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
CBWD1-209ENST00000462513 CUL7Q14999 1698 aa11.78□□□□□ -0.52
CBWD1-209ENST00000462513 PBRM1Q86U86 1689 aa11.77□□□□□ -0.53
CBWD1-209ENST00000462513 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
CBWD1-209ENST00000462513 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
CBWD1-209ENST00000462513 LOC105371045A0A1W2PR82 267 aa11.73□□□□□ -0.53
CBWD1-209ENST00000462513 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
CBWD1-209ENST00000462513 IGF1RP08069 1367 aa11.72□□□□□ -0.53
CBWD1-209ENST00000462513 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
CBWD1-209ENST00000462513 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
CBWD1-209ENST00000462513 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
CBWD1-209ENST00000462513 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
CBWD1-209ENST00000462513 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
CBWD1-209ENST00000462513 GRIN2BQ13224 1484 aa11.66□□□□□ -0.54
CBWD1-209ENST00000462513 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
CBWD1-209ENST00000462513 CTTNBP2Q8WZ74 1663 aa11.65□□□□□ -0.54
CBWD1-209ENST00000462513 ADAMTS12P58397 1594 aa11.64□□□□□ -0.55
CBWD1-209ENST00000462513 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms