RNA–Protein interactions for RNA: ENST00000462315.5

PARP9-202, Transcript of poly(ADP-ribose) polymerase family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARP9, Length 6,769 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP9-202ENST00000462315 NISCHQ9Y2I1 1504 aa17.1■□□□□ 0.33
PARP9-202ENST00000462315 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
PARP9-202ENST00000462315 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
PARP9-202ENST00000462315 ABCC9O60706 1549 aa14.68□□□□□ -0.06
PARP9-202ENST00000462315 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
PARP9-202ENST00000462315 NACADO15069 1562 aa14.41□□□□□ -0.1
PARP9-202ENST00000462315 RB1CC1Q8TDY2 1594 aa14.4□□□□□ -0.1
PARP9-202ENST00000462315 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
PARP9-202ENST00000462315 ZCCHC6Q5VYS8 1495 aaKnown RBP14.23□□□□□ -0.13
PARP9-202ENST00000462315 SHROOM4Q9ULL8 1493 aa14.08□□□□□ -0.16
PARP9-202ENST00000462315 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
PARP9-202ENST00000462315 SCRIBQ14160 1630 aa13.71□□□□□ -0.21
PARP9-202ENST00000462315 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
PARP9-202ENST00000462315 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
PARP9-202ENST00000462315 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
PARP9-202ENST00000462315 CECR2Q9BXF3 1484 aa13.33□□□□□ -0.28
PARP9-202ENST00000462315 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
PARP9-202ENST00000462315 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
PARP9-202ENST00000462315 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
PARP9-202ENST00000462315 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
PARP9-202ENST00000462315 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
PARP9-202ENST00000462315 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
PARP9-202ENST00000462315 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
PARP9-202ENST00000462315 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
PARP9-202ENST00000462315 CC2D2AQ9P2K1 1620 aa13.11□□□□□ -0.31
PARP9-202ENST00000462315 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
PARP9-202ENST00000462315 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
PARP9-202ENST00000462315 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
PARP9-202ENST00000462315 ERCC6Q03468 1493 aa13.02□□□□□ -0.33
PARP9-202ENST00000462315 CADPSQ9ULU8 1353 aa12.99□□□□□ -0.33
PARP9-202ENST00000462315 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
PARP9-202ENST00000462315 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
PARP9-202ENST00000462315 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
PARP9-202ENST00000462315 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.34
PARP9-202ENST00000462315 ABCC8Q09428 1581 aa12.92□□□□□ -0.34
PARP9-202ENST00000462315 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
PARP9-202ENST00000462315 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
PARP9-202ENST00000462315 CFTRP13569 1480 aa12.77□□□□□ -0.37
PARP9-202ENST00000462315 CUX2O14529 1486 aa12.76□□□□□ -0.37
PARP9-202ENST00000462315 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
PARP9-202ENST00000462315 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.37
PARP9-202ENST00000462315 CCDC88BA6NC98 1476 aa12.71□□□□□ -0.38
PARP9-202ENST00000462315 WIZO95785 1651 aa12.67□□□□□ -0.38
PARP9-202ENST00000462315 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
PARP9-202ENST00000462315 WRNQ14191 1432 aaPredicted RBP eCLIP12.6□□□□□ -0.39
PARP9-202ENST00000462315 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
PARP9-202ENST00000462315 EEA1Q15075 1411 aa12.52□□□□□ -0.41
PARP9-202ENST00000462315 SOGA1O94964 1423 aa12.5□□□□□ -0.41
PARP9-202ENST00000462315 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
PARP9-202ENST00000462315 NESP48681 1621 aa12.48□□□□□ -0.41
PARP9-202ENST00000462315 KIF27Q86VH2 1401 aa12.48□□□□□ -0.41
PARP9-202ENST00000462315 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
PARP9-202ENST00000462315 OSCARQ8IYS5 282 aa12.46□□□□□ -0.42
PARP9-202ENST00000462315 WDR62O43379 1518 aa12.43□□□□□ -0.42
PARP9-202ENST00000462315 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
PARP9-202ENST00000462315 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
PARP9-202ENST00000462315 FBLN2P98095 1184 aa12.42□□□□□ -0.42
PARP9-202ENST00000462315 GRIN2BQ13224 1484 aa12.38□□□□□ -0.43
PARP9-202ENST00000462315 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
PARP9-202ENST00000462315 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.43
PARP9-202ENST00000462315 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
PARP9-202ENST00000462315 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
PARP9-202ENST00000462315 URB2Q14146 1524 aaKnown RBP12.31□□□□□ -0.44
PARP9-202ENST00000462315 GAPVD1Q14C86 1478 aa12.3□□□□□ -0.44
PARP9-202ENST00000462315 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
PARP9-202ENST00000462315 ABCA10Q8WWZ4 1543 aa12.3□□□□□ -0.44
PARP9-202ENST00000462315 FHAD1B1AJZ9 1412 aa12.29□□□□□ -0.44
PARP9-202ENST00000462315 TDRD9Q8NDG6 1382 aaKnown RBP12.28□□□□□ -0.44
PARP9-202ENST00000462315 CARMIL2Q6F5E8 1435 aa12.27□□□□□ -0.45
PARP9-202ENST00000462315 APLP2Q06481 763 aa12.24□□□□□ -0.45
PARP9-202ENST00000462315 THOC2Q8NI27 1593 aaKnown RBP12.24□□□□□ -0.45
PARP9-202ENST00000462315 UBTFP17480 764 aaKnown RBP12.24□□□□□ -0.45
PARP9-202ENST00000462315 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
PARP9-202ENST00000462315 TOP2BQ02880 1626 aa12.24□□□□□ -0.45
PARP9-202ENST00000462315 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
PARP9-202ENST00000462315 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
PARP9-202ENST00000462315 SYNJ2O15056 1496 aa12.21□□□□□ -0.46
PARP9-202ENST00000462315 ERICH3Q5RHP9 1530 aa12.2□□□□□ -0.46
PARP9-202ENST00000462315 CDK11AQ9UQ88 783 aaPredicted RBP12.19□□□□□ -0.46
PARP9-202ENST00000462315 CUX1P39880 1505 aa12.19□□□□□ -0.46
PARP9-202ENST00000462315 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
PARP9-202ENST00000462315 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
PARP9-202ENST00000462315 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
PARP9-202ENST00000462315 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.46
PARP9-202ENST00000462315 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
PARP9-202ENST00000462315 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
PARP9-202ENST00000462315 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
PARP9-202ENST00000462315 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
PARP9-202ENST00000462315 SNAPC4Q5SXM2 1469 aa12.11□□□□□ -0.47
PARP9-202ENST00000462315 IGF1RP08069 1367 aa12.1□□□□□ -0.47
PARP9-202ENST00000462315 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
PARP9-202ENST00000462315 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
PARP9-202ENST00000462315 CUL7Q14999 1698 aa12.05□□□□□ -0.48
PARP9-202ENST00000462315 GRIN2AQ12879 1464 aa12.05□□□□□ -0.48
PARP9-202ENST00000462315 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
PARP9-202ENST00000462315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
PARP9-202ENST00000462315 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
PARP9-202ENST00000462315 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
PARP9-202ENST00000462315 PTPRGP23470 1445 aa12.01□□□□□ -0.49
PARP9-202ENST00000462315 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms