RNA–Protein interactions for RNA: ENST00000460387.6

GCSAM-202, Transcript of germinal center associated signaling and motility, humanhuman

TSL 3 BASIC

Gene GCSAM, Length 623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSAM-202ENST00000460387 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
GCSAM-202ENST00000460387 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
GCSAM-202ENST00000460387 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
GCSAM-202ENST00000460387 NISCHQ9Y2I1 1504 aa20.79■□□□□ 0.92
GCSAM-202ENST00000460387 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
GCSAM-202ENST00000460387 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
GCSAM-202ENST00000460387 FOXD1Q16676 465 aa19.9■□□□□ 0.78
GCSAM-202ENST00000460387 ABCC9O60706 1549 aa19.41■□□□□ 0.7
GCSAM-202ENST00000460387 MSH5O43196 834 aa19.02■□□□□ 0.64
GCSAM-202ENST00000460387 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
GCSAM-202ENST00000460387 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
GCSAM-202ENST00000460387 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
GCSAM-202ENST00000460387 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
GCSAM-202ENST00000460387 NACADO15069 1562 aa18.02■□□□□ 0.48
GCSAM-202ENST00000460387 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
GCSAM-202ENST00000460387 DCAF8L2P0C7V8 631 aa17.97■□□□□ 0.47
GCSAM-202ENST00000460387 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
GCSAM-202ENST00000460387 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
GCSAM-202ENST00000460387 ADRA2BP18089 450 aa17.64■□□□□ 0.41
GCSAM-202ENST00000460387 BICRAQ9NZM4 1560 aa17.63■□□□□ 0.41
GCSAM-202ENST00000460387 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.4
GCSAM-202ENST00000460387 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
GCSAM-202ENST00000460387 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
GCSAM-202ENST00000460387 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
GCSAM-202ENST00000460387 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
GCSAM-202ENST00000460387 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
GCSAM-202ENST00000460387 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
GCSAM-202ENST00000460387 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
GCSAM-202ENST00000460387 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
GCSAM-202ENST00000460387 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
GCSAM-202ENST00000460387 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
GCSAM-202ENST00000460387 CUX2O14529 1486 aa16.99■□□□□ 0.31
GCSAM-202ENST00000460387 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
GCSAM-202ENST00000460387 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
GCSAM-202ENST00000460387 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
GCSAM-202ENST00000460387 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
GCSAM-202ENST00000460387 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
GCSAM-202ENST00000460387 NESP48681 1621 aa16.48■□□□□ 0.23
GCSAM-202ENST00000460387 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
GCSAM-202ENST00000460387 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
GCSAM-202ENST00000460387 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
GCSAM-202ENST00000460387 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
GCSAM-202ENST00000460387 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
GCSAM-202ENST00000460387 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
GCSAM-202ENST00000460387 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
GCSAM-202ENST00000460387 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
GCSAM-202ENST00000460387 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
GCSAM-202ENST00000460387 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
GCSAM-202ENST00000460387 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
GCSAM-202ENST00000460387 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
GCSAM-202ENST00000460387 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
GCSAM-202ENST00000460387 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
GCSAM-202ENST00000460387 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
GCSAM-202ENST00000460387 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
GCSAM-202ENST00000460387 WDR62O43379 1518 aa16.09■□□□□ 0.17
GCSAM-202ENST00000460387 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
GCSAM-202ENST00000460387 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
GCSAM-202ENST00000460387 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
GCSAM-202ENST00000460387 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
GCSAM-202ENST00000460387 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
GCSAM-202ENST00000460387 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
GCSAM-202ENST00000460387 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
GCSAM-202ENST00000460387 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
GCSAM-202ENST00000460387 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
GCSAM-202ENST00000460387 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
GCSAM-202ENST00000460387 C1QBPQ07021 282 aaKnown RBP15.82■□□□□ 0.12
GCSAM-202ENST00000460387 POTEHQ6S545 545 aa15.8■□□□□ 0.12
GCSAM-202ENST00000460387 CFTRP13569 1480 aa15.79■□□□□ 0.12
GCSAM-202ENST00000460387 URB2Q14146 1524 aaKnown RBP15.77■□□□□ 0.11
GCSAM-202ENST00000460387 WIZO95785 1651 aa15.76■□□□□ 0.11
GCSAM-202ENST00000460387 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
GCSAM-202ENST00000460387 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
GCSAM-202ENST00000460387 FBLN2P98095 1184 aa15.65■□□□□ 0.1
GCSAM-202ENST00000460387 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
GCSAM-202ENST00000460387 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
GCSAM-202ENST00000460387 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
GCSAM-202ENST00000460387 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
GCSAM-202ENST00000460387 TOP2AP11388 1531 aaKnown RBP15.56■□□□□ 0.08
GCSAM-202ENST00000460387 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
GCSAM-202ENST00000460387 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
GCSAM-202ENST00000460387 TOPBP1Q92547 1522 aa15.54■□□□□ 0.08
GCSAM-202ENST00000460387 CHD1O14646 1710 aa15.53■□□□□ 0.08
GCSAM-202ENST00000460387 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
GCSAM-202ENST00000460387 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
GCSAM-202ENST00000460387 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
GCSAM-202ENST00000460387 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
GCSAM-202ENST00000460387 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
GCSAM-202ENST00000460387 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
GCSAM-202ENST00000460387 TDRD9Q8NDG6 1382 aaKnown RBP15.35■□□□□ 0.05
GCSAM-202ENST00000460387 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
GCSAM-202ENST00000460387 SOGA1O94964 1423 aa15.34■□□□□ 0.05
GCSAM-202ENST00000460387 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.05
GCSAM-202ENST00000460387 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
GCSAM-202ENST00000460387 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
GCSAM-202ENST00000460387 WDR97A6NE52 1622 aa15.29■□□□□ 0.04
GCSAM-202ENST00000460387 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
GCSAM-202ENST00000460387 RAD54L2Q9Y4B4 1467 aa15.29■□□□□ 0.04
GCSAM-202ENST00000460387 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
GCSAM-202ENST00000460387 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
GCSAM-202ENST00000460387 FGD5Q6ZNL6 1462 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms