RNA–Protein interactions for RNA: ENST00000460098.1

MKNK1-206, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 3

Gene MKNK1, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-206ENST00000460098 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
MKNK1-206ENST00000460098 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
MKNK1-206ENST00000460098 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
MKNK1-206ENST00000460098 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
MKNK1-206ENST00000460098 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
MKNK1-206ENST00000460098 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
MKNK1-206ENST00000460098 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
MKNK1-206ENST00000460098 NACADO15069 1562 aa14.85□□□□□ -0.03
MKNK1-206ENST00000460098 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
MKNK1-206ENST00000460098 ABCC9O60706 1549 aa14.69□□□□□ -0.06
MKNK1-206ENST00000460098 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
MKNK1-206ENST00000460098 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
MKNK1-206ENST00000460098 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
MKNK1-206ENST00000460098 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
MKNK1-206ENST00000460098 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
MKNK1-206ENST00000460098 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
MKNK1-206ENST00000460098 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
MKNK1-206ENST00000460098 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
MKNK1-206ENST00000460098 WIZO95785 1651 aa14.15□□□□□ -0.14
MKNK1-206ENST00000460098 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
MKNK1-206ENST00000460098 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
MKNK1-206ENST00000460098 TOP2AP11388 1531 aaKnown RBP14.09□□□□□ -0.15
MKNK1-206ENST00000460098 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
MKNK1-206ENST00000460098 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
MKNK1-206ENST00000460098 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
MKNK1-206ENST00000460098 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
MKNK1-206ENST00000460098 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
MKNK1-206ENST00000460098 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
MKNK1-206ENST00000460098 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
MKNK1-206ENST00000460098 LOC105371045A0A1W2PR82 267 aa13.78□□□□□ -0.2
MKNK1-206ENST00000460098 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
MKNK1-206ENST00000460098 EEA1Q15075 1411 aa13.71□□□□□ -0.22
MKNK1-206ENST00000460098 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
MKNK1-206ENST00000460098 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
MKNK1-206ENST00000460098 ABCC8Q09428 1581 aa13.65□□□□□ -0.22
MKNK1-206ENST00000460098 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
MKNK1-206ENST00000460098 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
MKNK1-206ENST00000460098 FAM9AQ8IZU1 332 aaPredicted RBP13.58□□□□□ -0.24
MKNK1-206ENST00000460098 HRCP23327 699 aa13.56□□□□□ -0.24
MKNK1-206ENST00000460098 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
MKNK1-206ENST00000460098 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
MKNK1-206ENST00000460098 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
MKNK1-206ENST00000460098 SYNJ1O43426 1573 aa13.5□□□□□ -0.25
MKNK1-206ENST00000460098 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
MKNK1-206ENST00000460098 TNIKQ9UKE5 1360 aa13.49□□□□□ -0.25
MKNK1-206ENST00000460098 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
MKNK1-206ENST00000460098 SOGA1O94964 1423 aa13.47□□□□□ -0.25
MKNK1-206ENST00000460098 KIF21BO75037 1637 aa13.47□□□□□ -0.25
MKNK1-206ENST00000460098 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
MKNK1-206ENST00000460098 CFTRP13569 1480 aa13.44□□□□□ -0.26
MKNK1-206ENST00000460098 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
MKNK1-206ENST00000460098 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
MKNK1-206ENST00000460098 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
MKNK1-206ENST00000460098 RUSC2Q8N2Y8 1516 aa13.38□□□□□ -0.27
MKNK1-206ENST00000460098 ZEB1P37275 1124 aaPredicted RBP13.35□□□□□ -0.27
MKNK1-206ENST00000460098 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
MKNK1-206ENST00000460098 ERICH3Q5RHP9 1530 aa13.34□□□□□ -0.27
MKNK1-206ENST00000460098 CUX1P39880 1505 aa13.3□□□□□ -0.28
MKNK1-206ENST00000460098 CADPSQ9ULU8 1353 aa13.3□□□□□ -0.28
MKNK1-206ENST00000460098 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
MKNK1-206ENST00000460098 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
MKNK1-206ENST00000460098 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
MKNK1-206ENST00000460098 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
MKNK1-206ENST00000460098 RAPGEF2Q9Y4G8 1499 aa13.21□□□□□ -0.3
MKNK1-206ENST00000460098 CLIP1P30622 1438 aa13.21□□□□□ -0.3
MKNK1-206ENST00000460098 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
MKNK1-206ENST00000460098 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
MKNK1-206ENST00000460098 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
MKNK1-206ENST00000460098 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
MKNK1-206ENST00000460098 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
MKNK1-206ENST00000460098 CUX2O14529 1486 aa13.08□□□□□ -0.32
MKNK1-206ENST00000460098 APLP2Q06481 763 aa13.06□□□□□ -0.32
MKNK1-206ENST00000460098 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
MKNK1-206ENST00000460098 IGF1RP08069 1367 aa13.06□□□□□ -0.32
MKNK1-206ENST00000460098 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
MKNK1-206ENST00000460098 CUL7Q14999 1698 aa13.02□□□□□ -0.32
MKNK1-206ENST00000460098 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.33
MKNK1-206ENST00000460098 ARAP1Q96P48 1450 aa13.02□□□□□ -0.33
MKNK1-206ENST00000460098 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
MKNK1-206ENST00000460098 WDR97A6NE52 1622 aa13□□□□□ -0.33
MKNK1-206ENST00000460098 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
MKNK1-206ENST00000460098 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
MKNK1-206ENST00000460098 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
MKNK1-206ENST00000460098 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
MKNK1-206ENST00000460098 NESP48681 1621 aa12.95□□□□□ -0.34
MKNK1-206ENST00000460098 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
MKNK1-206ENST00000460098 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
MKNK1-206ENST00000460098 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
MKNK1-206ENST00000460098 CTTNBP2Q8WZ74 1663 aa12.93□□□□□ -0.34
MKNK1-206ENST00000460098 ABCA5Q8WWZ7 1642 aa12.92□□□□□ -0.34
MKNK1-206ENST00000460098 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
MKNK1-206ENST00000460098 KIF21AQ7Z4S6 1674 aa12.9□□□□□ -0.34
MKNK1-206ENST00000460098 RAD54L2Q9Y4B4 1467 aa12.89□□□□□ -0.35
MKNK1-206ENST00000460098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
MKNK1-206ENST00000460098 RRBP1Q9P2E9 1410 aaKnown RBP12.87□□□□□ -0.35
MKNK1-206ENST00000460098 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.35
MKNK1-206ENST00000460098 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
MKNK1-206ENST00000460098 TARBP1Q13395 1621 aaKnown RBP12.85□□□□□ -0.35
MKNK1-206ENST00000460098 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
MKNK1-206ENST00000460098 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms