RNA–Protein interactions for RNA: ENST00000461778.5

NR1H3-215, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-215ENST00000461778 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.3
NR1H3-215ENST00000461778 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
NR1H3-215ENST00000461778 ABCC9O60706 1549 aa25.77■■□□□ 1.72
NR1H3-215ENST00000461778 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
NR1H3-215ENST00000461778 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.54
NR1H3-215ENST00000461778 RB1CC1Q8TDY2 1594 aa24.63■■□□□ 1.53
NR1H3-215ENST00000461778 NACADO15069 1562 aa24.54■■□□□ 1.52
NR1H3-215ENST00000461778 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
NR1H3-215ENST00000461778 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
NR1H3-215ENST00000461778 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
NR1H3-215ENST00000461778 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
NR1H3-215ENST00000461778 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
NR1H3-215ENST00000461778 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
NR1H3-215ENST00000461778 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
NR1H3-215ENST00000461778 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
NR1H3-215ENST00000461778 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
NR1H3-215ENST00000461778 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
NR1H3-215ENST00000461778 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
NR1H3-215ENST00000461778 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.29
NR1H3-215ENST00000461778 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
NR1H3-215ENST00000461778 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
NR1H3-215ENST00000461778 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
NR1H3-215ENST00000461778 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
NR1H3-215ENST00000461778 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
NR1H3-215ENST00000461778 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
NR1H3-215ENST00000461778 SMARCA2P51531 1590 aa22.57■■□□□ 1.2
NR1H3-215ENST00000461778 WIZO95785 1651 aa22.55■■□□□ 1.2
NR1H3-215ENST00000461778 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
NR1H3-215ENST00000461778 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
NR1H3-215ENST00000461778 PEG3Q9GZU2 1588 aa22.41■■□□□ 1.18
NR1H3-215ENST00000461778 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
NR1H3-215ENST00000461778 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
NR1H3-215ENST00000461778 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
NR1H3-215ENST00000461778 NESP48681 1621 aa22.2■■□□□ 1.14
NR1H3-215ENST00000461778 CUX2O14529 1486 aa22.11■■□□□ 1.13
NR1H3-215ENST00000461778 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
NR1H3-215ENST00000461778 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.13
NR1H3-215ENST00000461778 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
NR1H3-215ENST00000461778 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
NR1H3-215ENST00000461778 DNAJC5Q9H3Z4 198 aa21.92■■□□□ 1.1
NR1H3-215ENST00000461778 THOC2Q8NI27 1593 aaKnown RBP21.83■■□□□ 1.09
NR1H3-215ENST00000461778 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
NR1H3-215ENST00000461778 CFTRP13569 1480 aa21.81■■□□□ 1.08
NR1H3-215ENST00000461778 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
NR1H3-215ENST00000461778 MRC2Q9UBG0 1479 aa21.75■■□□□ 1.07
NR1H3-215ENST00000461778 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
NR1H3-215ENST00000461778 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
NR1H3-215ENST00000461778 WDR62O43379 1518 aa21.65■■□□□ 1.06
NR1H3-215ENST00000461778 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
NR1H3-215ENST00000461778 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
NR1H3-215ENST00000461778 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
NR1H3-215ENST00000461778 PRDM2Q13029 1718 aa21.48■■□□□ 1.03
NR1H3-215ENST00000461778 LOC105371045A0A1W2PR82 267 aa21.45■■□□□ 1.02
NR1H3-215ENST00000461778 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
NR1H3-215ENST00000461778 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
NR1H3-215ENST00000461778 BIVM-ERCC5R4GMW8 1640 aa21.36■■□□□ 1.01
NR1H3-215ENST00000461778 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
NR1H3-215ENST00000461778 EEA1Q15075 1411 aa21.33■■□□□ 1.01
NR1H3-215ENST00000461778 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1.01
NR1H3-215ENST00000461778 IFT140Q96RY7 1462 aa21.3■■□□□ 1
NR1H3-215ENST00000461778 OSCARQ8IYS5 282 aa21.29■■□□□ 1
NR1H3-215ENST00000461778 SOGA1O94964 1423 aa21.27■■□□□ 1
NR1H3-215ENST00000461778 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
NR1H3-215ENST00000461778 CUX1P39880 1505 aa21.24■□□□□ 0.99
NR1H3-215ENST00000461778 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
NR1H3-215ENST00000461778 RUSC2Q8N2Y8 1516 aa21.2■□□□□ 0.98
NR1H3-215ENST00000461778 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
NR1H3-215ENST00000461778 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
NR1H3-215ENST00000461778 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.979e-8■■■■□ 21.2
NR1H3-215ENST00000461778 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
NR1H3-215ENST00000461778 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
NR1H3-215ENST00000461778 KIF21BO75037 1637 aa21.04■□□□□ 0.96
NR1H3-215ENST00000461778 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
NR1H3-215ENST00000461778 FGD5Q6ZNL6 1462 aa21.04■□□□□ 0.96
NR1H3-215ENST00000461778 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
NR1H3-215ENST00000461778 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
NR1H3-215ENST00000461778 FBLN2P98095 1184 aa20.99■□□□□ 0.95
NR1H3-215ENST00000461778 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
NR1H3-215ENST00000461778 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
NR1H3-215ENST00000461778 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
NR1H3-215ENST00000461778 WDR97A6NE52 1622 aa20.9■□□□□ 0.94
NR1H3-215ENST00000461778 PRXQ9BXM0 1461 aa20.89■□□□□ 0.94
NR1H3-215ENST00000461778 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
NR1H3-215ENST00000461778 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
NR1H3-215ENST00000461778 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
NR1H3-215ENST00000461778 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
NR1H3-215ENST00000461778 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.93
NR1H3-215ENST00000461778 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.93
NR1H3-215ENST00000461778 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.93
NR1H3-215ENST00000461778 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
NR1H3-215ENST00000461778 MAGI1Q96QZ7 1491 aaPredicted RBP20.82■□□□□ 0.92
NR1H3-215ENST00000461778 CHD1O14646 1710 aa20.82■□□□□ 0.92
NR1H3-215ENST00000461778 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
NR1H3-215ENST00000461778 IGF1RP08069 1367 aa20.79■□□□□ 0.92
NR1H3-215ENST00000461778 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
NR1H3-215ENST00000461778 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
NR1H3-215ENST00000461778 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
NR1H3-215ENST00000461778 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
NR1H3-215ENST00000461778 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
NR1H3-215ENST00000461778 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms