RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
NPHP1-209ENST00000461707 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.04
NPHP1-209ENST00000461707 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
NPHP1-209ENST00000461707 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
NPHP1-209ENST00000461707 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
NPHP1-209ENST00000461707 UNC13AQ9UPW8 1703 aa13.91□□□□□ -0.18
NPHP1-209ENST00000461707 ABCC9O60706 1549 aa13.9□□□□□ -0.18
NPHP1-209ENST00000461707 NACADO15069 1562 aa13.76□□□□□ -0.21
NPHP1-209ENST00000461707 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
NPHP1-209ENST00000461707 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
NPHP1-209ENST00000461707 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
NPHP1-209ENST00000461707 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
NPHP1-209ENST00000461707 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
NPHP1-209ENST00000461707 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
NPHP1-209ENST00000461707 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
NPHP1-209ENST00000461707 RSF1Q96T23 1441 aaPredicted RBP13.24□□□□□ -0.29
NPHP1-209ENST00000461707 SMARCA4P51532 1647 aa13.23□□□□□ -0.29
NPHP1-209ENST00000461707 WIZO95785 1651 aa13.17□□□□□ -0.3
NPHP1-209ENST00000461707 MROH2BQ7Z745 1585 aa13.17□□□□□ -0.3
NPHP1-209ENST00000461707 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
NPHP1-209ENST00000461707 TOP2AP11388 1531 aaKnown RBP13.1□□□□□ -0.31
NPHP1-209ENST00000461707 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
NPHP1-209ENST00000461707 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
NPHP1-209ENST00000461707 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
NPHP1-209ENST00000461707 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
NPHP1-209ENST00000461707 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
NPHP1-209ENST00000461707 BIVM-ERCC5R4GMW8 1640 aa12.85□□□□□ -0.35
NPHP1-209ENST00000461707 CHIC1Q5VXU3 224 aa12.72□□□□□ -0.37
NPHP1-209ENST00000461707 CCDC88BA6NC98 1476 aa12.71□□□□□ -0.37
NPHP1-209ENST00000461707 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
NPHP1-209ENST00000461707 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
NPHP1-209ENST00000461707 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
NPHP1-209ENST00000461707 KIF21BO75037 1637 aa12.61□□□□□ -0.39
NPHP1-209ENST00000461707 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
NPHP1-209ENST00000461707 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
NPHP1-209ENST00000461707 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
NPHP1-209ENST00000461707 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
NPHP1-209ENST00000461707 CFTRP13569 1480 aa12.41□□□□□ -0.42
NPHP1-209ENST00000461707 ERICH3Q5RHP9 1530 aa12.38□□□□□ -0.43
NPHP1-209ENST00000461707 CUX1P39880 1505 aa12.35□□□□□ -0.43
NPHP1-209ENST00000461707 EEA1Q15075 1411 aa12.33□□□□□ -0.44
NPHP1-209ENST00000461707 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
NPHP1-209ENST00000461707 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
NPHP1-209ENST00000461707 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
NPHP1-209ENST00000461707 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
NPHP1-209ENST00000461707 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
NPHP1-209ENST00000461707 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
NPHP1-209ENST00000461707 RUSC2Q8N2Y8 1516 aa12.22□□□□□ -0.45
NPHP1-209ENST00000461707 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
NPHP1-209ENST00000461707 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
NPHP1-209ENST00000461707 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
NPHP1-209ENST00000461707 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
NPHP1-209ENST00000461707 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
NPHP1-209ENST00000461707 DNMBPQ6XZF7 1577 aa12.15□□□□□ -0.47
NPHP1-209ENST00000461707 SOGA1O94964 1423 aa12.14□□□□□ -0.47
NPHP1-209ENST00000461707 CUL7Q14999 1698 aa12.12□□□□□ -0.47
NPHP1-209ENST00000461707 TNIKQ9UKE5 1360 aa12.12□□□□□ -0.47
NPHP1-209ENST00000461707 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
NPHP1-209ENST00000461707 SAMD9Q5K651 1589 aa12.11□□□□□ -0.47
NPHP1-209ENST00000461707 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
NPHP1-209ENST00000461707 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
NPHP1-209ENST00000461707 CUX2O14529 1486 aa12.06□□□□□ -0.48
NPHP1-209ENST00000461707 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
NPHP1-209ENST00000461707 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
NPHP1-209ENST00000461707 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
NPHP1-209ENST00000461707 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
NPHP1-209ENST00000461707 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
NPHP1-209ENST00000461707 ARAP1Q96P48 1450 aa12.04□□□□□ -0.48
NPHP1-209ENST00000461707 TRIM41Q8WV44 630 aa12□□□□□ -0.49
NPHP1-209ENST00000461707 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
NPHP1-209ENST00000461707 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
NPHP1-209ENST00000461707 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
NPHP1-209ENST00000461707 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
NPHP1-209ENST00000461707 WDR62O43379 1518 aa11.95□□□□□ -0.5
NPHP1-209ENST00000461707 ARHGEF11O15085 1522 aa11.95□□□□□ -0.5
NPHP1-209ENST00000461707 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
NPHP1-209ENST00000461707 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
NPHP1-209ENST00000461707 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
NPHP1-209ENST00000461707 HRCP23327 699 aa11.91□□□□□ -0.5
NPHP1-209ENST00000461707 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
NPHP1-209ENST00000461707 AQRO60306 1485 aaKnown RBP eCLIP11.89□□□□□ -0.51
NPHP1-209ENST00000461707 FGD5Q6ZNL6 1462 aa11.87□□□□□ -0.51
NPHP1-209ENST00000461707 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
NPHP1-209ENST00000461707 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
NPHP1-209ENST00000461707 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
NPHP1-209ENST00000461707 ARHGAP35Q9NRY4 1499 aa11.86□□□□□ -0.51
NPHP1-209ENST00000461707 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
NPHP1-209ENST00000461707 VPS8Q8N3P4 1428 aa11.85□□□□□ -0.51
NPHP1-209ENST00000461707 TIAM1Q13009 1591 aa11.84□□□□□ -0.51
NPHP1-209ENST00000461707 CLIP1P30622 1438 aa11.83□□□□□ -0.52
NPHP1-209ENST00000461707 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
NPHP1-209ENST00000461707 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
NPHP1-209ENST00000461707 ADCY10Q96PN6 1610 aa11.81□□□□□ -0.52
NPHP1-209ENST00000461707 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
NPHP1-209ENST00000461707 IGF1RP08069 1367 aa11.78□□□□□ -0.52
NPHP1-209ENST00000461707 SHROOM2Q13796 1616 aa11.74□□□□□ -0.53
NPHP1-209ENST00000461707 NESP48681 1621 aa11.74□□□□□ -0.53
NPHP1-209ENST00000461707 GCC2Q8IWJ2 1684 aa11.73□□□□□ -0.53
NPHP1-209ENST00000461707 TRIM26Q12899 539 aaPredicted RBP11.73□□□□□ -0.53
NPHP1-209ENST00000461707 CROCC2H7BZ55 1655 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms