RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 NISCHQ9Y2I1 1504 aa14.05□□□□□ -0.16
NXF3-203ENST00000460791 CCDC180Q9P1Z9 1646 aa12.42□□□□□ -0.42
NXF3-203ENST00000460791 ABCC9O60706 1549 aa12.18□□□□□ -0.46
NXF3-203ENST00000460791 CHIC1Q5VXU3 224 aa11.99□□□□□ -0.49
NXF3-203ENST00000460791 AEBP2Q6ZN18 517 aaPredicted RBP11.93□□□□□ -0.5
NXF3-203ENST00000460791 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
NXF3-203ENST00000460791 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
NXF3-203ENST00000460791 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
NXF3-203ENST00000460791 NACADO15069 1562 aa11.66□□□□□ -0.54
NXF3-203ENST00000460791 MYO15BQ96JP2 1530 aa11.54□□□□□ -0.56
NXF3-203ENST00000460791 DCAF1Q9Y4B6 1507 aa11.54□□□□□ -0.56
NXF3-203ENST00000460791 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.57
NXF3-203ENST00000460791 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
NXF3-203ENST00000460791 SCRIBQ14160 1630 aa11.43□□□□□ -0.58
NXF3-203ENST00000460791 BICRAQ9NZM4 1560 aa11.34□□□□□ -0.59
NXF3-203ENST00000460791 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
NXF3-203ENST00000460791 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.62
NXF3-203ENST00000460791 EIF4G1Q04637 1599 aaKnown RBP11.02□□□□□ -0.65
NXF3-203ENST00000460791 CC2D2AQ9P2K1 1620 aa10.99□□□□□ -0.65
NXF3-203ENST00000460791 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
NXF3-203ENST00000460791 SMARCA4P51532 1647 aa10.89□□□□□ -0.67
NXF3-203ENST00000460791 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
NXF3-203ENST00000460791 BAZ1AQ9NRL2 1556 aaPredicted RBP10.85□□□□□ -0.67
NXF3-203ENST00000460791 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
NXF3-203ENST00000460791 WIZO95785 1651 aa10.79□□□□□ -0.68
NXF3-203ENST00000460791 SMARCA2P51531 1590 aa10.77□□□□□ -0.68
NXF3-203ENST00000460791 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
NXF3-203ENST00000460791 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
NXF3-203ENST00000460791 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
NXF3-203ENST00000460791 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.69
NXF3-203ENST00000460791 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
NXF3-203ENST00000460791 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
NXF3-203ENST00000460791 TOP2AP11388 1531 aaKnown RBP10.59□□□□□ -0.71
NXF3-203ENST00000460791 NESP48681 1621 aa10.57□□□□□ -0.72
NXF3-203ENST00000460791 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
NXF3-203ENST00000460791 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
NXF3-203ENST00000460791 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
NXF3-203ENST00000460791 ERCC6Q03468 1493 aa10.46□□□□□ -0.74
NXF3-203ENST00000460791 LAMC3Q9Y6N6 1575 aa10.46□□□□□ -0.74
NXF3-203ENST00000460791 KIF21AQ7Z4S6 1674 aa10.45□□□□□ -0.74
NXF3-203ENST00000460791 CFTRP13569 1480 aa10.41□□□□□ -0.74
NXF3-203ENST00000460791 PRDM2Q13029 1718 aa10.4□□□□□ -0.74
NXF3-203ENST00000460791 PDS5BQ9NTI5 1447 aa10.4□□□□□ -0.75
NXF3-203ENST00000460791 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
NXF3-203ENST00000460791 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
NXF3-203ENST00000460791 THOC2Q8NI27 1593 aaKnown RBP10.32□□□□□ -0.76
NXF3-203ENST00000460791 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
NXF3-203ENST00000460791 URB2Q14146 1524 aaKnown RBP10.27□□□□□ -0.77
NXF3-203ENST00000460791 CUX2O14529 1486 aa10.24□□□□□ -0.77
NXF3-203ENST00000460791 WDR62O43379 1518 aa10.23□□□□□ -0.77
NXF3-203ENST00000460791 SENP3Q9H4L4 574 aaPredicted RBP10.22□□□□□ -0.77
NXF3-203ENST00000460791 TOPBP1Q92547 1522 aa10.22□□□□□ -0.77
NXF3-203ENST00000460791 ABCC8Q09428 1581 aa10.19□□□□□ -0.78
NXF3-203ENST00000460791 DNMBPQ6XZF7 1577 aa10.18□□□□□ -0.78
NXF3-203ENST00000460791 CUX1P39880 1505 aa10.18□□□□□ -0.78
NXF3-203ENST00000460791 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
NXF3-203ENST00000460791 POLA1P09884 1462 aaPredicted RBP10.12□□□□□ -0.79
NXF3-203ENST00000460791 FGD5Q6ZNL6 1462 aa10.12□□□□□ -0.79
NXF3-203ENST00000460791 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
NXF3-203ENST00000460791 SYNJ1O43426 1573 aa10.12□□□□□ -0.79
NXF3-203ENST00000460791 SOGA1O94964 1423 aa10.11□□□□□ -0.79
NXF3-203ENST00000460791 ZNF608Q9ULD9 1512 aaPredicted RBP10.11□□□□□ -0.79
NXF3-203ENST00000460791 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
NXF3-203ENST00000460791 TARBP1Q13395 1621 aaKnown RBP10.09□□□□□ -0.79
NXF3-203ENST00000460791 TOP2BQ02880 1626 aa10.08□□□□□ -0.8
NXF3-203ENST00000460791 BIVM-ERCC5R4GMW8 1640 aa10.08□□□□□ -0.8
NXF3-203ENST00000460791 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.8
NXF3-203ENST00000460791 TDRD9Q8NDG6 1382 aaKnown RBP10.07□□□□□ -0.8
NXF3-203ENST00000460791 EIF4G3O43432 1585 aaKnown RBP10.03□□□□□ -0.8
NXF3-203ENST00000460791 WDR97A6NE52 1622 aa10.02□□□□□ -0.81
NXF3-203ENST00000460791 TRIM41Q8WV44 630 aa10.01□□□□□ -0.81
NXF3-203ENST00000460791 ABCA10Q8WWZ4 1543 aa10□□□□□ -0.81
NXF3-203ENST00000460791 FBLN2P98095 1184 aa9.99□□□□□ -0.81
NXF3-203ENST00000460791 PBRM1Q86U86 1689 aa9.98□□□□□ -0.81
NXF3-203ENST00000460791 GAPVD1Q14C86 1478 aa9.98□□□□□ -0.81
NXF3-203ENST00000460791 CHD1O14646 1710 aa9.96□□□□□ -0.81
NXF3-203ENST00000460791 ABCA5Q8WWZ7 1642 aa9.96□□□□□ -0.82
NXF3-203ENST00000460791 GRIN2BQ13224 1484 aa9.95□□□□□ -0.82
NXF3-203ENST00000460791 SNAPC4Q5SXM2 1469 aa9.95□□□□□ -0.82
NXF3-203ENST00000460791 RUSC2Q8N2Y8 1516 aa9.92□□□□□ -0.82
NXF3-203ENST00000460791 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
NXF3-203ENST00000460791 CHMP7Q8WUX9 453 aaPredicted RBP9.92□□□□□ -0.82
NXF3-203ENST00000460791 DNAJC5Q9H3Z4 198 aa9.92□□□□□ -0.82
NXF3-203ENST00000460791 PLPPR3Q6T4P5 718 aa9.9□□□□□ -0.82
NXF3-203ENST00000460791 KIF27Q86VH2 1401 aa9.9□□□□□ -0.83
NXF3-203ENST00000460791 FAM9AQ8IZU1 332 aaPredicted RBP9.89□□□□□ -0.83
NXF3-203ENST00000460791 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
NXF3-203ENST00000460791 IGF1RP08069 1367 aa9.88□□□□□ -0.83
NXF3-203ENST00000460791 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
NXF3-203ENST00000460791 SYNJ2O15056 1496 aa9.86□□□□□ -0.83
NXF3-203ENST00000460791 ADAMTS12P58397 1594 aa9.86□□□□□ -0.83
NXF3-203ENST00000460791 FHAD1B1AJZ9 1412 aa9.84□□□□□ -0.83
NXF3-203ENST00000460791 CARMIL1Q5VZK9 1371 aa9.83□□□□□ -0.84
NXF3-203ENST00000460791 EHMT2Q96KQ7 1210 aa9.82□□□□□ -0.84
NXF3-203ENST00000460791 GRIN2AQ12879 1464 aa9.82□□□□□ -0.84
NXF3-203ENST00000460791 CUL7Q14999 1698 aa9.8□□□□□ -0.84
NXF3-203ENST00000460791 CEP170Q5SW79 1584 aa9.8□□□□□ -0.84
NXF3-203ENST00000460791 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
NXF3-203ENST00000460791 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.85
NXF3-203ENST00000460791 RIMBP3CA6NJZ7 1639 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms