RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
UPK1B-202ENST00000460625 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
UPK1B-202ENST00000460625 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
UPK1B-202ENST00000460625 ABCC9O60706 1549 aa20.87■□□□□ 0.93
UPK1B-202ENST00000460625 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
UPK1B-202ENST00000460625 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
UPK1B-202ENST00000460625 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
UPK1B-202ENST00000460625 NACADO15069 1562 aa20.4■□□□□ 0.86
UPK1B-202ENST00000460625 SHROOM4Q9ULL8 1493 aa20.39■□□□□ 0.86
UPK1B-202ENST00000460625 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
UPK1B-202ENST00000460625 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
UPK1B-202ENST00000460625 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
UPK1B-202ENST00000460625 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
UPK1B-202ENST00000460625 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
UPK1B-202ENST00000460625 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
UPK1B-202ENST00000460625 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.71
UPK1B-202ENST00000460625 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
UPK1B-202ENST00000460625 MROH2BQ7Z745 1585 aa19.38■□□□□ 0.69
UPK1B-202ENST00000460625 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.68
UPK1B-202ENST00000460625 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
UPK1B-202ENST00000460625 WIZO95785 1651 aa19.22■□□□□ 0.67
UPK1B-202ENST00000460625 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
UPK1B-202ENST00000460625 PEG3Q9GZU2 1588 aa19.04■□□□□ 0.64
UPK1B-202ENST00000460625 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
UPK1B-202ENST00000460625 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
UPK1B-202ENST00000460625 SMARCA2P51531 1590 aa18.95■□□□□ 0.62
UPK1B-202ENST00000460625 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
UPK1B-202ENST00000460625 CC2D2AQ9P2K1 1620 aa18.87■□□□□ 0.61
UPK1B-202ENST00000460625 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
UPK1B-202ENST00000460625 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
UPK1B-202ENST00000460625 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
UPK1B-202ENST00000460625 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
UPK1B-202ENST00000460625 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
UPK1B-202ENST00000460625 CFTRP13569 1480 aa18.4■□□□□ 0.54
UPK1B-202ENST00000460625 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
UPK1B-202ENST00000460625 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
UPK1B-202ENST00000460625 TRIM41Q8WV44 630 aa18.33■□□□□ 0.53
UPK1B-202ENST00000460625 NESP48681 1621 aa18.3■□□□□ 0.52
UPK1B-202ENST00000460625 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
UPK1B-202ENST00000460625 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
UPK1B-202ENST00000460625 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
UPK1B-202ENST00000460625 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
UPK1B-202ENST00000460625 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
UPK1B-202ENST00000460625 CUX1P39880 1505 aa18.12■□□□□ 0.49
UPK1B-202ENST00000460625 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
UPK1B-202ENST00000460625 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
UPK1B-202ENST00000460625 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
UPK1B-202ENST00000460625 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
UPK1B-202ENST00000460625 FAM9AQ8IZU1 332 aaPredicted RBP18.05■□□□□ 0.48
UPK1B-202ENST00000460625 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
UPK1B-202ENST00000460625 SOGA1O94964 1423 aa18.01■□□□□ 0.47
UPK1B-202ENST00000460625 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
UPK1B-202ENST00000460625 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
UPK1B-202ENST00000460625 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
UPK1B-202ENST00000460625 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
UPK1B-202ENST00000460625 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
UPK1B-202ENST00000460625 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
UPK1B-202ENST00000460625 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
UPK1B-202ENST00000460625 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
UPK1B-202ENST00000460625 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
UPK1B-202ENST00000460625 EEA1Q15075 1411 aa17.85■□□□□ 0.45
UPK1B-202ENST00000460625 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
UPK1B-202ENST00000460625 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.45
UPK1B-202ENST00000460625 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
UPK1B-202ENST00000460625 WDR62O43379 1518 aa17.79■□□□□ 0.44
UPK1B-202ENST00000460625 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
UPK1B-202ENST00000460625 CUX2O14529 1486 aa17.78■□□□□ 0.44
UPK1B-202ENST00000460625 KIF27Q86VH2 1401 aa17.77■□□□□ 0.43
UPK1B-202ENST00000460625 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
UPK1B-202ENST00000460625 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
UPK1B-202ENST00000460625 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.43
UPK1B-202ENST00000460625 KIF21BO75037 1637 aa17.67■□□□□ 0.42
UPK1B-202ENST00000460625 IGF1RP08069 1367 aa17.66■□□□□ 0.42
UPK1B-202ENST00000460625 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
UPK1B-202ENST00000460625 GOLGA3Q08378 1498 aa17.64■□□□□ 0.41
UPK1B-202ENST00000460625 PRXQ9BXM0 1461 aa17.64■□□□□ 0.41
UPK1B-202ENST00000460625 RAPGEF2Q9Y4G8 1499 aa17.64■□□□□ 0.41
UPK1B-202ENST00000460625 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
UPK1B-202ENST00000460625 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
UPK1B-202ENST00000460625 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
UPK1B-202ENST00000460625 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
UPK1B-202ENST00000460625 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
UPK1B-202ENST00000460625 AQRO60306 1485 aaKnown RBP eCLIP17.58■□□□□ 0.4
UPK1B-202ENST00000460625 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
UPK1B-202ENST00000460625 CARMIL1Q5VZK9 1371 aa17.55■□□□□ 0.4
UPK1B-202ENST00000460625 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
UPK1B-202ENST00000460625 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
UPK1B-202ENST00000460625 CUL7Q14999 1698 aa17.5■□□□□ 0.39
UPK1B-202ENST00000460625 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
UPK1B-202ENST00000460625 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
UPK1B-202ENST00000460625 GRIN2BQ13224 1484 aa17.46■□□□□ 0.39
UPK1B-202ENST00000460625 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
UPK1B-202ENST00000460625 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
UPK1B-202ENST00000460625 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
UPK1B-202ENST00000460625 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
UPK1B-202ENST00000460625 CLIP1P30622 1438 aa17.36■□□□□ 0.37
UPK1B-202ENST00000460625 MAGI1Q96QZ7 1491 aaPredicted RBP17.32■□□□□ 0.36
UPK1B-202ENST00000460625 CTTNBP2Q8WZ74 1663 aa17.31■□□□□ 0.36
UPK1B-202ENST00000460625 SYNJ2O15056 1496 aa17.27■□□□□ 0.35
UPK1B-202ENST00000460625 GRIN2AQ12879 1464 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms