RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 NISCHQ9Y2I1 1504 aa36.35■■■■□ 3.41
PCYT1A-212ENST00000460677 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
PCYT1A-212ENST00000460677 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
PCYT1A-212ENST00000460677 ABCC9O60706 1549 aa30.2■■■□□ 2.42
PCYT1A-212ENST00000460677 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
PCYT1A-212ENST00000460677 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
PCYT1A-212ENST00000460677 MYO15BQ96JP2 1530 aa29.82■■■□□ 2.36
PCYT1A-212ENST00000460677 NACADO15069 1562 aa29.67■■■□□ 2.34
PCYT1A-212ENST00000460677 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
PCYT1A-212ENST00000460677 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
PCYT1A-212ENST00000460677 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
PCYT1A-212ENST00000460677 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
PCYT1A-212ENST00000460677 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
PCYT1A-212ENST00000460677 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.14
PCYT1A-212ENST00000460677 SUPT5HO00267 1087 aaKnown RBP28.24■■■□□ 2.11
PCYT1A-212ENST00000460677 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
PCYT1A-212ENST00000460677 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
PCYT1A-212ENST00000460677 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
PCYT1A-212ENST00000460677 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
PCYT1A-212ENST00000460677 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
PCYT1A-212ENST00000460677 WIZO95785 1651 aa27.8■■■□□ 2.04
PCYT1A-212ENST00000460677 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.02
PCYT1A-212ENST00000460677 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
PCYT1A-212ENST00000460677 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
PCYT1A-212ENST00000460677 SMARCA2P51531 1590 aa27.56■■■□□ 2
PCYT1A-212ENST00000460677 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
PCYT1A-212ENST00000460677 BAZ1BQ9UIG0 1483 aaKnown RBP27.4■■□□□ 1.98
PCYT1A-212ENST00000460677 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
PCYT1A-212ENST00000460677 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
PCYT1A-212ENST00000460677 HMGXB3Q12766 1538 aa27.33■■□□□ 1.97
PCYT1A-212ENST00000460677 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
PCYT1A-212ENST00000460677 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
PCYT1A-212ENST00000460677 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
PCYT1A-212ENST00000460677 CFTRP13569 1480 aa26.72■■□□□ 1.87
PCYT1A-212ENST00000460677 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
PCYT1A-212ENST00000460677 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
PCYT1A-212ENST00000460677 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
PCYT1A-212ENST00000460677 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
PCYT1A-212ENST00000460677 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
PCYT1A-212ENST00000460677 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
PCYT1A-212ENST00000460677 NESP48681 1621 aa26.45■■□□□ 1.82
PCYT1A-212ENST00000460677 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
PCYT1A-212ENST00000460677 SYNJ1O43426 1573 aa26.35■■□□□ 1.81
PCYT1A-212ENST00000460677 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
PCYT1A-212ENST00000460677 PDS5BQ9NTI5 1447 aa26.28■■□□□ 1.8
PCYT1A-212ENST00000460677 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.8
PCYT1A-212ENST00000460677 CUX1P39880 1505 aa26.25■■□□□ 1.79
PCYT1A-212ENST00000460677 CEP164Q9UPV0 1460 aa26.21■■□□□ 1.79
PCYT1A-212ENST00000460677 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
PCYT1A-212ENST00000460677 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
PCYT1A-212ENST00000460677 FAM9AQ8IZU1 332 aaPredicted RBP26.07■■□□□ 1.76
PCYT1A-212ENST00000460677 SOGA1O94964 1423 aa26.06■■□□□ 1.76
PCYT1A-212ENST00000460677 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
PCYT1A-212ENST00000460677 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
PCYT1A-212ENST00000460677 EEA1Q15075 1411 aa26.03■■□□□ 1.76
PCYT1A-212ENST00000460677 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
PCYT1A-212ENST00000460677 RUSC2Q8N2Y8 1516 aa25.96■■□□□ 1.75
PCYT1A-212ENST00000460677 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.75
PCYT1A-212ENST00000460677 ERCC6Q03468 1493 aa25.93■■□□□ 1.74
PCYT1A-212ENST00000460677 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
PCYT1A-212ENST00000460677 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
PCYT1A-212ENST00000460677 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
PCYT1A-212ENST00000460677 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
PCYT1A-212ENST00000460677 WDR62O43379 1518 aa25.82■■□□□ 1.72
PCYT1A-212ENST00000460677 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
PCYT1A-212ENST00000460677 CUX2O14529 1486 aa25.79■■□□□ 1.72
PCYT1A-212ENST00000460677 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
PCYT1A-212ENST00000460677 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
PCYT1A-212ENST00000460677 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
PCYT1A-212ENST00000460677 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
PCYT1A-212ENST00000460677 KIF21BO75037 1637 aa25.67■■□□□ 1.7
PCYT1A-212ENST00000460677 TARBP1Q13395 1621 aaKnown RBP25.67■■□□□ 1.7
PCYT1A-212ENST00000460677 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
PCYT1A-212ENST00000460677 IGF1RP08069 1367 aa25.62■■□□□ 1.69
PCYT1A-212ENST00000460677 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
PCYT1A-212ENST00000460677 PRXQ9BXM0 1461 aa25.61■■□□□ 1.69
PCYT1A-212ENST00000460677 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
PCYT1A-212ENST00000460677 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
PCYT1A-212ENST00000460677 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
PCYT1A-212ENST00000460677 GAPVD1Q14C86 1478 aa25.54■■□□□ 1.68
PCYT1A-212ENST00000460677 RAPGEF2Q9Y4G8 1499 aa25.54■■□□□ 1.68
PCYT1A-212ENST00000460677 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
PCYT1A-212ENST00000460677 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
PCYT1A-212ENST00000460677 CARMIL1Q5VZK9 1371 aa25.49■■□□□ 1.67
PCYT1A-212ENST00000460677 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
PCYT1A-212ENST00000460677 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.662e-6■□□□□ 11.3
PCYT1A-212ENST00000460677 CUL7Q14999 1698 aa25.44■■□□□ 1.66
PCYT1A-212ENST00000460677 PBRM1Q86U86 1689 aa25.39■■□□□ 1.65
PCYT1A-212ENST00000460677 GRIN2BQ13224 1484 aa25.38■■□□□ 1.65
PCYT1A-212ENST00000460677 EIF4G3O43432 1585 aaKnown RBP25.36■■□□□ 1.65
PCYT1A-212ENST00000460677 CEP162Q5TB80 1403 aa25.35■■□□□ 1.65
PCYT1A-212ENST00000460677 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
PCYT1A-212ENST00000460677 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
PCYT1A-212ENST00000460677 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
PCYT1A-212ENST00000460677 CLIP1P30622 1438 aa25.21■■□□□ 1.63
PCYT1A-212ENST00000460677 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
PCYT1A-212ENST00000460677 CTTNBP2Q8WZ74 1663 aa25.11■■□□□ 1.61
PCYT1A-212ENST00000460677 RANGAP1P46060 587 aaPredicted RBP25.1■■□□□ 1.61
PCYT1A-212ENST00000460677 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
PCYT1A-212ENST00000460677 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms