RNA–Protein interactions for RNA: ENST00000461474.1

PLEKHA3-204, Transcript of pleckstrin homology domain containing A3, humanhuman

TSL 4

Gene PLEKHA3, Length 528 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHA3-204ENST00000461474 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
PLEKHA3-204ENST00000461474 NISCHQ9Y2I1 1504 aa25.92■■□□□ 1.74
PLEKHA3-204ENST00000461474 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
PLEKHA3-204ENST00000461474 CCDC180Q9P1Z9 1646 aa22.62■■□□□ 1.21
PLEKHA3-204ENST00000461474 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
PLEKHA3-204ENST00000461474 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
PLEKHA3-204ENST00000461474 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
PLEKHA3-204ENST00000461474 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
PLEKHA3-204ENST00000461474 ABCC9O60706 1549 aa21.39■■□□□ 1.01
PLEKHA3-204ENST00000461474 MYO15BQ96JP2 1530 aa21.3■■□□□ 1
PLEKHA3-204ENST00000461474 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
PLEKHA3-204ENST00000461474 NACADO15069 1562 aa21.11■□□□□ 0.97
PLEKHA3-204ENST00000461474 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
PLEKHA3-204ENST00000461474 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
PLEKHA3-204ENST00000461474 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
PLEKHA3-204ENST00000461474 FOXD1Q16676 465 aa20.53■□□□□ 0.88
PLEKHA3-204ENST00000461474 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
PLEKHA3-204ENST00000461474 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
PLEKHA3-204ENST00000461474 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.84
PLEKHA3-204ENST00000461474 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
PLEKHA3-204ENST00000461474 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
PLEKHA3-204ENST00000461474 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
PLEKHA3-204ENST00000461474 RSF1Q96T23 1441 aaPredicted RBP20.08■□□□□ 0.8
PLEKHA3-204ENST00000461474 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
PLEKHA3-204ENST00000461474 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
PLEKHA3-204ENST00000461474 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
PLEKHA3-204ENST00000461474 WIZO95785 1651 aa19.78■□□□□ 0.76
PLEKHA3-204ENST00000461474 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
PLEKHA3-204ENST00000461474 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
PLEKHA3-204ENST00000461474 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
PLEKHA3-204ENST00000461474 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
PLEKHA3-204ENST00000461474 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
PLEKHA3-204ENST00000461474 ADRA2BP18089 450 aa19.54■□□□□ 0.72
PLEKHA3-204ENST00000461474 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
PLEKHA3-204ENST00000461474 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
PLEKHA3-204ENST00000461474 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
PLEKHA3-204ENST00000461474 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
PLEKHA3-204ENST00000461474 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
PLEKHA3-204ENST00000461474 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
PLEKHA3-204ENST00000461474 CC2D2AQ9P2K1 1620 aa19.39■□□□□ 0.69
PLEKHA3-204ENST00000461474 MSH5O43196 834 aa19.15■□□□□ 0.66
PLEKHA3-204ENST00000461474 CFTRP13569 1480 aa19.04■□□□□ 0.64
PLEKHA3-204ENST00000461474 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
PLEKHA3-204ENST00000461474 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
PLEKHA3-204ENST00000461474 TRIM41Q8WV44 630 aa18.95■□□□□ 0.62
PLEKHA3-204ENST00000461474 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
PLEKHA3-204ENST00000461474 WRNQ14191 1432 aaPredicted RBP eCLIP18.86■□□□□ 0.61
PLEKHA3-204ENST00000461474 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
PLEKHA3-204ENST00000461474 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
PLEKHA3-204ENST00000461474 NESP48681 1621 aa18.77■□□□□ 0.6
PLEKHA3-204ENST00000461474 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
PLEKHA3-204ENST00000461474 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
PLEKHA3-204ENST00000461474 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
PLEKHA3-204ENST00000461474 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.58
PLEKHA3-204ENST00000461474 CUX1P39880 1505 aa18.7■□□□□ 0.58
PLEKHA3-204ENST00000461474 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
PLEKHA3-204ENST00000461474 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
PLEKHA3-204ENST00000461474 SOGA1O94964 1423 aa18.58■□□□□ 0.57
PLEKHA3-204ENST00000461474 EEA1Q15075 1411 aa18.58■□□□□ 0.57
PLEKHA3-204ENST00000461474 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
PLEKHA3-204ENST00000461474 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
PLEKHA3-204ENST00000461474 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
PLEKHA3-204ENST00000461474 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
PLEKHA3-204ENST00000461474 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
PLEKHA3-204ENST00000461474 LOC105371045A0A1W2PR82 267 aa18.51■□□□□ 0.55
PLEKHA3-204ENST00000461474 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
PLEKHA3-204ENST00000461474 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
PLEKHA3-204ENST00000461474 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
PLEKHA3-204ENST00000461474 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
PLEKHA3-204ENST00000461474 MRC2Q9UBG0 1479 aa18.43■□□□□ 0.54
PLEKHA3-204ENST00000461474 KIF27Q86VH2 1401 aa18.39■□□□□ 0.53
PLEKHA3-204ENST00000461474 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
PLEKHA3-204ENST00000461474 WDR62O43379 1518 aa18.35■□□□□ 0.53
PLEKHA3-204ENST00000461474 CUX2O14529 1486 aa18.34■□□□□ 0.53
PLEKHA3-204ENST00000461474 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
PLEKHA3-204ENST00000461474 KIF21BO75037 1637 aa18.32■□□□□ 0.52
PLEKHA3-204ENST00000461474 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
PLEKHA3-204ENST00000461474 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
PLEKHA3-204ENST00000461474 IGF1RP08069 1367 aa18.3■□□□□ 0.52
PLEKHA3-204ENST00000461474 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
PLEKHA3-204ENST00000461474 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
PLEKHA3-204ENST00000461474 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
PLEKHA3-204ENST00000461474 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
PLEKHA3-204ENST00000461474 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
PLEKHA3-204ENST00000461474 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
PLEKHA3-204ENST00000461474 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
PLEKHA3-204ENST00000461474 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
PLEKHA3-204ENST00000461474 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
PLEKHA3-204ENST00000461474 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
PLEKHA3-204ENST00000461474 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
PLEKHA3-204ENST00000461474 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
PLEKHA3-204ENST00000461474 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
PLEKHA3-204ENST00000461474 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
PLEKHA3-204ENST00000461474 CUL7Q14999 1698 aa18.09■□□□□ 0.49
PLEKHA3-204ENST00000461474 CEP162Q5TB80 1403 aa18.08■□□□□ 0.49
PLEKHA3-204ENST00000461474 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
PLEKHA3-204ENST00000461474 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.484e-6■□□□□ 10.8
PLEKHA3-204ENST00000461474 GRIN2BQ13224 1484 aa18.04■□□□□ 0.48
PLEKHA3-204ENST00000461474 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
PLEKHA3-204ENST00000461474 PBRM1Q86U86 1689 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms