RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 NISCHQ9Y2I1 1504 aa40.15■■■■■ 4.02
TRIM39-211ENST00000458516 CCDC180Q9P1Z9 1646 aa35.53■■■■□ 3.28
TRIM39-211ENST00000458516 ABCC9O60706 1549 aa34.17■■■■□ 3.06
TRIM39-211ENST00000458516 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
TRIM39-211ENST00000458516 DCAF1Q9Y4B6 1507 aa33.26■■■□□ 2.91
TRIM39-211ENST00000458516 NACADO15069 1562 aa33.21■■■□□ 2.91
TRIM39-211ENST00000458516 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
TRIM39-211ENST00000458516 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
TRIM39-211ENST00000458516 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
TRIM39-211ENST00000458516 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
TRIM39-211ENST00000458516 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
TRIM39-211ENST00000458516 BICRAQ9NZM4 1560 aa32.15■■■□□ 2.74
TRIM39-211ENST00000458516 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
TRIM39-211ENST00000458516 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
TRIM39-211ENST00000458516 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
TRIM39-211ENST00000458516 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
TRIM39-211ENST00000458516 BAZ1AQ9NRL2 1556 aaPredicted RBP31.09■■■□□ 2.57
TRIM39-211ENST00000458516 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
TRIM39-211ENST00000458516 CC2D2AQ9P2K1 1620 aa30.98■■■□□ 2.55
TRIM39-211ENST00000458516 MROH2BQ7Z745 1585 aa30.96■■■□□ 2.55
TRIM39-211ENST00000458516 DNAJC5BQ9UF47 199 aa30.84■■■□□ 2.53
TRIM39-211ENST00000458516 RSF1Q96T23 1441 aaPredicted RBP30.77■■■□□ 2.52
TRIM39-211ENST00000458516 PEG3Q9GZU2 1588 aa30.76■■■□□ 2.52
TRIM39-211ENST00000458516 SMARCA2P51531 1590 aa30.72■■■□□ 2.51
TRIM39-211ENST00000458516 ATAD2BQ9ULI0 1458 aa30.72■■■□□ 2.51
TRIM39-211ENST00000458516 WIZO95785 1651 aa30.7■■■□□ 2.5
TRIM39-211ENST00000458516 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
TRIM39-211ENST00000458516 HMGXB3Q12766 1538 aa30.56■■■□□ 2.48
TRIM39-211ENST00000458516 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
TRIM39-211ENST00000458516 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
TRIM39-211ENST00000458516 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
TRIM39-211ENST00000458516 CCDC88BA6NC98 1476 aa29.98■■■□□ 2.39
TRIM39-211ENST00000458516 LAMC3Q9Y6N6 1575 aa29.76■■■□□ 2.35
TRIM39-211ENST00000458516 NESP48681 1621 aa29.75■■■□□ 2.35
TRIM39-211ENST00000458516 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
TRIM39-211ENST00000458516 CFTRP13569 1480 aa29.69■■■□□ 2.34
TRIM39-211ENST00000458516 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
TRIM39-211ENST00000458516 KIF21AQ7Z4S6 1674 aa29.5■■■□□ 2.31
TRIM39-211ENST00000458516 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
TRIM39-211ENST00000458516 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
TRIM39-211ENST00000458516 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
TRIM39-211ENST00000458516 CEP164Q9UPV0 1460 aa29.33■■■□□ 2.29
TRIM39-211ENST00000458516 THOC2Q8NI27 1593 aaKnown RBP29.25■■■□□ 2.27
TRIM39-211ENST00000458516 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
TRIM39-211ENST00000458516 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
TRIM39-211ENST00000458516 WDR62O43379 1518 aa29.1■■■□□ 2.25
TRIM39-211ENST00000458516 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
TRIM39-211ENST00000458516 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
TRIM39-211ENST00000458516 CUX1P39880 1505 aa29.03■■■□□ 2.24
TRIM39-211ENST00000458516 TOPBP1Q92547 1522 aa29.03■■■□□ 2.24
TRIM39-211ENST00000458516 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.23
TRIM39-211ENST00000458516 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
TRIM39-211ENST00000458516 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.23
TRIM39-211ENST00000458516 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
TRIM39-211ENST00000458516 CUX2O14529 1486 aa28.9■■■□□ 2.22
TRIM39-211ENST00000458516 FGD5Q6ZNL6 1462 aa28.83■■■□□ 2.21
TRIM39-211ENST00000458516 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
TRIM39-211ENST00000458516 TARBP1Q13395 1621 aaKnown RBP28.71■■■□□ 2.19
TRIM39-211ENST00000458516 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
TRIM39-211ENST00000458516 RAD54L2Q9Y4B4 1467 aa28.67■■■□□ 2.18
TRIM39-211ENST00000458516 WDR97A6NE52 1622 aa28.66■■■□□ 2.18
TRIM39-211ENST00000458516 SOGA1O94964 1423 aa28.65■■■□□ 2.18
TRIM39-211ENST00000458516 CHIC1Q5VXU3 224 aa28.63■■■□□ 2.17
TRIM39-211ENST00000458516 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
TRIM39-211ENST00000458516 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
TRIM39-211ENST00000458516 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
TRIM39-211ENST00000458516 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
TRIM39-211ENST00000458516 ABCA5Q8WWZ7 1642 aa28.46■■■□□ 2.15
TRIM39-211ENST00000458516 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
TRIM39-211ENST00000458516 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.144e-6■■■■■ 31
TRIM39-211ENST00000458516 PBRM1Q86U86 1689 aa28.38■■■□□ 2.13
TRIM39-211ENST00000458516 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
TRIM39-211ENST00000458516 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
TRIM39-211ENST00000458516 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
TRIM39-211ENST00000458516 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
TRIM39-211ENST00000458516 ERICH3Q5RHP9 1530 aa28.24■■■□□ 2.11
TRIM39-211ENST00000458516 SNAPC4Q5SXM2 1469 aa28.2■■■□□ 2.1
TRIM39-211ENST00000458516 MAGI1Q96QZ7 1491 aaPredicted RBP28.16■■■□□ 2.1
TRIM39-211ENST00000458516 ADAMTS12P58397 1594 aa28.15■■■□□ 2.1
TRIM39-211ENST00000458516 EEA1Q15075 1411 aa28.14■■■□□ 2.1
TRIM39-211ENST00000458516 IGF1RP08069 1367 aa28.13■■■□□ 2.09
TRIM39-211ENST00000458516 CUL7Q14999 1698 aa28.13■■■□□ 2.09
TRIM39-211ENST00000458516 CHD1O14646 1710 aa28.08■■■□□ 2.09
TRIM39-211ENST00000458516 SYNJ2O15056 1496 aa28.04■■■□□ 2.08
TRIM39-211ENST00000458516 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
TRIM39-211ENST00000458516 FAM9AQ8IZU1 332 aaPredicted RBP28■■■□□ 2.07
TRIM39-211ENST00000458516 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
TRIM39-211ENST00000458516 CARMIL1Q5VZK9 1371 aa27.98■■■□□ 2.07
TRIM39-211ENST00000458516 PRXQ9BXM0 1461 aa27.95■■■□□ 2.06
TRIM39-211ENST00000458516 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
TRIM39-211ENST00000458516 CHMP7Q8WUX9 453 aaPredicted RBP27.91■■■□□ 2.06
TRIM39-211ENST00000458516 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.06
TRIM39-211ENST00000458516 FBLN2P98095 1184 aa27.89■■■□□ 2.06
TRIM39-211ENST00000458516 KIF21BO75037 1637 aa27.89■■■□□ 2.05
TRIM39-211ENST00000458516 DNAJC5Q9H3Z4 198 aa27.87■■■□□ 2.05
TRIM39-211ENST00000458516 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
TRIM39-211ENST00000458516 NUP160Q12769 1436 aa27.8■■■□□ 2.04
TRIM39-211ENST00000458516 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
TRIM39-211ENST00000458516 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
TRIM39-211ENST00000458516 OSCARQ8IYS5 282 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms