RNA–Protein interactions for RNA: ENST00000457932.5

NR1H3-214, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-214ENST00000457932 NISCHQ9Y2I1 1504 aa45.21■■■■■ 4.83
NR1H3-214ENST00000457932 CCDC180Q9P1Z9 1646 aa40.11■■■■■ 4.01
NR1H3-214ENST00000457932 ABCC9O60706 1549 aa38.71■■■■□ 3.79
NR1H3-214ENST00000457932 ZCCHC6Q5VYS8 1495 aaKnown RBP37.76■■■■□ 3.63
NR1H3-214ENST00000457932 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
NR1H3-214ENST00000457932 NACADO15069 1562 aa37.62■■■■□ 3.61
NR1H3-214ENST00000457932 DCAF1Q9Y4B6 1507 aa37.55■■■■□ 3.6
NR1H3-214ENST00000457932 RB1CC1Q8TDY2 1594 aa37.54■■■■□ 3.6
NR1H3-214ENST00000457932 DCAF8L2P0C7V8 631 aa37.36■■■■□ 3.57
NR1H3-214ENST00000457932 UNC13AQ9UPW8 1703 aa36.61■■■■□ 3.45
NR1H3-214ENST00000457932 SCRIBQ14160 1630 aa36.45■■■■□ 3.42
NR1H3-214ENST00000457932 BICRAQ9NZM4 1560 aa36.36■■■■□ 3.41
NR1H3-214ENST00000457932 SHROOM4Q9ULL8 1493 aa36.2■■■■□ 3.39
NR1H3-214ENST00000457932 PABPN1Q86U42 306 aaKnown RBP eCLIP36.17■■■■□ 3.38
NR1H3-214ENST00000457932 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
NR1H3-214ENST00000457932 DNAJC5BQ9UF47 199 aa35.19■■■■□ 3.22
NR1H3-214ENST00000457932 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
NR1H3-214ENST00000457932 CECR2Q9BXF3 1484 aa35.09■■■■□ 3.21
NR1H3-214ENST00000457932 BAZ1AQ9NRL2 1556 aaPredicted RBP35.04■■■■□ 3.2
NR1H3-214ENST00000457932 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
NR1H3-214ENST00000457932 MROH2BQ7Z745 1585 aa34.79■■■■□ 3.16
NR1H3-214ENST00000457932 PEG3Q9GZU2 1588 aa34.75■■■■□ 3.15
NR1H3-214ENST00000457932 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
NR1H3-214ENST00000457932 ATAD2BQ9ULI0 1458 aa34.72■■■■□ 3.15
NR1H3-214ENST00000457932 NCAPD3P42695 1498 aa34.71■■■■□ 3.15
NR1H3-214ENST00000457932 HMGXB3Q12766 1538 aa34.58■■■■□ 3.13
NR1H3-214ENST00000457932 RSF1Q96T23 1441 aaPredicted RBP34.54■■■■□ 3.12
NR1H3-214ENST00000457932 BAZ1BQ9UIG0 1483 aaKnown RBP34.43■■■■□ 3.1
NR1H3-214ENST00000457932 WIZO95785 1651 aa34.39■■■■□ 3.1
NR1H3-214ENST00000457932 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
NR1H3-214ENST00000457932 LAMC3Q9Y6N6 1575 aa33.72■■■□□ 2.99
NR1H3-214ENST00000457932 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
NR1H3-214ENST00000457932 CCDC88BA6NC98 1476 aa33.69■■■□□ 2.98
NR1H3-214ENST00000457932 CADPSQ9ULU8 1353 aa33.66■■■□□ 2.98
NR1H3-214ENST00000457932 NESP48681 1621 aa33.61■■■□□ 2.97
NR1H3-214ENST00000457932 CFTRP13569 1480 aa33.56■■■□□ 2.96
NR1H3-214ENST00000457932 PDS5BQ9NTI5 1447 aa33.45■■■□□ 2.95
NR1H3-214ENST00000457932 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
NR1H3-214ENST00000457932 PRDM2Q13029 1718 aa33.33■■■□□ 2.93
NR1H3-214ENST00000457932 KIF21AQ7Z4S6 1674 aa33.25■■■□□ 2.91
NR1H3-214ENST00000457932 FANCD2Q9BXW9 1451 aa33.25■■■□□ 2.91
NR1H3-214ENST00000457932 CEP164Q9UPV0 1460 aa33.18■■■□□ 2.9
NR1H3-214ENST00000457932 THOC2Q8NI27 1593 aaKnown RBP33.13■■■□□ 2.89
NR1H3-214ENST00000457932 MRC2Q9UBG0 1479 aa33.08■■■□□ 2.89
NR1H3-214ENST00000457932 CUX2O14529 1486 aa33.03■■■□□ 2.88
NR1H3-214ENST00000457932 WDR62O43379 1518 aa32.99■■■□□ 2.87
NR1H3-214ENST00000457932 URB2Q14146 1524 aaKnown RBP32.88■■■□□ 2.85
NR1H3-214ENST00000457932 ABCC8Q09428 1581 aa32.87■■■□□ 2.85
NR1H3-214ENST00000457932 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
NR1H3-214ENST00000457932 TOPBP1Q92547 1522 aa32.76■■■□□ 2.83
NR1H3-214ENST00000457932 CUX1P39880 1505 aa32.62■■■□□ 2.81
NR1H3-214ENST00000457932 WRNQ14191 1432 aaPredicted RBP eCLIP32.56■■■□□ 2.8
NR1H3-214ENST00000457932 POLA1P09884 1462 aaPredicted RBP32.51■■■□□ 2.79
NR1H3-214ENST00000457932 IFT140Q96RY7 1462 aa32.51■■■□□ 2.79
NR1H3-214ENST00000457932 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
NR1H3-214ENST00000457932 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
NR1H3-214ENST00000457932 FGD5Q6ZNL6 1462 aa32.45■■■□□ 2.79
NR1H3-214ENST00000457932 SYNJ1O43426 1573 aa32.42■■■□□ 2.78
NR1H3-214ENST00000457932 TARBP1Q13395 1621 aaKnown RBP32.4■■■□□ 2.78
NR1H3-214ENST00000457932 SOGA1O94964 1423 aa32.35■■■□□ 2.77
NR1H3-214ENST00000457932 WDR97A6NE52 1622 aa32.29■■■□□ 2.76
NR1H3-214ENST00000457932 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
NR1H3-214ENST00000457932 ABCA10Q8WWZ4 1543 aa32.23■■■□□ 2.75
NR1H3-214ENST00000457932 ZNF608Q9ULD9 1512 aaPredicted RBP32.23■■■□□ 2.75
NR1H3-214ENST00000457932 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
NR1H3-214ENST00000457932 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.737e-8■■■■□ 25.8
NR1H3-214ENST00000457932 TDRD9Q8NDG6 1382 aaKnown RBP32.07■■■□□ 2.73
NR1H3-214ENST00000457932 ABCA5Q8WWZ7 1642 aa32.05■■■□□ 2.72
NR1H3-214ENST00000457932 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.71
NR1H3-214ENST00000457932 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
NR1H3-214ENST00000457932 TRIM41Q8WV44 630 aa31.93■■■□□ 2.7
NR1H3-214ENST00000457932 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
NR1H3-214ENST00000457932 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
NR1H3-214ENST00000457932 KIF27Q86VH2 1401 aa31.87■■■□□ 2.69
NR1H3-214ENST00000457932 ERICH3Q5RHP9 1530 aa31.86■■■□□ 2.69
NR1H3-214ENST00000457932 SNAPC4Q5SXM2 1469 aa31.84■■■□□ 2.69
NR1H3-214ENST00000457932 CHIC1Q5VXU3 224 aa31.78■■■□□ 2.68
NR1H3-214ENST00000457932 SYNJ2O15056 1496 aa31.74■■■□□ 2.67
NR1H3-214ENST00000457932 ADAMTS12P58397 1594 aa31.71■■■□□ 2.67
NR1H3-214ENST00000457932 FHAD1B1AJZ9 1412 aa31.68■■■□□ 2.66
NR1H3-214ENST00000457932 IGF1RP08069 1367 aa31.68■■■□□ 2.66
NR1H3-214ENST00000457932 CHD1O14646 1710 aa31.66■■■□□ 2.66
NR1H3-214ENST00000457932 CUL7Q14999 1698 aa31.63■■■□□ 2.65
NR1H3-214ENST00000457932 OSCARQ8IYS5 282 aa31.62■■■□□ 2.65
NR1H3-214ENST00000457932 CHMP7Q8WUX9 453 aaPredicted RBP31.6■■■□□ 2.65
NR1H3-214ENST00000457932 EEA1Q15075 1411 aa31.57■■■□□ 2.64
NR1H3-214ENST00000457932 RUSC2Q8N2Y8 1516 aa31.56■■■□□ 2.64
NR1H3-214ENST00000457932 GRIN2AQ12879 1464 aa31.56■■■□□ 2.64
NR1H3-214ENST00000457932 FBLN2P98095 1184 aa31.53■■■□□ 2.64
NR1H3-214ENST00000457932 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
NR1H3-214ENST00000457932 CARMIL1Q5VZK9 1371 aa31.48■■■□□ 2.63
NR1H3-214ENST00000457932 NUP160Q12769 1436 aa31.45■■■□□ 2.63
NR1H3-214ENST00000457932 CLASP1Q7Z460 1538 aa31.41■■■□□ 2.62
NR1H3-214ENST00000457932 PRXQ9BXM0 1461 aa31.37■■■□□ 2.61
NR1H3-214ENST00000457932 CEP170Q5SW79 1584 aa31.36■■■□□ 2.61
NR1H3-214ENST00000457932 RAPGEF2Q9Y4G8 1499 aa31.36■■■□□ 2.61
NR1H3-214ENST00000457932 CSRNP3Q8WYN3 585 aa31.34■■■□□ 2.61
NR1H3-214ENST00000457932 KIAA0586Q9BVV6 1533 aa31.22■■■□□ 2.59
NR1H3-214ENST00000457932 SHROOM2Q13796 1616 aa31.17■■■□□ 2.58
NR1H3-214ENST00000457932 KIF21BO75037 1637 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms