RNA–Protein interactions for RNA: ENST00000460043.5

CDK5RAP1-205, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-205ENST00000460043 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
CDK5RAP1-205ENST00000460043 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.06
CDK5RAP1-205ENST00000460043 ABCC9O60706 1549 aa27.64■■■□□ 2.02
CDK5RAP1-205ENST00000460043 ZCCHC6Q5VYS8 1495 aaKnown RBP26.75■■□□□ 1.87
CDK5RAP1-205ENST00000460043 DCAF8L2P0C7V8 631 aa26.45■■□□□ 1.82
CDK5RAP1-205ENST00000460043 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
CDK5RAP1-205ENST00000460043 DNAJC5BQ9UF47 199 aa26.39■■□□□ 1.82
CDK5RAP1-205ENST00000460043 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
CDK5RAP1-205ENST00000460043 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
CDK5RAP1-205ENST00000460043 NACADO15069 1562 aa26.12■■□□□ 1.77
CDK5RAP1-205ENST00000460043 SHROOM4Q9ULL8 1493 aa25.81■■□□□ 1.72
CDK5RAP1-205ENST00000460043 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
CDK5RAP1-205ENST00000460043 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
CDK5RAP1-205ENST00000460043 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
CDK5RAP1-205ENST00000460043 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
CDK5RAP1-205ENST00000460043 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
CDK5RAP1-205ENST00000460043 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
CDK5RAP1-205ENST00000460043 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
CDK5RAP1-205ENST00000460043 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
CDK5RAP1-205ENST00000460043 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
CDK5RAP1-205ENST00000460043 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
CDK5RAP1-205ENST00000460043 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
CDK5RAP1-205ENST00000460043 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
CDK5RAP1-205ENST00000460043 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
CDK5RAP1-205ENST00000460043 WIZO95785 1651 aa24.35■■□□□ 1.49
CDK5RAP1-205ENST00000460043 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
CDK5RAP1-205ENST00000460043 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
CDK5RAP1-205ENST00000460043 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
CDK5RAP1-205ENST00000460043 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
CDK5RAP1-205ENST00000460043 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
CDK5RAP1-205ENST00000460043 CUX2O14529 1486 aa24.1■■□□□ 1.45
CDK5RAP1-205ENST00000460043 NCAPD3P42695 1498 aa24.1■■□□□ 1.45
CDK5RAP1-205ENST00000460043 HMGXB3Q12766 1538 aa24.04■■□□□ 1.44
CDK5RAP1-205ENST00000460043 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
CDK5RAP1-205ENST00000460043 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
CDK5RAP1-205ENST00000460043 NESP48681 1621 aa23.6■■□□□ 1.37
CDK5RAP1-205ENST00000460043 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
CDK5RAP1-205ENST00000460043 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
CDK5RAP1-205ENST00000460043 CFTRP13569 1480 aa23.48■■□□□ 1.35
CDK5RAP1-205ENST00000460043 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
CDK5RAP1-205ENST00000460043 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
CDK5RAP1-205ENST00000460043 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
CDK5RAP1-205ENST00000460043 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
CDK5RAP1-205ENST00000460043 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
CDK5RAP1-205ENST00000460043 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
CDK5RAP1-205ENST00000460043 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
CDK5RAP1-205ENST00000460043 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
CDK5RAP1-205ENST00000460043 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
CDK5RAP1-205ENST00000460043 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
CDK5RAP1-205ENST00000460043 WDR62O43379 1518 aa23.09■■□□□ 1.29
CDK5RAP1-205ENST00000460043 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
CDK5RAP1-205ENST00000460043 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
CDK5RAP1-205ENST00000460043 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
CDK5RAP1-205ENST00000460043 CUX1P39880 1505 aa23.03■■□□□ 1.28
CDK5RAP1-205ENST00000460043 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
CDK5RAP1-205ENST00000460043 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
CDK5RAP1-205ENST00000460043 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
CDK5RAP1-205ENST00000460043 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
CDK5RAP1-205ENST00000460043 EEA1Q15075 1411 aa22.87■■□□□ 1.25
CDK5RAP1-205ENST00000460043 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
CDK5RAP1-205ENST00000460043 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
CDK5RAP1-205ENST00000460043 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
CDK5RAP1-205ENST00000460043 SOGA1O94964 1423 aa22.82■■□□□ 1.24
CDK5RAP1-205ENST00000460043 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
CDK5RAP1-205ENST00000460043 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
CDK5RAP1-205ENST00000460043 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
CDK5RAP1-205ENST00000460043 RUSC2Q8N2Y8 1516 aa22.71■■□□□ 1.23
CDK5RAP1-205ENST00000460043 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
CDK5RAP1-205ENST00000460043 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
CDK5RAP1-205ENST00000460043 RIMBP3CA6NJZ7 1639 aa22.62■■□□□ 1.21
CDK5RAP1-205ENST00000460043 RIMBP3BA6NNM3 1639 aa22.62■■□□□ 1.21
CDK5RAP1-205ENST00000460043 RIMBP3Q9UFD9 1639 aa22.62■■□□□ 1.21
CDK5RAP1-205ENST00000460043 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
CDK5RAP1-205ENST00000460043 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
CDK5RAP1-205ENST00000460043 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
CDK5RAP1-205ENST00000460043 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
CDK5RAP1-205ENST00000460043 ARHGEF11O15085 1522 aa22.52■■□□□ 1.19
CDK5RAP1-205ENST00000460043 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
CDK5RAP1-205ENST00000460043 KIF21BO75037 1637 aa22.49■■□□□ 1.19
CDK5RAP1-205ENST00000460043 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
CDK5RAP1-205ENST00000460043 IGF1RP08069 1367 aa22.49■■□□□ 1.19
CDK5RAP1-205ENST00000460043 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
CDK5RAP1-205ENST00000460043 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
CDK5RAP1-205ENST00000460043 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
CDK5RAP1-205ENST00000460043 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
CDK5RAP1-205ENST00000460043 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
CDK5RAP1-205ENST00000460043 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
CDK5RAP1-205ENST00000460043 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
CDK5RAP1-205ENST00000460043 CARMIL1Q5VZK9 1371 aa22.4■■□□□ 1.18
CDK5RAP1-205ENST00000460043 RAPGEF2Q9Y4G8 1499 aa22.38■■□□□ 1.17
CDK5RAP1-205ENST00000460043 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
CDK5RAP1-205ENST00000460043 AQRO60306 1485 aaKnown RBP eCLIP22.36■■□□□ 1.174e-7■■■■□ 22.9
CDK5RAP1-205ENST00000460043 CUL7Q14999 1698 aa22.35■■□□□ 1.17
CDK5RAP1-205ENST00000460043 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
CDK5RAP1-205ENST00000460043 CYB5RLQ6IPT4 315 aa22.34■■□□□ 1.17
CDK5RAP1-205ENST00000460043 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
CDK5RAP1-205ENST00000460043 PBRM1Q86U86 1689 aa22.27■■□□□ 1.16
CDK5RAP1-205ENST00000460043 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
CDK5RAP1-205ENST00000460043 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
CDK5RAP1-205ENST00000460043 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 728 ms