RNA–Protein interactions for RNA: ENST00000457939.1

COA1-214, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 3

Gene COA1, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-214ENST00000457939 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
COA1-214ENST00000457939 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
COA1-214ENST00000457939 ABCC9O60706 1549 aa22.31■■□□□ 1.16
COA1-214ENST00000457939 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
COA1-214ENST00000457939 NACADO15069 1562 aa21.53■■□□□ 1.04
COA1-214ENST00000457939 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
COA1-214ENST00000457939 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
COA1-214ENST00000457939 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
COA1-214ENST00000457939 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
COA1-214ENST00000457939 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
COA1-214ENST00000457939 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
COA1-214ENST00000457939 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
COA1-214ENST00000457939 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
COA1-214ENST00000457939 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
COA1-214ENST00000457939 DNAJC5BQ9UF47 199 aa20.43■□□□□ 0.86
COA1-214ENST00000457939 EIF4G1Q04637 1599 aaKnown RBP20.31■□□□□ 0.84
COA1-214ENST00000457939 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
COA1-214ENST00000457939 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
COA1-214ENST00000457939 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
COA1-214ENST00000457939 SMARCA4P51532 1647 aa20■□□□□ 0.79
COA1-214ENST00000457939 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
COA1-214ENST00000457939 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
COA1-214ENST00000457939 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
COA1-214ENST00000457939 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
COA1-214ENST00000457939 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
COA1-214ENST00000457939 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
COA1-214ENST00000457939 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
COA1-214ENST00000457939 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
COA1-214ENST00000457939 WIZO95785 1651 aa19.62■□□□□ 0.73
COA1-214ENST00000457939 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
COA1-214ENST00000457939 NESP48681 1621 aa19.34■□□□□ 0.69
COA1-214ENST00000457939 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
COA1-214ENST00000457939 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
COA1-214ENST00000457939 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
COA1-214ENST00000457939 CFTRP13569 1480 aa19.25■□□□□ 0.67
COA1-214ENST00000457939 SUPT5HO00267 1087 aaKnown RBP19.21■□□□□ 0.67
COA1-214ENST00000457939 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
COA1-214ENST00000457939 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
COA1-214ENST00000457939 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
COA1-214ENST00000457939 CUX2O14529 1486 aa19.03■□□□□ 0.64
COA1-214ENST00000457939 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
COA1-214ENST00000457939 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
COA1-214ENST00000457939 MRC2Q9UBG0 1479 aa19.01■□□□□ 0.63
COA1-214ENST00000457939 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
COA1-214ENST00000457939 WDR62O43379 1518 aa18.95■□□□□ 0.62
COA1-214ENST00000457939 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
COA1-214ENST00000457939 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
COA1-214ENST00000457939 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
COA1-214ENST00000457939 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
COA1-214ENST00000457939 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
COA1-214ENST00000457939 CUX1P39880 1505 aa18.68■□□□□ 0.58
COA1-214ENST00000457939 IFT140Q96RY7 1462 aa18.66■□□□□ 0.58
COA1-214ENST00000457939 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
COA1-214ENST00000457939 WRNQ14191 1432 aaPredicted RBP eCLIP18.6■□□□□ 0.57
COA1-214ENST00000457939 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
COA1-214ENST00000457939 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
COA1-214ENST00000457939 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
COA1-214ENST00000457939 SOGA1O94964 1423 aa18.54■□□□□ 0.56
COA1-214ENST00000457939 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
COA1-214ENST00000457939 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
COA1-214ENST00000457939 SYNJ1O43426 1573 aa18.52■□□□□ 0.56
COA1-214ENST00000457939 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
COA1-214ENST00000457939 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
COA1-214ENST00000457939 AQRO60306 1485 aaKnown RBP eCLIP18.45■□□□□ 0.54
COA1-214ENST00000457939 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
COA1-214ENST00000457939 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
COA1-214ENST00000457939 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
COA1-214ENST00000457939 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
COA1-214ENST00000457939 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.53
COA1-214ENST00000457939 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
COA1-214ENST00000457939 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
COA1-214ENST00000457939 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
COA1-214ENST00000457939 MAGI1Q96QZ7 1491 aaPredicted RBP18.28■□□□□ 0.52
COA1-214ENST00000457939 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
COA1-214ENST00000457939 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
COA1-214ENST00000457939 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
COA1-214ENST00000457939 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
COA1-214ENST00000457939 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
COA1-214ENST00000457939 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
COA1-214ENST00000457939 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
COA1-214ENST00000457939 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
COA1-214ENST00000457939 IGF1RP08069 1367 aa18.15■□□□□ 0.5
COA1-214ENST00000457939 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
COA1-214ENST00000457939 FBLN2P98095 1184 aa18.13■□□□□ 0.49
COA1-214ENST00000457939 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
COA1-214ENST00000457939 CHD1O14646 1710 aa18.08■□□□□ 0.48
COA1-214ENST00000457939 NUP160Q12769 1436 aa18.06■□□□□ 0.48
COA1-214ENST00000457939 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
COA1-214ENST00000457939 CLASP1Q7Z460 1538 aa18.04■□□□□ 0.48
COA1-214ENST00000457939 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
COA1-214ENST00000457939 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
COA1-214ENST00000457939 CUL7Q14999 1698 aa17.99■□□□□ 0.47
COA1-214ENST00000457939 CEP170Q5SW79 1584 aa17.97■□□□□ 0.47
COA1-214ENST00000457939 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
COA1-214ENST00000457939 EEA1Q15075 1411 aa17.93■□□□□ 0.46
COA1-214ENST00000457939 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
COA1-214ENST00000457939 RAPGEF2Q9Y4G8 1499 aa17.9■□□□□ 0.46
COA1-214ENST00000457939 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
COA1-214ENST00000457939 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
COA1-214ENST00000457939 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms