RNA–Protein interactions for RNA: ENST00000462029.1

PROM2-205, Transcript of prominin 2, humanhuman

TSL 4

Gene PROM2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-205ENST00000462029 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
PROM2-205ENST00000462029 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
PROM2-205ENST00000462029 ABCC9O60706 1549 aa21.92■■□□□ 1.1
PROM2-205ENST00000462029 ZCCHC6Q5VYS8 1495 aaKnown RBP21.78■■□□□ 1.08
PROM2-205ENST00000462029 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
PROM2-205ENST00000462029 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
PROM2-205ENST00000462029 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
PROM2-205ENST00000462029 NACADO15069 1562 aa21.46■■□□□ 1.03
PROM2-205ENST00000462029 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
PROM2-205ENST00000462029 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
PROM2-205ENST00000462029 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.93
PROM2-205ENST00000462029 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
PROM2-205ENST00000462029 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
PROM2-205ENST00000462029 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
PROM2-205ENST00000462029 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
PROM2-205ENST00000462029 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
PROM2-205ENST00000462029 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
PROM2-205ENST00000462029 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
PROM2-205ENST00000462029 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
PROM2-205ENST00000462029 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.79
PROM2-205ENST00000462029 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
PROM2-205ENST00000462029 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
PROM2-205ENST00000462029 PEG3Q9GZU2 1588 aa19.88■□□□□ 0.77
PROM2-205ENST00000462029 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
PROM2-205ENST00000462029 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
PROM2-205ENST00000462029 WIZO95785 1651 aa19.81■□□□□ 0.76
PROM2-205ENST00000462029 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
PROM2-205ENST00000462029 BAZ1BQ9UIG0 1483 aaKnown RBP19.74■□□□□ 0.75
PROM2-205ENST00000462029 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
PROM2-205ENST00000462029 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
PROM2-205ENST00000462029 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
PROM2-205ENST00000462029 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
PROM2-205ENST00000462029 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
PROM2-205ENST00000462029 CFTRP13569 1480 aa19.22■□□□□ 0.67
PROM2-205ENST00000462029 LAMC3Q9Y6N6 1575 aa19.18■□□□□ 0.66
PROM2-205ENST00000462029 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.65
PROM2-205ENST00000462029 NESP48681 1621 aa19.08■□□□□ 0.65
PROM2-205ENST00000462029 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
PROM2-205ENST00000462029 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
PROM2-205ENST00000462029 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
PROM2-205ENST00000462029 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
PROM2-205ENST00000462029 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
PROM2-205ENST00000462029 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
PROM2-205ENST00000462029 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
PROM2-205ENST00000462029 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
PROM2-205ENST00000462029 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
PROM2-205ENST00000462029 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
PROM2-205ENST00000462029 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
PROM2-205ENST00000462029 CUX1P39880 1505 aa18.76■□□□□ 0.59
PROM2-205ENST00000462029 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
PROM2-205ENST00000462029 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
PROM2-205ENST00000462029 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
PROM2-205ENST00000462029 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
PROM2-205ENST00000462029 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
PROM2-205ENST00000462029 WDR62O43379 1518 aa18.71■□□□□ 0.59
PROM2-205ENST00000462029 THOC2Q8NI27 1593 aaKnown RBP18.69■□□□□ 0.58
PROM2-205ENST00000462029 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
PROM2-205ENST00000462029 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
PROM2-205ENST00000462029 SOGA1O94964 1423 aa18.58■□□□□ 0.57
PROM2-205ENST00000462029 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
PROM2-205ENST00000462029 CUX2O14529 1486 aa18.54■□□□□ 0.56
PROM2-205ENST00000462029 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
PROM2-205ENST00000462029 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
PROM2-205ENST00000462029 EEA1Q15075 1411 aa18.5■□□□□ 0.55
PROM2-205ENST00000462029 KIF27Q86VH2 1401 aa18.49■□□□□ 0.55
PROM2-205ENST00000462029 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.55
PROM2-205ENST00000462029 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
PROM2-205ENST00000462029 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
PROM2-205ENST00000462029 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
PROM2-205ENST00000462029 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
PROM2-205ENST00000462029 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
PROM2-205ENST00000462029 ABCA5Q8WWZ7 1642 aa18.35■□□□□ 0.53
PROM2-205ENST00000462029 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
PROM2-205ENST00000462029 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.53
PROM2-205ENST00000462029 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.52
PROM2-205ENST00000462029 GRIN2BQ13224 1484 aa18.32■□□□□ 0.52
PROM2-205ENST00000462029 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
PROM2-205ENST00000462029 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
PROM2-205ENST00000462029 IGF1RP08069 1367 aa18.3■□□□□ 0.52
PROM2-205ENST00000462029 CUL7Q14999 1698 aa18.23■□□□□ 0.51
PROM2-205ENST00000462029 PBRM1Q86U86 1689 aa18.23■□□□□ 0.51
PROM2-205ENST00000462029 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
PROM2-205ENST00000462029 MAGI1Q96QZ7 1491 aaPredicted RBP18.22■□□□□ 0.51
PROM2-205ENST00000462029 PRXQ9BXM0 1461 aa18.21■□□□□ 0.51
PROM2-205ENST00000462029 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
PROM2-205ENST00000462029 KIF21BO75037 1637 aa18.19■□□□□ 0.5
PROM2-205ENST00000462029 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
PROM2-205ENST00000462029 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
PROM2-205ENST00000462029 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
PROM2-205ENST00000462029 ADAMTS12P58397 1594 aa18.16■□□□□ 0.5
PROM2-205ENST00000462029 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
PROM2-205ENST00000462029 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
PROM2-205ENST00000462029 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
PROM2-205ENST00000462029 FBLN2P98095 1184 aa18.06■□□□□ 0.48
PROM2-205ENST00000462029 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
PROM2-205ENST00000462029 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
PROM2-205ENST00000462029 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
PROM2-205ENST00000462029 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
PROM2-205ENST00000462029 NUP160Q12769 1436 aa17.97■□□□□ 0.47
PROM2-205ENST00000462029 DNAJC5Q9H3Z4 198 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms