RNA–Protein interactions for RNA: ENST00000460099.1

NME9-204, Transcript of NME/NM23 family member 9, humanhuman

TSL 3

Gene NME9, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME9-204ENST00000460099 NISCHQ9Y2I1 1504 aa55.14■■■■■ 6.42
NME9-204ENST00000460099 CCDC180Q9P1Z9 1646 aa48.94■■■■■ 5.42
NME9-204ENST00000460099 ABCC9O60706 1549 aa47.55■■■■■ 5.2
NME9-204ENST00000460099 ZCCHC6Q5VYS8 1495 aaKnown RBP45.96■■■■■ 4.95
NME9-204ENST00000460099 DCAF8L2P0C7V8 631 aa45.94■■■■■ 4.94
NME9-204ENST00000460099 NACADO15069 1562 aa45.93■■■■■ 4.94
NME9-204ENST00000460099 RB1CC1Q8TDY2 1594 aa45.92■■■■■ 4.94
NME9-204ENST00000460099 MYO15BQ96JP2 1530 aa45.76■■■■■ 4.92
NME9-204ENST00000460099 DCAF1Q9Y4B6 1507 aa45.66■■■■■ 4.9
NME9-204ENST00000460099 UNC13AQ9UPW8 1703 aa44.92■■■■■ 4.78
NME9-204ENST00000460099 SCRIBQ14160 1630 aa44.61■■■■■ 4.73
NME9-204ENST00000460099 BICRAQ9NZM4 1560 aa44.49■■■■■ 4.71
NME9-204ENST00000460099 PABPN1Q86U42 306 aaKnown RBP eCLIP44.48■■■■■ 4.71
NME9-204ENST00000460099 SHROOM4Q9ULL8 1493 aa44.07■■■■■ 4.65
NME9-204ENST00000460099 DNAJC5BQ9UF47 199 aa43.4■■■■■ 4.54
NME9-204ENST00000460099 EIF4G1Q04637 1599 aaKnown RBP43.29■■■■■ 4.52
NME9-204ENST00000460099 CC2D2AQ9P2K1 1620 aa43.06■■■■■ 4.48
NME9-204ENST00000460099 CECR2Q9BXF3 1484 aa42.89■■■■■ 4.46
NME9-204ENST00000460099 SMARCA4P51532 1647 aa42.73■■■■■ 4.43
NME9-204ENST00000460099 BAZ1AQ9NRL2 1556 aaPredicted RBP42.73■■■■■ 4.43
NME9-204ENST00000460099 MROH2BQ7Z745 1585 aa42.48■■■■■ 4.39
NME9-204ENST00000460099 ATAD2BQ9ULI0 1458 aa42.42■■■■■ 4.38
NME9-204ENST00000460099 SMARCA2P51531 1590 aa42.4■■■■■ 4.38
NME9-204ENST00000460099 NCAPD3P42695 1498 aa42.37■■■■■ 4.37
NME9-204ENST00000460099 PEG3Q9GZU2 1588 aa42.32■■■■■ 4.37
NME9-204ENST00000460099 HMGXB3Q12766 1538 aa42.18■■■■■ 4.34
NME9-204ENST00000460099 RSF1Q96T23 1441 aaPredicted RBP42.1■■■■■ 4.33
NME9-204ENST00000460099 BAZ1BQ9UIG0 1483 aaKnown RBP42.08■■■■■ 4.33
NME9-204ENST00000460099 WIZO95785 1651 aa42.06■■■■■ 4.32
NME9-204ENST00000460099 TOP2AP11388 1531 aaKnown RBP41.62■■■■■ 4.25
NME9-204ENST00000460099 NESP48681 1621 aa41.23■■■■■ 4.19
NME9-204ENST00000460099 SUPT5HO00267 1087 aaKnown RBP41.23■■■■■ 4.19
NME9-204ENST00000460099 LAMC3Q9Y6N6 1575 aa41.22■■■■■ 4.19
NME9-204ENST00000460099 CADPSQ9ULU8 1353 aa41.14■■■■■ 4.18
NME9-204ENST00000460099 CCDC88BA6NC98 1476 aa41.13■■■■■ 4.17
NME9-204ENST00000460099 ERCC6Q03468 1493 aa40.97■■■■■ 4.15
NME9-204ENST00000460099 CFTRP13569 1480 aa40.95■■■■■ 4.15
NME9-204ENST00000460099 PDS5BQ9NTI5 1447 aa40.93■■■■■ 4.14
NME9-204ENST00000460099 KIF21AQ7Z4S6 1674 aa40.8■■■■■ 4.12
NME9-204ENST00000460099 PRDM2Q13029 1718 aa40.75■■■■■ 4.11
NME9-204ENST00000460099 FANCD2Q9BXW9 1451 aa40.65■■■■■ 4.1
NME9-204ENST00000460099 CEP164Q9UPV0 1460 aa40.58■■■■■ 4.09
NME9-204ENST00000460099 THOC2Q8NI27 1593 aaKnown RBP40.57■■■■■ 4.08
NME9-204ENST00000460099 CUX2O14529 1486 aa40.46■■■■■ 4.07
NME9-204ENST00000460099 MRC2Q9UBG0 1479 aa40.46■■■■■ 4.07
NME9-204ENST00000460099 WDR62O43379 1518 aa40.32■■■■■ 4.05
NME9-204ENST00000460099 URB2Q14146 1524 aaKnown RBP40.22■■■■■ 4.03
NME9-204ENST00000460099 ABCC8Q09428 1581 aa40.1■■■■■ 4.01
NME9-204ENST00000460099 TOPBP1Q92547 1522 aa40.05■■■■■ 4
NME9-204ENST00000460099 DNMBPQ6XZF7 1577 aa40.03■■■■■ 4
NME9-204ENST00000460099 CUX1P39880 1505 aa39.83■■■■□ 3.97
NME9-204ENST00000460099 IFT140Q96RY7 1462 aa39.73■■■■□ 3.95
NME9-204ENST00000460099 POLA1P09884 1462 aaPredicted RBP39.71■■■■□ 3.95
NME9-204ENST00000460099 WRNQ14191 1432 aaPredicted RBP eCLIP39.68■■■■□ 3.94
NME9-204ENST00000460099 FGD5Q6ZNL6 1462 aa39.66■■■■□ 3.94
NME9-204ENST00000460099 TARBP1Q13395 1621 aaKnown RBP39.6■■■■□ 3.93
NME9-204ENST00000460099 BIVM-ERCC5R4GMW8 1640 aa39.6■■■■□ 3.93
NME9-204ENST00000460099 TOP2BQ02880 1626 aa39.59■■■■□ 3.93
NME9-204ENST00000460099 SOGA1O94964 1423 aa39.57■■■■□ 3.93
NME9-204ENST00000460099 SYNJ1O43426 1573 aa39.56■■■■□ 3.92
NME9-204ENST00000460099 RAD54L2Q9Y4B4 1467 aa39.53■■■■□ 3.92
NME9-204ENST00000460099 ZNF608Q9ULD9 1512 aaPredicted RBP39.5■■■■□ 3.91
NME9-204ENST00000460099 EIF4G3O43432 1585 aaKnown RBP39.37■■■■□ 3.89
NME9-204ENST00000460099 WDR97A6NE52 1622 aa39.35■■■■□ 3.89
NME9-204ENST00000460099 AQRO60306 1485 aaKnown RBP eCLIP39.32■■■■□ 3.89
NME9-204ENST00000460099 ABCA10Q8WWZ4 1543 aa39.3■■■■□ 3.88
NME9-204ENST00000460099 TDRD9Q8NDG6 1382 aaKnown RBP39.29■■■■□ 3.88
NME9-204ENST00000460099 GAPVD1Q14C86 1478 aa39.12■■■■□ 3.85
NME9-204ENST00000460099 ABCA5Q8WWZ7 1642 aa39.12■■■■□ 3.85
NME9-204ENST00000460099 GRIN2BQ13224 1484 aa39.07■■■■□ 3.85
NME9-204ENST00000460099 PBRM1Q86U86 1689 aa39.05■■■■□ 3.84
NME9-204ENST00000460099 TRIM41Q8WV44 630 aa38.96■■■■□ 3.83
NME9-204ENST00000460099 SNAPC4Q5SXM2 1469 aa38.96■■■■□ 3.83
NME9-204ENST00000460099 MAGI1Q96QZ7 1491 aaPredicted RBP38.95■■■■□ 3.83
NME9-204ENST00000460099 DNAJC5Q9H3Z4 198 aa38.91■■■■□ 3.82
NME9-204ENST00000460099 CHD1O14646 1710 aa38.87■■■■□ 3.81
NME9-204ENST00000460099 OSCARQ8IYS5 282 aa38.86■■■■□ 3.81
NME9-204ENST00000460099 ERICH3Q5RHP9 1530 aa38.85■■■■□ 3.81
NME9-204ENST00000460099 KIF27Q86VH2 1401 aa38.85■■■■□ 3.81
NME9-204ENST00000460099 FBLN2P98095 1184 aa38.8■■■■□ 3.8
NME9-204ENST00000460099 SYNJ2O15056 1496 aa38.79■■■■□ 3.8
NME9-204ENST00000460099 CHMP7Q8WUX9 453 aaPredicted RBP38.76■■■■□ 3.8
NME9-204ENST00000460099 ADAMTS12P58397 1594 aa38.72■■■■□ 3.79
NME9-204ENST00000460099 FHAD1B1AJZ9 1412 aa38.68■■■■□ 3.78
NME9-204ENST00000460099 CHIC1Q5VXU3 224 aa38.66■■■■□ 3.78
NME9-204ENST00000460099 IGF1RP08069 1367 aa38.66■■■■□ 3.78
NME9-204ENST00000460099 CUL7Q14999 1698 aa38.56■■■■□ 3.76
NME9-204ENST00000460099 GRIN2AQ12879 1464 aa38.56■■■■□ 3.76
NME9-204ENST00000460099 RUSC2Q8N2Y8 1516 aa38.56■■■■□ 3.76
NME9-204ENST00000460099 CARMIL1Q5VZK9 1371 aa38.44■■■■□ 3.74
NME9-204ENST00000460099 CLASP1Q7Z460 1538 aa38.42■■■■□ 3.74
NME9-204ENST00000460099 NUP160Q12769 1436 aa38.38■■■■□ 3.74
NME9-204ENST00000460099 CEP170Q5SW79 1584 aa38.36■■■■□ 3.73
NME9-204ENST00000460099 EEA1Q15075 1411 aa38.3■■■■□ 3.72
NME9-204ENST00000460099 RAPGEF2Q9Y4G8 1499 aa38.24■■■■□ 3.71
NME9-204ENST00000460099 CSRNP3Q8WYN3 585 aa38.22■■■■□ 3.71
NME9-204ENST00000460099 ARHGEF11O15085 1522 aa38.19■■■■□ 3.7
NME9-204ENST00000460099 RIMBP3CA6NJZ7 1639 aa38.19■■■■□ 3.7
NME9-204ENST00000460099 RIMBP3BA6NNM3 1639 aa38.19■■■■□ 3.7
NME9-204ENST00000460099 RIMBP3Q9UFD9 1639 aa38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 362.2 ms