RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-209ENST00000461983 NISCHQ9Y2I1 1504 aa35.8■■■■□ 3.32
C1S-209ENST00000461983 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
C1S-209ENST00000461983 ABCC9O60706 1549 aa30.01■■■□□ 2.4
C1S-209ENST00000461983 ZCCHC6Q5VYS8 1495 aaKnown RBP29.96■■■□□ 2.39
C1S-209ENST00000461983 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
C1S-209ENST00000461983 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
C1S-209ENST00000461983 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
C1S-209ENST00000461983 NACADO15069 1562 aa29.5■■■□□ 2.31
C1S-209ENST00000461983 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
C1S-209ENST00000461983 SCRIBQ14160 1630 aa28.69■■■□□ 2.18
C1S-209ENST00000461983 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
C1S-209ENST00000461983 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
C1S-209ENST00000461983 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
C1S-209ENST00000461983 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.1
C1S-209ENST00000461983 BAZ1AQ9NRL2 1556 aaPredicted RBP27.75■■■□□ 2.03
C1S-209ENST00000461983 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
C1S-209ENST00000461983 SMARCA4P51532 1647 aa27.56■■■□□ 2
C1S-209ENST00000461983 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
C1S-209ENST00000461983 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
C1S-209ENST00000461983 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
C1S-209ENST00000461983 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
C1S-209ENST00000461983 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
C1S-209ENST00000461983 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
C1S-209ENST00000461983 ATAD2BQ9ULI0 1458 aa27.28■■□□□ 1.96
C1S-209ENST00000461983 WIZO95785 1651 aa27.22■■□□□ 1.95
C1S-209ENST00000461983 NCAPD3P42695 1498 aa27.21■■□□□ 1.95
C1S-209ENST00000461983 CC2D2AQ9P2K1 1620 aa27.18■■□□□ 1.94
C1S-209ENST00000461983 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
C1S-209ENST00000461983 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
C1S-209ENST00000461983 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
C1S-209ENST00000461983 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
C1S-209ENST00000461983 CCDC88BA6NC98 1476 aa26.77■■□□□ 1.88
C1S-209ENST00000461983 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
C1S-209ENST00000461983 CFTRP13569 1480 aa26.43■■□□□ 1.82
C1S-209ENST00000461983 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
C1S-209ENST00000461983 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
C1S-209ENST00000461983 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
C1S-209ENST00000461983 NESP48681 1621 aa26.14■■□□□ 1.77
C1S-209ENST00000461983 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
C1S-209ENST00000461983 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
C1S-209ENST00000461983 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
C1S-209ENST00000461983 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
C1S-209ENST00000461983 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
C1S-209ENST00000461983 ABCC8Q09428 1581 aa25.98■■□□□ 1.75
C1S-209ENST00000461983 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
C1S-209ENST00000461983 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
C1S-209ENST00000461983 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
C1S-209ENST00000461983 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
C1S-209ENST00000461983 DNMBPQ6XZF7 1577 aa25.8■■□□□ 1.72
C1S-209ENST00000461983 CUX1P39880 1505 aa25.78■■□□□ 1.72
C1S-209ENST00000461983 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
C1S-209ENST00000461983 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
C1S-209ENST00000461983 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
C1S-209ENST00000461983 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
C1S-209ENST00000461983 WDR62O43379 1518 aa25.66■■□□□ 1.7
C1S-209ENST00000461983 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
C1S-209ENST00000461983 THOC2Q8NI27 1593 aaKnown RBP25.59■■□□□ 1.69
C1S-209ENST00000461983 SOGA1O94964 1423 aa25.57■■□□□ 1.68
C1S-209ENST00000461983 EEA1Q15075 1411 aa25.57■■□□□ 1.68
C1S-209ENST00000461983 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
C1S-209ENST00000461983 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
C1S-209ENST00000461983 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
C1S-209ENST00000461983 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
C1S-209ENST00000461983 CUX2O14529 1486 aa25.4■■□□□ 1.66
C1S-209ENST00000461983 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
C1S-209ENST00000461983 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
C1S-209ENST00000461983 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
C1S-209ENST00000461983 TARBP1Q13395 1621 aaKnown RBP25.35■■□□□ 1.65
C1S-209ENST00000461983 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
C1S-209ENST00000461983 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
C1S-209ENST00000461983 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
C1S-209ENST00000461983 RUSC2Q8N2Y8 1516 aa25.25■■□□□ 1.63
C1S-209ENST00000461983 IGF1RP08069 1367 aa25.21■■□□□ 1.63
C1S-209ENST00000461983 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
C1S-209ENST00000461983 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
C1S-209ENST00000461983 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
C1S-209ENST00000461983 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.62
C1S-209ENST00000461983 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
C1S-209ENST00000461983 CARMIL1Q5VZK9 1371 aa25.11■■□□□ 1.61
C1S-209ENST00000461983 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
C1S-209ENST00000461983 CUL7Q14999 1698 aa25.09■■□□□ 1.61
C1S-209ENST00000461983 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
C1S-209ENST00000461983 KIF21BO75037 1637 aa25.08■■□□□ 1.6
C1S-209ENST00000461983 GOLGA3Q08378 1498 aa25.05■■□□□ 1.6
C1S-209ENST00000461983 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
C1S-209ENST00000461983 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
C1S-209ENST00000461983 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
C1S-209ENST00000461983 PBRM1Q86U86 1689 aa25.02■■□□□ 1.6
C1S-209ENST00000461983 UBTFP17480 764 aaKnown RBP24.98■■□□□ 1.59
C1S-209ENST00000461983 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
C1S-209ENST00000461983 SNAPC4Q5SXM2 1469 aa24.95■■□□□ 1.58
C1S-209ENST00000461983 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
C1S-209ENST00000461983 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
C1S-209ENST00000461983 TNIKQ9UKE5 1360 aa24.92■■□□□ 1.58
C1S-209ENST00000461983 SYNJ2O15056 1496 aa24.91■■□□□ 1.58
C1S-209ENST00000461983 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
C1S-209ENST00000461983 FBLN2P98095 1184 aa24.81■■□□□ 1.56
C1S-209ENST00000461983 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
C1S-209ENST00000461983 KIAA0586Q9BVV6 1533 aa24.68■■□□□ 1.54
C1S-209ENST00000461983 NUP160Q12769 1436 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms