RNA–Protein interactions for RNA: ENST00000462072.1

AMPH-206, Transcript of amphiphysin, humanhuman

TSL 4

Gene AMPH, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-206ENST00000462072 NISCHQ9Y2I1 1504 aa37.08■■■■□ 3.53
AMPH-206ENST00000462072 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
AMPH-206ENST00000462072 ABCC9O60706 1549 aa31.72■■■□□ 2.67
AMPH-206ENST00000462072 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.55
AMPH-206ENST00000462072 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
AMPH-206ENST00000462072 NACADO15069 1562 aa30.71■■■□□ 2.51
AMPH-206ENST00000462072 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
AMPH-206ENST00000462072 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
AMPH-206ENST00000462072 MYO15BQ96JP2 1530 aa30.62■■■□□ 2.49
AMPH-206ENST00000462072 UNC13AQ9UPW8 1703 aa30.09■■■□□ 2.41
AMPH-206ENST00000462072 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
AMPH-206ENST00000462072 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
AMPH-206ENST00000462072 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
AMPH-206ENST00000462072 SHROOM4Q9ULL8 1493 aa29.63■■■□□ 2.33
AMPH-206ENST00000462072 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
AMPH-206ENST00000462072 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
AMPH-206ENST00000462072 SMARCA4P51532 1647 aa28.74■■■□□ 2.19
AMPH-206ENST00000462072 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
AMPH-206ENST00000462072 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
AMPH-206ENST00000462072 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
AMPH-206ENST00000462072 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
AMPH-206ENST00000462072 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
AMPH-206ENST00000462072 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
AMPH-206ENST00000462072 RSF1Q96T23 1441 aaPredicted RBP28.4■■■□□ 2.14
AMPH-206ENST00000462072 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
AMPH-206ENST00000462072 WIZO95785 1651 aa28.38■■■□□ 2.13
AMPH-206ENST00000462072 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
AMPH-206ENST00000462072 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
AMPH-206ENST00000462072 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
AMPH-206ENST00000462072 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
AMPH-206ENST00000462072 SUPT5HO00267 1087 aaKnown RBP28.04■■■□□ 2.08
AMPH-206ENST00000462072 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.03
AMPH-206ENST00000462072 NESP48681 1621 aa27.57■■■□□ 2
AMPH-206ENST00000462072 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
AMPH-206ENST00000462072 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
AMPH-206ENST00000462072 CFTRP13569 1480 aa27.44■■□□□ 1.98
AMPH-206ENST00000462072 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
AMPH-206ENST00000462072 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
AMPH-206ENST00000462072 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
AMPH-206ENST00000462072 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
AMPH-206ENST00000462072 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
AMPH-206ENST00000462072 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
AMPH-206ENST00000462072 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
AMPH-206ENST00000462072 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
AMPH-206ENST00000462072 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
AMPH-206ENST00000462072 WDR62O43379 1518 aa26.95■■□□□ 1.9
AMPH-206ENST00000462072 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
AMPH-206ENST00000462072 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
AMPH-206ENST00000462072 TOPBP1Q92547 1522 aa26.86■■□□□ 1.89
AMPH-206ENST00000462072 CUX1P39880 1505 aa26.83■■□□□ 1.89
AMPH-206ENST00000462072 CUX2O14529 1486 aa26.81■■□□□ 1.88
AMPH-206ENST00000462072 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
AMPH-206ENST00000462072 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
AMPH-206ENST00000462072 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
AMPH-206ENST00000462072 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
AMPH-206ENST00000462072 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
AMPH-206ENST00000462072 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
AMPH-206ENST00000462072 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
AMPH-206ENST00000462072 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
AMPH-206ENST00000462072 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
AMPH-206ENST00000462072 SOGA1O94964 1423 aa26.52■■□□□ 1.84
AMPH-206ENST00000462072 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
AMPH-206ENST00000462072 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
AMPH-206ENST00000462072 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
AMPH-206ENST00000462072 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
AMPH-206ENST00000462072 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
AMPH-206ENST00000462072 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
AMPH-206ENST00000462072 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
AMPH-206ENST00000462072 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
AMPH-206ENST00000462072 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.8
AMPH-206ENST00000462072 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
AMPH-206ENST00000462072 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
AMPH-206ENST00000462072 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
AMPH-206ENST00000462072 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
AMPH-206ENST00000462072 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
AMPH-206ENST00000462072 RUSC2Q8N2Y8 1516 aa26.12■■□□□ 1.77
AMPH-206ENST00000462072 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
AMPH-206ENST00000462072 MAGI1Q96QZ7 1491 aaPredicted RBP26.06■■□□□ 1.76
AMPH-206ENST00000462072 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
AMPH-206ENST00000462072 CHD1O14646 1710 aa26.02■■□□□ 1.76
AMPH-206ENST00000462072 CUL7Q14999 1698 aa25.99■■□□□ 1.75
AMPH-206ENST00000462072 IGF1RP08069 1367 aa25.98■■□□□ 1.75
AMPH-206ENST00000462072 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
AMPH-206ENST00000462072 EEA1Q15075 1411 aa25.95■■□□□ 1.74
AMPH-206ENST00000462072 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
AMPH-206ENST00000462072 FAM9AQ8IZU1 332 aaPredicted RBP25.93■■□□□ 1.74
AMPH-206ENST00000462072 FBLN2P98095 1184 aa25.91■■□□□ 1.74
AMPH-206ENST00000462072 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
AMPH-206ENST00000462072 CARMIL1Q5VZK9 1371 aa25.86■■□□□ 1.73
AMPH-206ENST00000462072 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
AMPH-206ENST00000462072 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.73
AMPH-206ENST00000462072 PRXQ9BXM0 1461 aa25.78■■□□□ 1.72
AMPH-206ENST00000462072 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
AMPH-206ENST00000462072 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
AMPH-206ENST00000462072 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
AMPH-206ENST00000462072 KIF21BO75037 1637 aa25.72■■□□□ 1.71
AMPH-206ENST00000462072 NUP160Q12769 1436 aa25.7■■□□□ 1.7
AMPH-206ENST00000462072 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
AMPH-206ENST00000462072 CTTNBP2Q8WZ74 1663 aa25.62■■□□□ 1.69
AMPH-206ENST00000462072 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms