RNA–Protein interactions for RNA: ENST00000461972.5

FAM228B-202, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 2

Gene FAM228B, Length 2,616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-202ENST00000461972 NISCHQ9Y2I1 1504 aa43.16■■■■■ 4.5
FAM228B-202ENST00000461972 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
FAM228B-202ENST00000461972 SHROOM4Q9ULL8 1493 aa36.54■■■■□ 3.44
FAM228B-202ENST00000461972 ZCCHC6Q5VYS8 1495 aaKnown RBP36.36■■■■□ 3.41
FAM228B-202ENST00000461972 DCAF8L2P0C7V8 631 aa36.18■■■■□ 3.38
FAM228B-202ENST00000461972 SUPT5HO00267 1087 aaKnown RBP35.51■■■■□ 3.28
FAM228B-202ENST00000461972 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
FAM228B-202ENST00000461972 ABCC9O60706 1549 aa34.93■■■■□ 3.18
FAM228B-202ENST00000461972 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
FAM228B-202ENST00000461972 MYO15BQ96JP2 1530 aa34.48■■■■□ 3.11
FAM228B-202ENST00000461972 NACADO15069 1562 aa34.27■■■■□ 3.08
FAM228B-202ENST00000461972 CHIC1Q5VXU3 224 aa34.17■■■■□ 3.06
FAM228B-202ENST00000461972 RSF1Q96T23 1441 aaPredicted RBP33.97■■■■□ 3.03
FAM228B-202ENST00000461972 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
FAM228B-202ENST00000461972 CECR2Q9BXF3 1484 aa33.84■■■■□ 3.01
FAM228B-202ENST00000461972 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
FAM228B-202ENST00000461972 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
FAM228B-202ENST00000461972 WIZO95785 1651 aa33.38■■■□□ 2.93
FAM228B-202ENST00000461972 PABPN1Q86U42 306 aaKnown RBP eCLIP33.37■■■□□ 2.93
FAM228B-202ENST00000461972 LOC105371045A0A1W2PR82 267 aa33.25■■■□□ 2.91
FAM228B-202ENST00000461972 BAZ1AQ9NRL2 1556 aaPredicted RBP33.14■■■□□ 2.9
FAM228B-202ENST00000461972 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
FAM228B-202ENST00000461972 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
FAM228B-202ENST00000461972 SMARCA4P51532 1647 aa32.98■■■□□ 2.87
FAM228B-202ENST00000461972 FAM9AQ8IZU1 332 aaPredicted RBP32.88■■■□□ 2.85
FAM228B-202ENST00000461972 TOP2AP11388 1531 aaKnown RBP32.74■■■□□ 2.83
FAM228B-202ENST00000461972 EHMT2Q96KQ7 1210 aa32.71■■■□□ 2.83
FAM228B-202ENST00000461972 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
FAM228B-202ENST00000461972 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
FAM228B-202ENST00000461972 EIF4G1Q04637 1599 aaKnown RBP32.56■■■□□ 2.8
FAM228B-202ENST00000461972 PCGF6Q9BYE7 350 aa32.48■■■□□ 2.79
FAM228B-202ENST00000461972 ABCC8Q09428 1581 aa32.44■■■□□ 2.78
FAM228B-202ENST00000461972 ATAD2BQ9ULI0 1458 aa32.34■■■□□ 2.77
FAM228B-202ENST00000461972 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.77
FAM228B-202ENST00000461972 BAZ1BQ9UIG0 1483 aaKnown RBP32.18■■■□□ 2.74
FAM228B-202ENST00000461972 SOGA1O94964 1423 aa32.03■■■□□ 2.72
FAM228B-202ENST00000461972 RUSC2Q8N2Y8 1516 aa31.96■■■□□ 2.71
FAM228B-202ENST00000461972 HRCP23327 699 aa31.92■■■□□ 2.7
FAM228B-202ENST00000461972 WRNQ14191 1432 aaPredicted RBP eCLIP31.89■■■□□ 2.69
FAM228B-202ENST00000461972 TRIM26Q12899 539 aaPredicted RBP31.88■■■□□ 2.69
FAM228B-202ENST00000461972 PPARGC1BQ86YN6 1023 aaKnown RBP31.84■■■□□ 2.69
FAM228B-202ENST00000461972 SYNJ1O43426 1573 aa31.79■■■□□ 2.68
FAM228B-202ENST00000461972 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
FAM228B-202ENST00000461972 CSRNP3Q8WYN3 585 aa31.73■■■□□ 2.67
FAM228B-202ENST00000461972 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
FAM228B-202ENST00000461972 UBTFP17480 764 aaKnown RBP31.58■■■□□ 2.65
FAM228B-202ENST00000461972 EEA1Q15075 1411 aa31.5■■■□□ 2.63
FAM228B-202ENST00000461972 CEP162Q5TB80 1403 aa31.48■■■□□ 2.63
FAM228B-202ENST00000461972 TTBK1Q5TCY1 1321 aaPredicted RBP31.44■■■□□ 2.62
FAM228B-202ENST00000461972 TNIKQ9UKE5 1360 aa31.44■■■□□ 2.62
FAM228B-202ENST00000461972 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
FAM228B-202ENST00000461972 TOP2BQ02880 1626 aa31.37■■■□□ 2.61
FAM228B-202ENST00000461972 CFTRP13569 1480 aa31.36■■■□□ 2.61
FAM228B-202ENST00000461972 GOLGA3Q08378 1498 aa31.35■■■□□ 2.61
FAM228B-202ENST00000461972 CUX1P39880 1505 aa31.29■■■□□ 2.6
FAM228B-202ENST00000461972 RANGAP1P46060 587 aaPredicted RBP31.28■■■□□ 2.6
FAM228B-202ENST00000461972 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
FAM228B-202ENST00000461972 RAPGEF2Q9Y4G8 1499 aa31.24■■■□□ 2.59
FAM228B-202ENST00000461972 CEP164Q9UPV0 1460 aa31.23■■■□□ 2.59
FAM228B-202ENST00000461972 CADPSQ9ULU8 1353 aa31.16■■■□□ 2.58
FAM228B-202ENST00000461972 KIF21BO75037 1637 aa31.15■■■□□ 2.58
FAM228B-202ENST00000461972 DNAJC5BQ9UF47 199 aa31.08■■■□□ 2.57
FAM228B-202ENST00000461972 CLIP1P30622 1438 aa31.03■■■□□ 2.56
FAM228B-202ENST00000461972 NESP48681 1621 aa30.97■■■□□ 2.55
FAM228B-202ENST00000461972 PRXQ9BXM0 1461 aa30.93■■■□□ 2.54
FAM228B-202ENST00000461972 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
FAM228B-202ENST00000461972 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
FAM228B-202ENST00000461972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.91■■■□□ 2.54
FAM228B-202ENST00000461972 FANCD2Q9BXW9 1451 aa30.86■■■□□ 2.53
FAM228B-202ENST00000461972 CUX2O14529 1486 aa30.83■■■□□ 2.53
FAM228B-202ENST00000461972 FGD5Q6ZNL6 1462 aa30.83■■■□□ 2.53
FAM228B-202ENST00000461972 VPS8Q8N3P4 1428 aa30.77■■■□□ 2.52
FAM228B-202ENST00000461972 ERICH3Q5RHP9 1530 aa30.76■■■□□ 2.51
FAM228B-202ENST00000461972 IGF1RP08069 1367 aa30.75■■■□□ 2.51
FAM228B-202ENST00000461972 ZEB1P37275 1124 aaPredicted RBP30.73■■■□□ 2.51
FAM228B-202ENST00000461972 RAD54L2Q9Y4B4 1467 aa30.68■■■□□ 2.5
FAM228B-202ENST00000461972 CCER1Q8TC90 406 aaPredicted RBP30.66■■■□□ 2.5
FAM228B-202ENST00000461972 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
FAM228B-202ENST00000461972 APLP2Q06481 763 aa30.6■■■□□ 2.49
FAM228B-202ENST00000461972 TOPBP1Q92547 1522 aa30.59■■■□□ 2.49
FAM228B-202ENST00000461972 CARMIL1Q5VZK9 1371 aa30.57■■■□□ 2.48
FAM228B-202ENST00000461972 HNRNPUL2Q1KMD3 747 aaKnown RBP30.56■■■□□ 2.48
FAM228B-202ENST00000461972 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
FAM228B-202ENST00000461972 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
FAM228B-202ENST00000461972 KANK4Q5T7N3 995 aaPredicted RBP30.51■■■□□ 2.48
FAM228B-202ENST00000461972 ARHGAP35Q9NRY4 1499 aa30.49■■■□□ 2.47
FAM228B-202ENST00000461972 URB2Q14146 1524 aaKnown RBP30.49■■■□□ 2.47
FAM228B-202ENST00000461972 LAMC3Q9Y6N6 1575 aa30.46■■■□□ 2.47
FAM228B-202ENST00000461972 ABCA10Q8WWZ4 1543 aa30.39■■■□□ 2.46
FAM228B-202ENST00000461972 P3H3Q8IVL6 736 aa30.38■■■□□ 2.45
FAM228B-202ENST00000461972 TDRD9Q8NDG6 1382 aaKnown RBP30.36■■■□□ 2.45
FAM228B-202ENST00000461972 PDS5BQ9NTI5 1447 aa30.33■■■□□ 2.45
FAM228B-202ENST00000461972 KIF21AQ7Z4S6 1674 aa30.31■■■□□ 2.44
FAM228B-202ENST00000461972 ATP1B4Q9UN42 357 aaPredicted RBP30.14■■■□□ 2.42
FAM228B-202ENST00000461972 WDR97A6NE52 1622 aa30.13■■■□□ 2.41
FAM228B-202ENST00000461972 FHOD3Q2V2M9 1422 aa30.1■■■□□ 2.41
FAM228B-202ENST00000461972 GAPVD1Q14C86 1478 aa30.1■■■□□ 2.41
FAM228B-202ENST00000461972 ABCA5Q8WWZ7 1642 aa30.05■■■□□ 2.4
FAM228B-202ENST00000461972 ITGAEP38570 1179 aa30.04■■■□□ 2.4
FAM228B-202ENST00000461972 CUL7Q14999 1698 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms