RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC10-205ENST00000461889 NISCHQ9Y2I1 1504 aa18.63■□□□□ 0.57
TRAPPC10-205ENST00000461889 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
TRAPPC10-205ENST00000461889 ABCC9O60706 1549 aa18.13■□□□□ 0.49
TRAPPC10-205ENST00000461889 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
TRAPPC10-205ENST00000461889 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
TRAPPC10-205ENST00000461889 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
TRAPPC10-205ENST00000461889 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
TRAPPC10-205ENST00000461889 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC10-205ENST00000461889 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRAPPC10-205ENST00000461889 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
TRAPPC10-205ENST00000461889 NACADO15069 1562 aa16.51■□□□□ 0.23
TRAPPC10-205ENST00000461889 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC10-205ENST00000461889 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
TRAPPC10-205ENST00000461889 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
TRAPPC10-205ENST00000461889 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
TRAPPC10-205ENST00000461889 CC2D2AQ9P2K1 1620 aa16.36■□□□□ 0.21
TRAPPC10-205ENST00000461889 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
TRAPPC10-205ENST00000461889 CUX2O14529 1486 aa16.15■□□□□ 0.18
TRAPPC10-205ENST00000461889 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
TRAPPC10-205ENST00000461889 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
TRAPPC10-205ENST00000461889 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
TRAPPC10-205ENST00000461889 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
TRAPPC10-205ENST00000461889 FOXD1Q16676 465 aa15.85■□□□□ 0.13
TRAPPC10-205ENST00000461889 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
TRAPPC10-205ENST00000461889 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
TRAPPC10-205ENST00000461889 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
TRAPPC10-205ENST00000461889 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
TRAPPC10-205ENST00000461889 NCAPD3P42695 1498 aa15.28■□□□□ 0.04
TRAPPC10-205ENST00000461889 NESP48681 1621 aa15.27■□□□□ 0.03
TRAPPC10-205ENST00000461889 MSH5O43196 834 aa15.24■□□□□ 0.03
TRAPPC10-205ENST00000461889 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
TRAPPC10-205ENST00000461889 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
TRAPPC10-205ENST00000461889 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC10-205ENST00000461889 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
TRAPPC10-205ENST00000461889 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
TRAPPC10-205ENST00000461889 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
TRAPPC10-205ENST00000461889 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
TRAPPC10-205ENST00000461889 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
TRAPPC10-205ENST00000461889 HMGXB3Q12766 1538 aa15.04■□□□□ -0
TRAPPC10-205ENST00000461889 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
TRAPPC10-205ENST00000461889 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
TRAPPC10-205ENST00000461889 PDS5BQ9NTI5 1447 aa15.02■□□□□ -0
TRAPPC10-205ENST00000461889 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
TRAPPC10-205ENST00000461889 ILDR1Q86SU0 546 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC10-205ENST00000461889 ARHGEF11O15085 1522 aa14.95□□□□□ -0.02
TRAPPC10-205ENST00000461889 WDR62O43379 1518 aa14.94□□□□□ -0.02
TRAPPC10-205ENST00000461889 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
TRAPPC10-205ENST00000461889 CYB5RLQ6IPT4 315 aa14.88□□□□□ -0.03
TRAPPC10-205ENST00000461889 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
TRAPPC10-205ENST00000461889 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
TRAPPC10-205ENST00000461889 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
TRAPPC10-205ENST00000461889 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
TRAPPC10-205ENST00000461889 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
TRAPPC10-205ENST00000461889 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
TRAPPC10-205ENST00000461889 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.07
TRAPPC10-205ENST00000461889 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
TRAPPC10-205ENST00000461889 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC10-205ENST00000461889 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
TRAPPC10-205ENST00000461889 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.1
TRAPPC10-205ENST00000461889 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
TRAPPC10-205ENST00000461889 CHD1O14646 1710 aa14.38□□□□□ -0.11
TRAPPC10-205ENST00000461889 CFTRP13569 1480 aa14.36□□□□□ -0.11
TRAPPC10-205ENST00000461889 KDM4FA0A1W2PPD8 638 aa14.35□□□□□ -0.11
TRAPPC10-205ENST00000461889 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
TRAPPC10-205ENST00000461889 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
TRAPPC10-205ENST00000461889 CLASP1Q7Z460 1538 aa14.26□□□□□ -0.13
TRAPPC10-205ENST00000461889 FBLN2P98095 1184 aa14.26□□□□□ -0.13
TRAPPC10-205ENST00000461889 FBXO41Q8TF61 875 aa14.25□□□□□ -0.13
TRAPPC10-205ENST00000461889 ERCC6L2Q5T890 1561 aa14.22□□□□□ -0.13
TRAPPC10-205ENST00000461889 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAPPC10-205ENST00000461889 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
TRAPPC10-205ENST00000461889 LMTK3Q96Q04 1460 aa14.15□□□□□ -0.14
TRAPPC10-205ENST00000461889 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
TRAPPC10-205ENST00000461889 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
TRAPPC10-205ENST00000461889 SOCS7O14512 581 aa14.12□□□□□ -0.15
TRAPPC10-205ENST00000461889 KIF13AQ9H1H9 1805 aa14.12□□□□□ -0.15
TRAPPC10-205ENST00000461889 TARBP1Q13395 1621 aaKnown RBP14.11□□□□□ -0.15
TRAPPC10-205ENST00000461889 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
TRAPPC10-205ENST00000461889 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
TRAPPC10-205ENST00000461889 PRDM2Q13029 1718 aa14.05□□□□□ -0.16
TRAPPC10-205ENST00000461889 WIZO95785 1651 aa14.04□□□□□ -0.16
TRAPPC10-205ENST00000461889 CHMP7Q8WUX9 453 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC10-205ENST00000461889 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
TRAPPC10-205ENST00000461889 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
TRAPPC10-205ENST00000461889 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
TRAPPC10-205ENST00000461889 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC10-205ENST00000461889 KDM6BO15054 1643 aa13.98□□□□□ -0.17
TRAPPC10-205ENST00000461889 ILDR2Q71H61 639 aa13.96□□□□□ -0.17
TRAPPC10-205ENST00000461889 ABCC10Q5T3U5 1492 aa13.95□□□□□ -0.18
TRAPPC10-205ENST00000461889 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
TRAPPC10-205ENST00000461889 ADGRL1O94910 1474 aa13.94□□□□□ -0.18
TRAPPC10-205ENST00000461889 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
TRAPPC10-205ENST00000461889 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
TRAPPC10-205ENST00000461889 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
TRAPPC10-205ENST00000461889 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC10-205ENST00000461889 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
TRAPPC10-205ENST00000461889 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
TRAPPC10-205ENST00000461889 ADRA2BP18089 450 aa13.86□□□□□ -0.19
TRAPPC10-205ENST00000461889 SOGA1O94964 1423 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms