RNA–Protein interactions for RNA: ENST00000462240.3

RN7SL517P-201, Transcript of RNA, 7SL, cytoplasmic 517, pseudogene, humanhuman

BASIC

Gene RN7SL517P, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL517P-201ENST00000462240 NISCHQ9Y2I1 1504 aa11.17□□□□□ -0.62
RN7SL517P-201ENST00000462240 CCDC180Q9P1Z9 1646 aa9.77□□□□□ -0.85
RN7SL517P-201ENST00000462240 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
RN7SL517P-201ENST00000462240 DCAF1Q9Y4B6 1507 aa9.37□□□□□ -0.91
RN7SL517P-201ENST00000462240 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
RN7SL517P-201ENST00000462240 NACADO15069 1562 aa9.12□□□□□ -0.95
RN7SL517P-201ENST00000462240 ABCC9O60706 1549 aa9.05□□□□□ -0.96
RN7SL517P-201ENST00000462240 DCAF8L2P0C7V8 631 aa9.01□□□□□ -0.97
RN7SL517P-201ENST00000462240 RB1CC1Q8TDY2 1594 aa8.99□□□□□ -0.97
RN7SL517P-201ENST00000462240 SHROOM4Q9ULL8 1493 aa8.86□□□□□ -0.99
RN7SL517P-201ENST00000462240 SCRIBQ14160 1630 aa8.8□□□□□ -1
RN7SL517P-201ENST00000462240 BICRAQ9NZM4 1560 aa8.67□□□□□ -1.02
RN7SL517P-201ENST00000462240 UNC13AQ9UPW8 1703 aa8.66□□□□□ -1.02
RN7SL517P-201ENST00000462240 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.03
RN7SL517P-201ENST00000462240 RSF1Q96T23 1441 aaPredicted RBP8.64□□□□□ -1.03
RN7SL517P-201ENST00000462240 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
RN7SL517P-201ENST00000462240 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
RN7SL517P-201ENST00000462240 MROH2BQ7Z745 1585 aa8.55□□□□□ -1.04
RN7SL517P-201ENST00000462240 PEG3Q9GZU2 1588 aa8.55□□□□□ -1.04
RN7SL517P-201ENST00000462240 SMARCA4P51532 1647 aa8.54□□□□□ -1.04
RN7SL517P-201ENST00000462240 PABPN1Q86U42 306 aaKnown RBP eCLIP8.51□□□□□ -1.05
RN7SL517P-201ENST00000462240 SMARCA2P51531 1590 aa8.48□□□□□ -1.05
RN7SL517P-201ENST00000462240 TOP2AP11388 1531 aaKnown RBP8.46□□□□□ -1.05
RN7SL517P-201ENST00000462240 NCAPD3P42695 1498 aa8.44□□□□□ -1.06
RN7SL517P-201ENST00000462240 ATAD2BQ9ULI0 1458 aa8.44□□□□□ -1.06
RN7SL517P-201ENST00000462240 WIZO95785 1651 aa8.43□□□□□ -1.06
RN7SL517P-201ENST00000462240 EIF4G1Q04637 1599 aaKnown RBP8.41□□□□□ -1.06
RN7SL517P-201ENST00000462240 HMGXB3Q12766 1538 aa8.41□□□□□ -1.06
RN7SL517P-201ENST00000462240 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
RN7SL517P-201ENST00000462240 CCDC88BA6NC98 1476 aa8.33□□□□□ -1.08
RN7SL517P-201ENST00000462240 CHIC1Q5VXU3 224 aa8.33□□□□□ -1.08
RN7SL517P-201ENST00000462240 CC2D2AQ9P2K1 1620 aa8.25□□□□□ -1.09
RN7SL517P-201ENST00000462240 CFTRP13569 1480 aa8.22□□□□□ -1.09
RN7SL517P-201ENST00000462240 TRIM41Q8WV44 630 aa8.18□□□□□ -1.1
RN7SL517P-201ENST00000462240 CADPSQ9ULU8 1353 aa8.18□□□□□ -1.1
RN7SL517P-201ENST00000462240 EEA1Q15075 1411 aa8.14□□□□□ -1.11
RN7SL517P-201ENST00000462240 WRNQ14191 1432 aaPredicted RBP eCLIP8.13□□□□□ -1.11
RN7SL517P-201ENST00000462240 LAMC3Q9Y6N6 1575 aa8.11□□□□□ -1.11
RN7SL517P-201ENST00000462240 PRDM2Q13029 1718 aa8.09□□□□□ -1.11
RN7SL517P-201ENST00000462240 TOP2BQ02880 1626 aa8.08□□□□□ -1.12
RN7SL517P-201ENST00000462240 ABCC8Q09428 1581 aa8.07□□□□□ -1.12
RN7SL517P-201ENST00000462240 PDS5BQ9NTI5 1447 aa8.06□□□□□ -1.12
RN7SL517P-201ENST00000462240 BIVM-ERCC5R4GMW8 1640 aa8.06□□□□□ -1.12
RN7SL517P-201ENST00000462240 SYNJ1O43426 1573 aa8.03□□□□□ -1.12
RN7SL517P-201ENST00000462240 FANCD2Q9BXW9 1451 aa8.03□□□□□ -1.12
RN7SL517P-201ENST00000462240 CUX1P39880 1505 aa8.01□□□□□ -1.13
RN7SL517P-201ENST00000462240 CSRNP3Q8WYN3 585 aa7.99□□□□□ -1.13
RN7SL517P-201ENST00000462240 CEP164Q9UPV0 1460 aa7.99□□□□□ -1.13
RN7SL517P-201ENST00000462240 DNMBPQ6XZF7 1577 aa7.98□□□□□ -1.13
RN7SL517P-201ENST00000462240 SOGA1O94964 1423 aa7.96□□□□□ -1.13
RN7SL517P-201ENST00000462240 KIF27Q86VH2 1401 aa7.96□□□□□ -1.13
RN7SL517P-201ENST00000462240 DNAJC5BQ9UF47 199 aa7.96□□□□□ -1.14
RN7SL517P-201ENST00000462240 TOPBP1Q92547 1522 aa7.94□□□□□ -1.14
RN7SL517P-201ENST00000462240 NESP48681 1621 aa7.94□□□□□ -1.14
RN7SL517P-201ENST00000462240 ABCA10Q8WWZ4 1543 aa7.93□□□□□ -1.14
RN7SL517P-201ENST00000462240 KIF21BO75037 1637 aa7.93□□□□□ -1.14
RN7SL517P-201ENST00000462240 TNIKQ9UKE5 1360 aa7.93□□□□□ -1.14
RN7SL517P-201ENST00000462240 ERICH3Q5RHP9 1530 aa7.93□□□□□ -1.14
RN7SL517P-201ENST00000462240 GOLGA3Q08378 1498 aa7.92□□□□□ -1.14
RN7SL517P-201ENST00000462240 FGD5Q6ZNL6 1462 aa7.92□□□□□ -1.14
RN7SL517P-201ENST00000462240 PRXQ9BXM0 1461 aa7.92□□□□□ -1.14
RN7SL517P-201ENST00000462240 POLA1P09884 1462 aaPredicted RBP7.91□□□□□ -1.14
RN7SL517P-201ENST00000462240 WDR97A6NE52 1622 aa7.9□□□□□ -1.14
RN7SL517P-201ENST00000462240 URB2Q14146 1524 aaKnown RBP7.9□□□□□ -1.14
RN7SL517P-201ENST00000462240 MRC2Q9UBG0 1479 aa7.9□□□□□ -1.14
RN7SL517P-201ENST00000462240 LOC105371045A0A1W2PR82 267 aa7.9□□□□□ -1.14
RN7SL517P-201ENST00000462240 RUSC2Q8N2Y8 1516 aa7.88□□□□□ -1.15
RN7SL517P-201ENST00000462240 IGF1RP08069 1367 aa7.88□□□□□ -1.15
RN7SL517P-201ENST00000462240 WDR62O43379 1518 aa7.88□□□□□ -1.15
RN7SL517P-201ENST00000462240 FAM9AQ8IZU1 332 aaPredicted RBP7.87□□□□□ -1.15
RN7SL517P-201ENST00000462240 CUX2O14529 1486 aa7.87□□□□□ -1.15
RN7SL517P-201ENST00000462240 KIF21AQ7Z4S6 1674 aa7.85□□□□□ -1.15
RN7SL517P-201ENST00000462240 IFT140Q96RY7 1462 aa7.84□□□□□ -1.15
RN7SL517P-201ENST00000462240 RAPGEF2Q9Y4G8 1499 aa7.83□□□□□ -1.16
RN7SL517P-201ENST00000462240 CARMIL1Q5VZK9 1371 aa7.83□□□□□ -1.16
RN7SL517P-201ENST00000462240 TARBP1Q13395 1621 aaKnown RBP7.82□□□□□ -1.16
RN7SL517P-201ENST00000462240 CUL7Q14999 1698 aa7.82□□□□□ -1.16
RN7SL517P-201ENST00000462240 ABCA5Q8WWZ7 1642 aa7.81□□□□□ -1.16
RN7SL517P-201ENST00000462240 ERCC6Q03468 1493 aa7.81□□□□□ -1.16
RN7SL517P-201ENST00000462240 CEP162Q5TB80 1403 aa7.81□□□□□ -1.16
RN7SL517P-201ENST00000462240 GAPVD1Q14C86 1478 aa7.81□□□□□ -1.16
RN7SL517P-201ENST00000462240 RAD54L2Q9Y4B4 1467 aa7.81□□□□□ -1.16
RN7SL517P-201ENST00000462240 UBTFP17480 764 aaKnown RBP7.8□□□□□ -1.16
RN7SL517P-201ENST00000462240 THOC2Q8NI27 1593 aaKnown RBP7.8□□□□□ -1.16
RN7SL517P-201ENST00000462240 CLIP1P30622 1438 aa7.78□□□□□ -1.16
RN7SL517P-201ENST00000462240 GRIN2BQ13224 1484 aa7.77□□□□□ -1.17
RN7SL517P-201ENST00000462240 FHAD1B1AJZ9 1412 aa7.77□□□□□ -1.17
RN7SL517P-201ENST00000462240 TDRD9Q8NDG6 1382 aaKnown RBP7.74□□□□□ -1.17
RN7SL517P-201ENST00000462240 MAGI1Q96QZ7 1491 aaPredicted RBP7.74□□□□□ -1.17
RN7SL517P-201ENST00000462240 VPS8Q8N3P4 1428 aa7.73□□□□□ -1.17
RN7SL517P-201ENST00000462240 EFCAB5A4FU69 1503 aa7.72□□□□□ -1.17
RN7SL517P-201ENST00000462240 TRIM26Q12899 539 aaPredicted RBP7.7□□□□□ -1.18
RN7SL517P-201ENST00000462240 ADAMTS12P58397 1594 aa7.7□□□□□ -1.18
RN7SL517P-201ENST00000462240 AQRO60306 1485 aaKnown RBP eCLIP7.69□□□□□ -1.18
RN7SL517P-201ENST00000462240 MAP3K1Q13233 1512 aa7.69□□□□□ -1.18
RN7SL517P-201ENST00000462240 ARHGAP35Q9NRY4 1499 aa7.68□□□□□ -1.18
RN7SL517P-201ENST00000462240 PBRM1Q86U86 1689 aa7.68□□□□□ -1.18
RN7SL517P-201ENST00000462240 SYNJ2O15056 1496 aa7.68□□□□□ -1.18
RN7SL517P-201ENST00000462240 ZNF608Q9ULD9 1512 aaPredicted RBP7.68□□□□□ -1.18
RN7SL517P-201ENST00000462240 EIF4G3O43432 1585 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms