RNA–Protein interactions for RNA: ENST00000456540.1

GPANK1-207, Transcript of G-patch domain and ankyrin repeats 1, humanhuman

TSL 3

Gene GPANK1, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPANK1-207ENST00000456540 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
GPANK1-207ENST00000456540 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
GPANK1-207ENST00000456540 ABCC9O60706 1549 aa16.2■□□□□ 0.18
GPANK1-207ENST00000456540 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
GPANK1-207ENST00000456540 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
GPANK1-207ENST00000456540 NACADO15069 1562 aa15.63■□□□□ 0.09
GPANK1-207ENST00000456540 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
GPANK1-207ENST00000456540 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
GPANK1-207ENST00000456540 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
GPANK1-207ENST00000456540 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
GPANK1-207ENST00000456540 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
GPANK1-207ENST00000456540 BICRAQ9NZM4 1560 aa15.22■□□□□ 0.03
GPANK1-207ENST00000456540 SHROOM4Q9ULL8 1493 aa15.15■□□□□ 0.02
GPANK1-207ENST00000456540 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
GPANK1-207ENST00000456540 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
GPANK1-207ENST00000456540 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.04
GPANK1-207ENST00000456540 CECR2Q9BXF3 1484 aa14.75□□□□□ -0.05
GPANK1-207ENST00000456540 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
GPANK1-207ENST00000456540 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
GPANK1-207ENST00000456540 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
GPANK1-207ENST00000456540 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
GPANK1-207ENST00000456540 WIZO95785 1651 aa14.54□□□□□ -0.08
GPANK1-207ENST00000456540 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
GPANK1-207ENST00000456540 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
GPANK1-207ENST00000456540 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
GPANK1-207ENST00000456540 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
GPANK1-207ENST00000456540 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
GPANK1-207ENST00000456540 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
GPANK1-207ENST00000456540 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
GPANK1-207ENST00000456540 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
GPANK1-207ENST00000456540 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.13
GPANK1-207ENST00000456540 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
GPANK1-207ENST00000456540 NESP48681 1621 aa14.11□□□□□ -0.15
GPANK1-207ENST00000456540 DNAJC5Q9H3Z4 198 aa14.08□□□□□ -0.16
GPANK1-207ENST00000456540 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
GPANK1-207ENST00000456540 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
GPANK1-207ENST00000456540 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
GPANK1-207ENST00000456540 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
GPANK1-207ENST00000456540 CFTRP13569 1480 aa13.97□□□□□ -0.17
GPANK1-207ENST00000456540 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
GPANK1-207ENST00000456540 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
GPANK1-207ENST00000456540 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
GPANK1-207ENST00000456540 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
GPANK1-207ENST00000456540 CEP164Q9UPV0 1460 aa13.85□□□□□ -0.19
GPANK1-207ENST00000456540 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
GPANK1-207ENST00000456540 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
GPANK1-207ENST00000456540 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
GPANK1-207ENST00000456540 WDR62O43379 1518 aa13.75□□□□□ -0.21
GPANK1-207ENST00000456540 DNMBPQ6XZF7 1577 aa13.72□□□□□ -0.21
GPANK1-207ENST00000456540 CUX1P39880 1505 aa13.72□□□□□ -0.21
GPANK1-207ENST00000456540 SYNJ1O43426 1573 aa13.71□□□□□ -0.22
GPANK1-207ENST00000456540 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
GPANK1-207ENST00000456540 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
GPANK1-207ENST00000456540 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
GPANK1-207ENST00000456540 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
GPANK1-207ENST00000456540 CUX2O14529 1486 aa13.63□□□□□ -0.23
GPANK1-207ENST00000456540 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
GPANK1-207ENST00000456540 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
GPANK1-207ENST00000456540 WDR97A6NE52 1622 aa13.59□□□□□ -0.23
GPANK1-207ENST00000456540 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
GPANK1-207ENST00000456540 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
GPANK1-207ENST00000456540 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
GPANK1-207ENST00000456540 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
GPANK1-207ENST00000456540 IFT140Q96RY7 1462 aa13.51□□□□□ -0.25
GPANK1-207ENST00000456540 SOGA1O94964 1423 aa13.48□□□□□ -0.25
GPANK1-207ENST00000456540 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
GPANK1-207ENST00000456540 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.25
GPANK1-207ENST00000456540 AEBP2Q6ZN18 517 aaPredicted RBP13.46□□□□□ -0.25
GPANK1-207ENST00000456540 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
GPANK1-207ENST00000456540 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
GPANK1-207ENST00000456540 CHIC1Q5VXU3 224 aa13.41□□□□□ -0.26
GPANK1-207ENST00000456540 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
GPANK1-207ENST00000456540 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
GPANK1-207ENST00000456540 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
GPANK1-207ENST00000456540 CHD1O14646 1710 aa13.36□□□□□ -0.27
GPANK1-207ENST00000456540 RUSC2Q8N2Y8 1516 aa13.36□□□□□ -0.27
GPANK1-207ENST00000456540 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
GPANK1-207ENST00000456540 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
GPANK1-207ENST00000456540 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
GPANK1-207ENST00000456540 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
GPANK1-207ENST00000456540 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
GPANK1-207ENST00000456540 CUL7Q14999 1698 aa13.28□□□□□ -0.28
GPANK1-207ENST00000456540 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
GPANK1-207ENST00000456540 FAM9AQ8IZU1 332 aaPredicted RBP13.22□□□□□ -0.29
GPANK1-207ENST00000456540 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
GPANK1-207ENST00000456540 IGF1RP08069 1367 aa13.2□□□□□ -0.3
GPANK1-207ENST00000456540 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
GPANK1-207ENST00000456540 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
GPANK1-207ENST00000456540 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
GPANK1-207ENST00000456540 FBLN2P98095 1184 aa13.17□□□□□ -0.3
GPANK1-207ENST00000456540 EEA1Q15075 1411 aa13.15□□□□□ -0.3
GPANK1-207ENST00000456540 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
GPANK1-207ENST00000456540 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
GPANK1-207ENST00000456540 KIF21BO75037 1637 aa13.13□□□□□ -0.31
GPANK1-207ENST00000456540 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
GPANK1-207ENST00000456540 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
GPANK1-207ENST00000456540 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
GPANK1-207ENST00000456540 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
GPANK1-207ENST00000456540 NUP160Q12769 1436 aa13.09□□□□□ -0.31
GPANK1-207ENST00000456540 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms