RNA–Protein interactions for RNA: ENST00000461715.1

TMEM164-205, Transcript of transmembrane protein 164, humanhuman

TSL 3

Gene TMEM164, Length 711 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM164-205ENST00000461715 NISCHQ9Y2I1 1504 aa16.51■□□□□ 0.23
TMEM164-205ENST00000461715 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
TMEM164-205ENST00000461715 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
TMEM164-205ENST00000461715 ABCC9O60706 1549 aa14.19□□□□□ -0.14
TMEM164-205ENST00000461715 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
TMEM164-205ENST00000461715 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
TMEM164-205ENST00000461715 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
TMEM164-205ENST00000461715 NACADO15069 1562 aa13.71□□□□□ -0.21
TMEM164-205ENST00000461715 RB1CC1Q8TDY2 1594 aa13.68□□□□□ -0.22
TMEM164-205ENST00000461715 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
TMEM164-205ENST00000461715 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
TMEM164-205ENST00000461715 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMEM164-205ENST00000461715 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
TMEM164-205ENST00000461715 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
TMEM164-205ENST00000461715 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
TMEM164-205ENST00000461715 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
TMEM164-205ENST00000461715 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.3
TMEM164-205ENST00000461715 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
TMEM164-205ENST00000461715 CECR2Q9BXF3 1484 aa12.85□□□□□ -0.35
TMEM164-205ENST00000461715 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
TMEM164-205ENST00000461715 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
TMEM164-205ENST00000461715 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
TMEM164-205ENST00000461715 MROH2BQ7Z745 1585 aa12.71□□□□□ -0.37
TMEM164-205ENST00000461715 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
TMEM164-205ENST00000461715 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
TMEM164-205ENST00000461715 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
TMEM164-205ENST00000461715 RSF1Q96T23 1441 aaPredicted RBP12.65□□□□□ -0.38
TMEM164-205ENST00000461715 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
TMEM164-205ENST00000461715 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
TMEM164-205ENST00000461715 WIZO95785 1651 aa12.56□□□□□ -0.4
TMEM164-205ENST00000461715 HMGXB3Q12766 1538 aa12.56□□□□□ -0.4
TMEM164-205ENST00000461715 SUPT5HO00267 1087 aaKnown RBP12.51□□□□□ -0.41
TMEM164-205ENST00000461715 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
TMEM164-205ENST00000461715 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
TMEM164-205ENST00000461715 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
TMEM164-205ENST00000461715 CADPSQ9ULU8 1353 aa12.34□□□□□ -0.43
TMEM164-205ENST00000461715 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
TMEM164-205ENST00000461715 NESP48681 1621 aa12.29□□□□□ -0.44
TMEM164-205ENST00000461715 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
TMEM164-205ENST00000461715 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
TMEM164-205ENST00000461715 CFTRP13569 1480 aa12.26□□□□□ -0.45
TMEM164-205ENST00000461715 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
TMEM164-205ENST00000461715 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
TMEM164-205ENST00000461715 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.46
TMEM164-205ENST00000461715 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
TMEM164-205ENST00000461715 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
TMEM164-205ENST00000461715 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
TMEM164-205ENST00000461715 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
TMEM164-205ENST00000461715 CUX2O14529 1486 aa12.04□□□□□ -0.48
TMEM164-205ENST00000461715 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
TMEM164-205ENST00000461715 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
TMEM164-205ENST00000461715 WDR62O43379 1518 aa12□□□□□ -0.49
TMEM164-205ENST00000461715 URB2Q14146 1524 aaKnown RBP12□□□□□ -0.49
TMEM164-205ENST00000461715 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
TMEM164-205ENST00000461715 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
TMEM164-205ENST00000461715 WRNQ14191 1432 aaPredicted RBP eCLIP11.93□□□□□ -0.5
TMEM164-205ENST00000461715 CUX1P39880 1505 aa11.91□□□□□ -0.5
TMEM164-205ENST00000461715 SOGA1O94964 1423 aa11.9□□□□□ -0.5
TMEM164-205ENST00000461715 IFT140Q96RY7 1462 aa11.88□□□□□ -0.51
TMEM164-205ENST00000461715 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
TMEM164-205ENST00000461715 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
TMEM164-205ENST00000461715 RAD54L2Q9Y4B4 1467 aa11.84□□□□□ -0.51
TMEM164-205ENST00000461715 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
TMEM164-205ENST00000461715 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
TMEM164-205ENST00000461715 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
TMEM164-205ENST00000461715 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
TMEM164-205ENST00000461715 BIVM-ERCC5R4GMW8 1640 aa11.8□□□□□ -0.52
TMEM164-205ENST00000461715 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
TMEM164-205ENST00000461715 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
TMEM164-205ENST00000461715 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMEM164-205ENST00000461715 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
TMEM164-205ENST00000461715 GAPVD1Q14C86 1478 aa11.72□□□□□ -0.53
TMEM164-205ENST00000461715 WDR97A6NE52 1622 aa11.71□□□□□ -0.53
TMEM164-205ENST00000461715 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
TMEM164-205ENST00000461715 FBLN2P98095 1184 aa11.69□□□□□ -0.54
TMEM164-205ENST00000461715 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
TMEM164-205ENST00000461715 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
TMEM164-205ENST00000461715 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
TMEM164-205ENST00000461715 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
TMEM164-205ENST00000461715 IGF1RP08069 1367 aa11.65□□□□□ -0.55
TMEM164-205ENST00000461715 ABCA5Q8WWZ7 1642 aa11.64□□□□□ -0.55
TMEM164-205ENST00000461715 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
TMEM164-205ENST00000461715 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
TMEM164-205ENST00000461715 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
TMEM164-205ENST00000461715 SYNJ2O15056 1496 aa11.6□□□□□ -0.55
TMEM164-205ENST00000461715 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
TMEM164-205ENST00000461715 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
TMEM164-205ENST00000461715 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
TMEM164-205ENST00000461715 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
TMEM164-205ENST00000461715 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
TMEM164-205ENST00000461715 FAM9AQ8IZU1 332 aaPredicted RBP11.56□□□□□ -0.56
TMEM164-205ENST00000461715 EEA1Q15075 1411 aa11.54□□□□□ -0.56
TMEM164-205ENST00000461715 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
TMEM164-205ENST00000461715 ADAMTS12P58397 1594 aa11.51□□□□□ -0.57
TMEM164-205ENST00000461715 CHD1O14646 1710 aa11.51□□□□□ -0.57
TMEM164-205ENST00000461715 CUL7Q14999 1698 aa11.5□□□□□ -0.57
TMEM164-205ENST00000461715 RAPGEF2Q9Y4G8 1499 aa11.49□□□□□ -0.57
TMEM164-205ENST00000461715 NUP160Q12769 1436 aa11.47□□□□□ -0.57
TMEM164-205ENST00000461715 JPH4Q96JJ6 628 aa11.47□□□□□ -0.57
TMEM164-205ENST00000461715 PRXQ9BXM0 1461 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms