RNA–Protein interactions for RNA: ENST00000458383.1

VSIG1-203, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

TSL 4

Gene VSIG1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-203ENST00000458383 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
VSIG1-203ENST00000458383 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
VSIG1-203ENST00000458383 ABCC9O60706 1549 aa15.67■□□□□ 0.1
VSIG1-203ENST00000458383 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
VSIG1-203ENST00000458383 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
VSIG1-203ENST00000458383 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
VSIG1-203ENST00000458383 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
VSIG1-203ENST00000458383 NACADO15069 1562 aa15.37■□□□□ 0.05
VSIG1-203ENST00000458383 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
VSIG1-203ENST00000458383 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
VSIG1-203ENST00000458383 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
VSIG1-203ENST00000458383 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
VSIG1-203ENST00000458383 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
VSIG1-203ENST00000458383 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
VSIG1-203ENST00000458383 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
VSIG1-203ENST00000458383 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
VSIG1-203ENST00000458383 RSF1Q96T23 1441 aaPredicted RBP14.38□□□□□ -0.11
VSIG1-203ENST00000458383 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
VSIG1-203ENST00000458383 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
VSIG1-203ENST00000458383 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
VSIG1-203ENST00000458383 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.13
VSIG1-203ENST00000458383 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
VSIG1-203ENST00000458383 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
VSIG1-203ENST00000458383 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
VSIG1-203ENST00000458383 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
VSIG1-203ENST00000458383 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
VSIG1-203ENST00000458383 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
VSIG1-203ENST00000458383 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
VSIG1-203ENST00000458383 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
VSIG1-203ENST00000458383 WIZO95785 1651 aa14.11□□□□□ -0.15
VSIG1-203ENST00000458383 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
VSIG1-203ENST00000458383 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
VSIG1-203ENST00000458383 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.19
VSIG1-203ENST00000458383 CFTRP13569 1480 aa13.81□□□□□ -0.2
VSIG1-203ENST00000458383 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
VSIG1-203ENST00000458383 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
VSIG1-203ENST00000458383 NESP48681 1621 aa13.63□□□□□ -0.23
VSIG1-203ENST00000458383 FANCD2Q9BXW9 1451 aa13.62□□□□□ -0.23
VSIG1-203ENST00000458383 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
VSIG1-203ENST00000458383 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
VSIG1-203ENST00000458383 CHIC1Q5VXU3 224 aa13.56□□□□□ -0.24
VSIG1-203ENST00000458383 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
VSIG1-203ENST00000458383 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
VSIG1-203ENST00000458383 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
VSIG1-203ENST00000458383 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
VSIG1-203ENST00000458383 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
VSIG1-203ENST00000458383 CUX1P39880 1505 aa13.44□□□□□ -0.26
VSIG1-203ENST00000458383 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
VSIG1-203ENST00000458383 TOPBP1Q92547 1522 aa13.43□□□□□ -0.26
VSIG1-203ENST00000458383 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
VSIG1-203ENST00000458383 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
VSIG1-203ENST00000458383 WDR62O43379 1518 aa13.4□□□□□ -0.26
VSIG1-203ENST00000458383 SYNJ1O43426 1573 aa13.4□□□□□ -0.26
VSIG1-203ENST00000458383 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
VSIG1-203ENST00000458383 BIVM-ERCC5R4GMW8 1640 aa13.36□□□□□ -0.27
VSIG1-203ENST00000458383 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
VSIG1-203ENST00000458383 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
VSIG1-203ENST00000458383 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
VSIG1-203ENST00000458383 SOGA1O94964 1423 aa13.33□□□□□ -0.28
VSIG1-203ENST00000458383 EEA1Q15075 1411 aa13.33□□□□□ -0.28
VSIG1-203ENST00000458383 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
VSIG1-203ENST00000458383 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
VSIG1-203ENST00000458383 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
VSIG1-203ENST00000458383 CUX2O14529 1486 aa13.29□□□□□ -0.28
VSIG1-203ENST00000458383 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
VSIG1-203ENST00000458383 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
VSIG1-203ENST00000458383 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
VSIG1-203ENST00000458383 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
VSIG1-203ENST00000458383 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
VSIG1-203ENST00000458383 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
VSIG1-203ENST00000458383 IGF1RP08069 1367 aa13.16□□□□□ -0.3
VSIG1-203ENST00000458383 AEBP2Q6ZN18 517 aaPredicted RBP13.15□□□□□ -0.3
VSIG1-203ENST00000458383 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
VSIG1-203ENST00000458383 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
VSIG1-203ENST00000458383 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
VSIG1-203ENST00000458383 RUSC2Q8N2Y8 1516 aa13.13□□□□□ -0.31
VSIG1-203ENST00000458383 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
VSIG1-203ENST00000458383 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.31
VSIG1-203ENST00000458383 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
VSIG1-203ENST00000458383 PRXQ9BXM0 1461 aa13.1□□□□□ -0.31
VSIG1-203ENST00000458383 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
VSIG1-203ENST00000458383 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
VSIG1-203ENST00000458383 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
VSIG1-203ENST00000458383 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
VSIG1-203ENST00000458383 RAPGEF2Q9Y4G8 1499 aa13.05□□□□□ -0.32
VSIG1-203ENST00000458383 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
VSIG1-203ENST00000458383 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
VSIG1-203ENST00000458383 KIF21BO75037 1637 aa13.02□□□□□ -0.32
VSIG1-203ENST00000458383 CUL7Q14999 1698 aa13.02□□□□□ -0.33
VSIG1-203ENST00000458383 SYNJ2O15056 1496 aa13□□□□□ -0.33
VSIG1-203ENST00000458383 CHMP7Q8WUX9 453 aaPredicted RBP12.99□□□□□ -0.33
VSIG1-203ENST00000458383 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
VSIG1-203ENST00000458383 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
VSIG1-203ENST00000458383 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
VSIG1-203ENST00000458383 GRIN2AQ12879 1464 aa12.95□□□□□ -0.34
VSIG1-203ENST00000458383 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
VSIG1-203ENST00000458383 LOC105371045A0A1W2PR82 267 aa12.93□□□□□ -0.34
VSIG1-203ENST00000458383 FBLN2P98095 1184 aa12.92□□□□□ -0.34
VSIG1-203ENST00000458383 NUP160Q12769 1436 aa12.91□□□□□ -0.34
VSIG1-203ENST00000458383 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms