RNA–Protein interactions for RNA: ENST00000457146.5

LRRC23-212, Transcript of leucine rich repeat containing 23, humanhuman

TSL 4

Gene LRRC23, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-212ENST00000457146 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
LRRC23-212ENST00000457146 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
LRRC23-212ENST00000457146 ABCC9O60706 1549 aa14.96□□□□□ -0.02
LRRC23-212ENST00000457146 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
LRRC23-212ENST00000457146 DCAF8L2P0C7V8 631 aa14.71□□□□□ -0.05
LRRC23-212ENST00000457146 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
LRRC23-212ENST00000457146 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
LRRC23-212ENST00000457146 NACADO15069 1562 aa14.58□□□□□ -0.08
LRRC23-212ENST00000457146 RB1CC1Q8TDY2 1594 aa14.51□□□□□ -0.09
LRRC23-212ENST00000457146 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
LRRC23-212ENST00000457146 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
LRRC23-212ENST00000457146 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
LRRC23-212ENST00000457146 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
LRRC23-212ENST00000457146 BICRAQ9NZM4 1560 aa14.04□□□□□ -0.16
LRRC23-212ENST00000457146 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
LRRC23-212ENST00000457146 BAZ1AQ9NRL2 1556 aaPredicted RBP13.7□□□□□ -0.22
LRRC23-212ENST00000457146 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
LRRC23-212ENST00000457146 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
LRRC23-212ENST00000457146 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
LRRC23-212ENST00000457146 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
LRRC23-212ENST00000457146 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
LRRC23-212ENST00000457146 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
LRRC23-212ENST00000457146 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
LRRC23-212ENST00000457146 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
LRRC23-212ENST00000457146 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
LRRC23-212ENST00000457146 WIZO95785 1651 aa13.5□□□□□ -0.25
LRRC23-212ENST00000457146 PEG3Q9GZU2 1588 aa13.5□□□□□ -0.25
LRRC23-212ENST00000457146 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
LRRC23-212ENST00000457146 BAZ1BQ9UIG0 1483 aaKnown RBP13.43□□□□□ -0.26
LRRC23-212ENST00000457146 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
LRRC23-212ENST00000457146 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
LRRC23-212ENST00000457146 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
LRRC23-212ENST00000457146 CCDC88BA6NC98 1476 aa13.24□□□□□ -0.29
LRRC23-212ENST00000457146 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
LRRC23-212ENST00000457146 CFTRP13569 1480 aa13.06□□□□□ -0.32
LRRC23-212ENST00000457146 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
LRRC23-212ENST00000457146 NESP48681 1621 aa13.02□□□□□ -0.32
LRRC23-212ENST00000457146 PRDM2Q13029 1718 aa12.97□□□□□ -0.33
LRRC23-212ENST00000457146 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
LRRC23-212ENST00000457146 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
LRRC23-212ENST00000457146 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
LRRC23-212ENST00000457146 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
LRRC23-212ENST00000457146 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
LRRC23-212ENST00000457146 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
LRRC23-212ENST00000457146 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
LRRC23-212ENST00000457146 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
LRRC23-212ENST00000457146 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
LRRC23-212ENST00000457146 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
LRRC23-212ENST00000457146 CUX1P39880 1505 aa12.78□□□□□ -0.36
LRRC23-212ENST00000457146 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
LRRC23-212ENST00000457146 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.36
LRRC23-212ENST00000457146 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
LRRC23-212ENST00000457146 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
LRRC23-212ENST00000457146 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
LRRC23-212ENST00000457146 TOP2BQ02880 1626 aa12.75□□□□□ -0.37
LRRC23-212ENST00000457146 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
LRRC23-212ENST00000457146 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
LRRC23-212ENST00000457146 WDR62O43379 1518 aa12.73□□□□□ -0.37
LRRC23-212ENST00000457146 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
LRRC23-212ENST00000457146 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
LRRC23-212ENST00000457146 SOGA1O94964 1423 aa12.64□□□□□ -0.39
LRRC23-212ENST00000457146 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
LRRC23-212ENST00000457146 CUX2O14529 1486 aa12.61□□□□□ -0.39
LRRC23-212ENST00000457146 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
LRRC23-212ENST00000457146 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.4
LRRC23-212ENST00000457146 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
LRRC23-212ENST00000457146 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
LRRC23-212ENST00000457146 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
LRRC23-212ENST00000457146 TDRD9Q8NDG6 1382 aaKnown RBP12.54□□□□□ -0.4
LRRC23-212ENST00000457146 EEA1Q15075 1411 aa12.53□□□□□ -0.4
LRRC23-212ENST00000457146 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
LRRC23-212ENST00000457146 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
LRRC23-212ENST00000457146 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
LRRC23-212ENST00000457146 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRRC23-212ENST00000457146 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
LRRC23-212ENST00000457146 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
LRRC23-212ENST00000457146 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
LRRC23-212ENST00000457146 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
LRRC23-212ENST00000457146 GRIN2BQ13224 1484 aa12.45□□□□□ -0.42
LRRC23-212ENST00000457146 IGF1RP08069 1367 aa12.44□□□□□ -0.42
LRRC23-212ENST00000457146 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
LRRC23-212ENST00000457146 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
LRRC23-212ENST00000457146 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
LRRC23-212ENST00000457146 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
LRRC23-212ENST00000457146 CUL7Q14999 1698 aa12.38□□□□□ -0.43
LRRC23-212ENST00000457146 MAGI1Q96QZ7 1491 aaPredicted RBP12.38□□□□□ -0.43
LRRC23-212ENST00000457146 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
LRRC23-212ENST00000457146 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
LRRC23-212ENST00000457146 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
LRRC23-212ENST00000457146 RAPGEF2Q9Y4G8 1499 aa12.35□□□□□ -0.43
LRRC23-212ENST00000457146 KIF21BO75037 1637 aa12.35□□□□□ -0.43
LRRC23-212ENST00000457146 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
LRRC23-212ENST00000457146 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
LRRC23-212ENST00000457146 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
LRRC23-212ENST00000457146 GOLGA3Q08378 1498 aa12.33□□□□□ -0.44
LRRC23-212ENST00000457146 FBLN2P98095 1184 aa12.32□□□□□ -0.44
LRRC23-212ENST00000457146 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
LRRC23-212ENST00000457146 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
LRRC23-212ENST00000457146 GRIN2AQ12879 1464 aa12.28□□□□□ -0.44
LRRC23-212ENST00000457146 CHD1O14646 1710 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms