RNA–Protein interactions for RNA: ENST00000461015.1

NICN1-205, Transcript of nicolin 1, humanhuman

TSL 4

Gene NICN1, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-205ENST00000461015 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
NICN1-205ENST00000461015 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
NICN1-205ENST00000461015 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
NICN1-205ENST00000461015 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
NICN1-205ENST00000461015 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
NICN1-205ENST00000461015 ABCC9O60706 1549 aa14.87□□□□□ -0.03
NICN1-205ENST00000461015 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
NICN1-205ENST00000461015 NACADO15069 1562 aa14.72□□□□□ -0.05
NICN1-205ENST00000461015 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
NICN1-205ENST00000461015 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
NICN1-205ENST00000461015 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
NICN1-205ENST00000461015 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
NICN1-205ENST00000461015 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
NICN1-205ENST00000461015 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
NICN1-205ENST00000461015 UNC13AQ9UPW8 1703 aa14□□□□□ -0.17
NICN1-205ENST00000461015 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
NICN1-205ENST00000461015 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
NICN1-205ENST00000461015 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
NICN1-205ENST00000461015 MROH2BQ7Z745 1585 aa13.87□□□□□ -0.19
NICN1-205ENST00000461015 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
NICN1-205ENST00000461015 WIZO95785 1651 aa13.69□□□□□ -0.22
NICN1-205ENST00000461015 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
NICN1-205ENST00000461015 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
NICN1-205ENST00000461015 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
NICN1-205ENST00000461015 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
NICN1-205ENST00000461015 CHIC1Q5VXU3 224 aa13.63□□□□□ -0.23
NICN1-205ENST00000461015 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
NICN1-205ENST00000461015 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
NICN1-205ENST00000461015 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
NICN1-205ENST00000461015 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
NICN1-205ENST00000461015 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
NICN1-205ENST00000461015 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
NICN1-205ENST00000461015 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
NICN1-205ENST00000461015 CADPSQ9ULU8 1353 aa13.3□□□□□ -0.28
NICN1-205ENST00000461015 CFTRP13569 1480 aa13.27□□□□□ -0.29
NICN1-205ENST00000461015 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
NICN1-205ENST00000461015 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
NICN1-205ENST00000461015 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
NICN1-205ENST00000461015 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
NICN1-205ENST00000461015 EEA1Q15075 1411 aa13.13□□□□□ -0.31
NICN1-205ENST00000461015 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
NICN1-205ENST00000461015 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
NICN1-205ENST00000461015 LOC105371045A0A1W2PR82 267 aa13.09□□□□□ -0.31
NICN1-205ENST00000461015 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
NICN1-205ENST00000461015 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
NICN1-205ENST00000461015 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
NICN1-205ENST00000461015 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
NICN1-205ENST00000461015 NESP48681 1621 aa12.99□□□□□ -0.33
NICN1-205ENST00000461015 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
NICN1-205ENST00000461015 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
NICN1-205ENST00000461015 SOGA1O94964 1423 aa12.97□□□□□ -0.33
NICN1-205ENST00000461015 CUX1P39880 1505 aa12.97□□□□□ -0.33
NICN1-205ENST00000461015 KIF27Q86VH2 1401 aa12.96□□□□□ -0.34
NICN1-205ENST00000461015 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
NICN1-205ENST00000461015 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
NICN1-205ENST00000461015 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.35
NICN1-205ENST00000461015 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
NICN1-205ENST00000461015 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
NICN1-205ENST00000461015 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
NICN1-205ENST00000461015 RUSC2Q8N2Y8 1516 aa12.87□□□□□ -0.35
NICN1-205ENST00000461015 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
NICN1-205ENST00000461015 TNIKQ9UKE5 1360 aa12.86□□□□□ -0.35
NICN1-205ENST00000461015 CUX2O14529 1486 aa12.85□□□□□ -0.35
NICN1-205ENST00000461015 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
NICN1-205ENST00000461015 MRC2Q9UBG0 1479 aa12.84□□□□□ -0.35
NICN1-205ENST00000461015 IGF1RP08069 1367 aa12.83□□□□□ -0.36
NICN1-205ENST00000461015 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
NICN1-205ENST00000461015 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
NICN1-205ENST00000461015 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
NICN1-205ENST00000461015 CARMIL1Q5VZK9 1371 aa12.79□□□□□ -0.36
NICN1-205ENST00000461015 PRXQ9BXM0 1461 aa12.77□□□□□ -0.37
NICN1-205ENST00000461015 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.37
NICN1-205ENST00000461015 KIF21BO75037 1637 aa12.76□□□□□ -0.37
NICN1-205ENST00000461015 KIF21AQ7Z4S6 1674 aa12.74□□□□□ -0.37
NICN1-205ENST00000461015 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
NICN1-205ENST00000461015 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
NICN1-205ENST00000461015 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
NICN1-205ENST00000461015 RAPGEF2Q9Y4G8 1499 aa12.72□□□□□ -0.37
NICN1-205ENST00000461015 GAPVD1Q14C86 1478 aa12.71□□□□□ -0.38
NICN1-205ENST00000461015 WDR62O43379 1518 aa12.7□□□□□ -0.38
NICN1-205ENST00000461015 CEP162Q5TB80 1403 aa12.7□□□□□ -0.38
NICN1-205ENST00000461015 APLP2Q06481 763 aa12.67□□□□□ -0.38
NICN1-205ENST00000461015 CLIP1P30622 1438 aa12.65□□□□□ -0.38
NICN1-205ENST00000461015 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
NICN1-205ENST00000461015 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
NICN1-205ENST00000461015 RANGAP1P46060 587 aaPredicted RBP12.62□□□□□ -0.39
NICN1-205ENST00000461015 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
NICN1-205ENST00000461015 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.393e-7■■■□□ 17
NICN1-205ENST00000461015 TRIM26Q12899 539 aaPredicted RBP12.61□□□□□ -0.39
NICN1-205ENST00000461015 FHAD1B1AJZ9 1412 aa12.61□□□□□ -0.39
NICN1-205ENST00000461015 CUL7Q14999 1698 aa12.61□□□□□ -0.39
NICN1-205ENST00000461015 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
NICN1-205ENST00000461015 ABCA5Q8WWZ7 1642 aa12.57□□□□□ -0.4
NICN1-205ENST00000461015 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
NICN1-205ENST00000461015 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.4
NICN1-205ENST00000461015 VPS8Q8N3P4 1428 aa12.52□□□□□ -0.41
NICN1-205ENST00000461015 FBLN2P98095 1184 aa12.51□□□□□ -0.41
NICN1-205ENST00000461015 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
NICN1-205ENST00000461015 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
NICN1-205ENST00000461015 SYNJ2O15056 1496 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms