RNA–Protein interactions for RNA: ENST00000458625.5

CCL25-204, Transcript of C-C motif chemokine ligand 25, humanhuman

TSL 5

Gene CCL25, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL25-204ENST00000458625 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
CCL25-204ENST00000458625 ABCC9O60706 1549 aa28.69■■■□□ 2.18
CCL25-204ENST00000458625 CCDC180Q9P1Z9 1646 aa28.02■■■□□ 2.08
CCL25-204ENST00000458625 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
CCL25-204ENST00000458625 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
CCL25-204ENST00000458625 NACADO15069 1562 aa26.63■■□□□ 1.85
CCL25-204ENST00000458625 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
CCL25-204ENST00000458625 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.82
CCL25-204ENST00000458625 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
CCL25-204ENST00000458625 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
CCL25-204ENST00000458625 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
CCL25-204ENST00000458625 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
CCL25-204ENST00000458625 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
CCL25-204ENST00000458625 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
CCL25-204ENST00000458625 DNAJC5Q9H3Z4 198 aa25.67■■□□□ 1.7
CCL25-204ENST00000458625 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
CCL25-204ENST00000458625 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
CCL25-204ENST00000458625 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
CCL25-204ENST00000458625 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
CCL25-204ENST00000458625 CUX2O14529 1486 aa24.92■■□□□ 1.58
CCL25-204ENST00000458625 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
CCL25-204ENST00000458625 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
CCL25-204ENST00000458625 NESP48681 1621 aa24.51■■□□□ 1.51
CCL25-204ENST00000458625 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
CCL25-204ENST00000458625 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
CCL25-204ENST00000458625 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
CCL25-204ENST00000458625 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
CCL25-204ENST00000458625 SMARCA4P51532 1647 aa24.3■■□□□ 1.48
CCL25-204ENST00000458625 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
CCL25-204ENST00000458625 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
CCL25-204ENST00000458625 LAMC3Q9Y6N6 1575 aa24.14■■□□□ 1.45
CCL25-204ENST00000458625 KIF21AQ7Z4S6 1674 aa24.14■■□□□ 1.45
CCL25-204ENST00000458625 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
CCL25-204ENST00000458625 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
CCL25-204ENST00000458625 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
CCL25-204ENST00000458625 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
CCL25-204ENST00000458625 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
CCL25-204ENST00000458625 WDR62O43379 1518 aa23.85■■□□□ 1.41
CCL25-204ENST00000458625 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
CCL25-204ENST00000458625 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
CCL25-204ENST00000458625 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
CCL25-204ENST00000458625 FANCD2Q9BXW9 1451 aa23.58■■□□□ 1.37
CCL25-204ENST00000458625 WIZO95785 1651 aa23.57■■□□□ 1.36
CCL25-204ENST00000458625 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
CCL25-204ENST00000458625 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
CCL25-204ENST00000458625 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
CCL25-204ENST00000458625 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
CCL25-204ENST00000458625 CFTRP13569 1480 aa23.45■■□□□ 1.34
CCL25-204ENST00000458625 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
CCL25-204ENST00000458625 ZNF608Q9ULD9 1512 aaPredicted RBP23.3■■□□□ 1.32
CCL25-204ENST00000458625 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
CCL25-204ENST00000458625 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
CCL25-204ENST00000458625 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
CCL25-204ENST00000458625 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
CCL25-204ENST00000458625 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
CCL25-204ENST00000458625 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
CCL25-204ENST00000458625 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
CCL25-204ENST00000458625 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
CCL25-204ENST00000458625 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
CCL25-204ENST00000458625 CHD1O14646 1710 aa23.05■■□□□ 1.28
CCL25-204ENST00000458625 AQRO60306 1485 aaKnown RBP eCLIP22.99■■□□□ 1.27
CCL25-204ENST00000458625 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
CCL25-204ENST00000458625 TARBP1Q13395 1621 aaKnown RBP22.94■■□□□ 1.26
CCL25-204ENST00000458625 DNMBPQ6XZF7 1577 aa22.91■■□□□ 1.26
CCL25-204ENST00000458625 FBLN2P98095 1184 aa22.89■■□□□ 1.25
CCL25-204ENST00000458625 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
CCL25-204ENST00000458625 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
CCL25-204ENST00000458625 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
CCL25-204ENST00000458625 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
CCL25-204ENST00000458625 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
CCL25-204ENST00000458625 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
CCL25-204ENST00000458625 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
CCL25-204ENST00000458625 SOGA1O94964 1423 aa22.66■■□□□ 1.22
CCL25-204ENST00000458625 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
CCL25-204ENST00000458625 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
CCL25-204ENST00000458625 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
CCL25-204ENST00000458625 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
CCL25-204ENST00000458625 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
CCL25-204ENST00000458625 GAPVD1Q14C86 1478 aa22.55■■□□□ 1.2
CCL25-204ENST00000458625 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
CCL25-204ENST00000458625 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
CCL25-204ENST00000458625 CUX1P39880 1505 aa22.49■■□□□ 1.19
CCL25-204ENST00000458625 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
CCL25-204ENST00000458625 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
CCL25-204ENST00000458625 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
CCL25-204ENST00000458625 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
CCL25-204ENST00000458625 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.15
CCL25-204ENST00000458625 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
CCL25-204ENST00000458625 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
CCL25-204ENST00000458625 NUP160Q12769 1436 aa22.23■■□□□ 1.15
CCL25-204ENST00000458625 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
CCL25-204ENST00000458625 ADAMTS12P58397 1594 aa22.18■■□□□ 1.14
CCL25-204ENST00000458625 KDM4FA0A1W2PPD8 638 aa22.06■■□□□ 1.12
CCL25-204ENST00000458625 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
CCL25-204ENST00000458625 PRG4Q92954 1404 aaPredicted RBP22.05■■□□□ 1.12
CCL25-204ENST00000458625 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
CCL25-204ENST00000458625 FAM69CQ0P6D2 419 aa22.03■■□□□ 1.12
CCL25-204ENST00000458625 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
CCL25-204ENST00000458625 ILDR1Q86SU0 546 aaPredicted RBP22.01■■□□□ 1.11
CCL25-204ENST00000458625 DIP2BQ9P265 1576 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms