RNA–Protein interactions for RNA: ENST00000458353.1

NUTF2P4-201, Transcript of nuclear transport factor 2 pseudogene 4, humanhuman

BASIC

Gene NUTF2P4, Length 381 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUTF2P4-201ENST00000458353 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
NUTF2P4-201ENST00000458353 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
NUTF2P4-201ENST00000458353 CHIC1Q5VXU3 224 aa17.42■□□□□ 0.38
NUTF2P4-201ENST00000458353 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
NUTF2P4-201ENST00000458353 ABCC9O60706 1549 aa16.64■□□□□ 0.25
NUTF2P4-201ENST00000458353 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
NUTF2P4-201ENST00000458353 NACADO15069 1562 aa16■□□□□ 0.15
NUTF2P4-201ENST00000458353 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
NUTF2P4-201ENST00000458353 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
NUTF2P4-201ENST00000458353 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
NUTF2P4-201ENST00000458353 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
NUTF2P4-201ENST00000458353 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
NUTF2P4-201ENST00000458353 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
NUTF2P4-201ENST00000458353 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
NUTF2P4-201ENST00000458353 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
NUTF2P4-201ENST00000458353 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
NUTF2P4-201ENST00000458353 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
NUTF2P4-201ENST00000458353 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
NUTF2P4-201ENST00000458353 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
NUTF2P4-201ENST00000458353 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
NUTF2P4-201ENST00000458353 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
NUTF2P4-201ENST00000458353 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
NUTF2P4-201ENST00000458353 BAZ1AQ9NRL2 1556 aaPredicted RBP14.89□□□□□ -0.03
NUTF2P4-201ENST00000458353 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
NUTF2P4-201ENST00000458353 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
NUTF2P4-201ENST00000458353 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
NUTF2P4-201ENST00000458353 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
NUTF2P4-201ENST00000458353 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
NUTF2P4-201ENST00000458353 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
NUTF2P4-201ENST00000458353 PEG3Q9GZU2 1588 aa14.69□□□□□ -0.06
NUTF2P4-201ENST00000458353 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
NUTF2P4-201ENST00000458353 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
NUTF2P4-201ENST00000458353 WIZO95785 1651 aa14.59□□□□□ -0.07
NUTF2P4-201ENST00000458353 FOXD1Q16676 465 aa14.57□□□□□ -0.08
NUTF2P4-201ENST00000458353 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
NUTF2P4-201ENST00000458353 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
NUTF2P4-201ENST00000458353 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
NUTF2P4-201ENST00000458353 NESP48681 1621 aa14.39□□□□□ -0.11
NUTF2P4-201ENST00000458353 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
NUTF2P4-201ENST00000458353 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
NUTF2P4-201ENST00000458353 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
NUTF2P4-201ENST00000458353 PDS5BQ9NTI5 1447 aa14.34□□□□□ -0.11
NUTF2P4-201ENST00000458353 CFTRP13569 1480 aa14.3□□□□□ -0.12
NUTF2P4-201ENST00000458353 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
NUTF2P4-201ENST00000458353 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
NUTF2P4-201ENST00000458353 CUX2O14529 1486 aa14.16□□□□□ -0.14
NUTF2P4-201ENST00000458353 MRC2Q9UBG0 1479 aa14.14□□□□□ -0.15
NUTF2P4-201ENST00000458353 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
NUTF2P4-201ENST00000458353 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
NUTF2P4-201ENST00000458353 WDR62O43379 1518 aa14.05□□□□□ -0.16
NUTF2P4-201ENST00000458353 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
NUTF2P4-201ENST00000458353 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
NUTF2P4-201ENST00000458353 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
NUTF2P4-201ENST00000458353 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
NUTF2P4-201ENST00000458353 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
NUTF2P4-201ENST00000458353 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
NUTF2P4-201ENST00000458353 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
NUTF2P4-201ENST00000458353 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
NUTF2P4-201ENST00000458353 CUX1P39880 1505 aa13.87□□□□□ -0.19
NUTF2P4-201ENST00000458353 SOGA1O94964 1423 aa13.86□□□□□ -0.19
NUTF2P4-201ENST00000458353 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
NUTF2P4-201ENST00000458353 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
NUTF2P4-201ENST00000458353 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
NUTF2P4-201ENST00000458353 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
NUTF2P4-201ENST00000458353 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
NUTF2P4-201ENST00000458353 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
NUTF2P4-201ENST00000458353 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.21
NUTF2P4-201ENST00000458353 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
NUTF2P4-201ENST00000458353 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
NUTF2P4-201ENST00000458353 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
NUTF2P4-201ENST00000458353 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.21
NUTF2P4-201ENST00000458353 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
NUTF2P4-201ENST00000458353 FBLN2P98095 1184 aa13.68□□□□□ -0.22
NUTF2P4-201ENST00000458353 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
NUTF2P4-201ENST00000458353 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
NUTF2P4-201ENST00000458353 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
NUTF2P4-201ENST00000458353 DNAJC5Q9H3Z4 198 aa13.67□□□□□ -0.22
NUTF2P4-201ENST00000458353 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
NUTF2P4-201ENST00000458353 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
NUTF2P4-201ENST00000458353 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
NUTF2P4-201ENST00000458353 MSH5O43196 834 aa13.63□□□□□ -0.23
NUTF2P4-201ENST00000458353 SNAPC4Q5SXM2 1469 aa13.62□□□□□ -0.23
NUTF2P4-201ENST00000458353 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
NUTF2P4-201ENST00000458353 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
NUTF2P4-201ENST00000458353 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
NUTF2P4-201ENST00000458353 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
NUTF2P4-201ENST00000458353 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
NUTF2P4-201ENST00000458353 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
NUTF2P4-201ENST00000458353 ADRA2BP18089 450 aa13.55□□□□□ -0.24
NUTF2P4-201ENST00000458353 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
NUTF2P4-201ENST00000458353 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
NUTF2P4-201ENST00000458353 IGF1RP08069 1367 aa13.53□□□□□ -0.24
NUTF2P4-201ENST00000458353 PBRM1Q86U86 1689 aa13.51□□□□□ -0.25
NUTF2P4-201ENST00000458353 ADAMTS12P58397 1594 aa13.47□□□□□ -0.25
NUTF2P4-201ENST00000458353 GRIN2AQ12879 1464 aa13.47□□□□□ -0.25
NUTF2P4-201ENST00000458353 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.25
NUTF2P4-201ENST00000458353 CHD1O14646 1710 aa13.45□□□□□ -0.26
NUTF2P4-201ENST00000458353 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
NUTF2P4-201ENST00000458353 NUP160Q12769 1436 aa13.4□□□□□ -0.26
NUTF2P4-201ENST00000458353 FAM9AQ8IZU1 332 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms