RNA–Protein interactions for RNA: ENST00000455802.5

CCDC197-204, Transcript of coiled-coil domain containing 197, humanhuman

TSL 5

Gene CCDC197, Length 427 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-204ENST00000455802 NISCHQ9Y2I1 1504 aa30.49■■■□□ 2.47
CCDC197-204ENST00000455802 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
CCDC197-204ENST00000455802 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
CCDC197-204ENST00000455802 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
CCDC197-204ENST00000455802 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
CCDC197-204ENST00000455802 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
CCDC197-204ENST00000455802 ABCC9O60706 1549 aa25.02■■□□□ 1.6
CCDC197-204ENST00000455802 NACADO15069 1562 aa24.85■■□□□ 1.57
CCDC197-204ENST00000455802 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
CCDC197-204ENST00000455802 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
CCDC197-204ENST00000455802 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
CCDC197-204ENST00000455802 UNC13AQ9UPW8 1703 aa23.94■■□□□ 1.42
CCDC197-204ENST00000455802 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
CCDC197-204ENST00000455802 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
CCDC197-204ENST00000455802 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
CCDC197-204ENST00000455802 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
CCDC197-204ENST00000455802 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
CCDC197-204ENST00000455802 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCDC197-204ENST00000455802 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
CCDC197-204ENST00000455802 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
CCDC197-204ENST00000455802 WIZO95785 1651 aa23.25■■□□□ 1.31
CCDC197-204ENST00000455802 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
CCDC197-204ENST00000455802 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
CCDC197-204ENST00000455802 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
CCDC197-204ENST00000455802 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
CCDC197-204ENST00000455802 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
CCDC197-204ENST00000455802 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
CCDC197-204ENST00000455802 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
CCDC197-204ENST00000455802 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
CCDC197-204ENST00000455802 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
CCDC197-204ENST00000455802 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
CCDC197-204ENST00000455802 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
CCDC197-204ENST00000455802 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
CCDC197-204ENST00000455802 CFTRP13569 1480 aa22.38■■□□□ 1.17
CCDC197-204ENST00000455802 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
CCDC197-204ENST00000455802 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
CCDC197-204ENST00000455802 PRDM2Q13029 1718 aa22.25■■□□□ 1.15
CCDC197-204ENST00000455802 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
CCDC197-204ENST00000455802 LAMC3Q9Y6N6 1575 aa22.14■■□□□ 1.13
CCDC197-204ENST00000455802 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
CCDC197-204ENST00000455802 EEA1Q15075 1411 aa22.08■■□□□ 1.13
CCDC197-204ENST00000455802 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
CCDC197-204ENST00000455802 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
CCDC197-204ENST00000455802 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
CCDC197-204ENST00000455802 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
CCDC197-204ENST00000455802 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
CCDC197-204ENST00000455802 CUX1P39880 1505 aa21.96■■□□□ 1.11
CCDC197-204ENST00000455802 NESP48681 1621 aa21.93■■□□□ 1.1
CCDC197-204ENST00000455802 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
CCDC197-204ENST00000455802 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
CCDC197-204ENST00000455802 SOGA1O94964 1423 aa21.88■■□□□ 1.09
CCDC197-204ENST00000455802 LOC105371045A0A1W2PR82 267 aa21.86■■□□□ 1.09
CCDC197-204ENST00000455802 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
CCDC197-204ENST00000455802 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
CCDC197-204ENST00000455802 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
CCDC197-204ENST00000455802 KIF27Q86VH2 1401 aa21.75■■□□□ 1.07
CCDC197-204ENST00000455802 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
CCDC197-204ENST00000455802 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
CCDC197-204ENST00000455802 KIF21AQ7Z4S6 1674 aa21.7■■□□□ 1.06
CCDC197-204ENST00000455802 URB2Q14146 1524 aaKnown RBP21.68■■□□□ 1.06
CCDC197-204ENST00000455802 KIF21BO75037 1637 aa21.68■■□□□ 1.06
CCDC197-204ENST00000455802 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
CCDC197-204ENST00000455802 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.06
CCDC197-204ENST00000455802 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
CCDC197-204ENST00000455802 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
CCDC197-204ENST00000455802 ABCA10Q8WWZ4 1543 aa21.62■■□□□ 1.05
CCDC197-204ENST00000455802 CUX2O14529 1486 aa21.6■■□□□ 1.05
CCDC197-204ENST00000455802 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
CCDC197-204ENST00000455802 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
CCDC197-204ENST00000455802 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
CCDC197-204ENST00000455802 WDR62O43379 1518 aa21.53■■□□□ 1.04
CCDC197-204ENST00000455802 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
CCDC197-204ENST00000455802 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
CCDC197-204ENST00000455802 IGF1RP08069 1367 aa21.5■■□□□ 1.03
CCDC197-204ENST00000455802 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
CCDC197-204ENST00000455802 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
CCDC197-204ENST00000455802 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.03
CCDC197-204ENST00000455802 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
CCDC197-204ENST00000455802 CARMIL1Q5VZK9 1371 aa21.42■■□□□ 1.02
CCDC197-204ENST00000455802 IFT140Q96RY7 1462 aa21.42■■□□□ 1.02
CCDC197-204ENST00000455802 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
CCDC197-204ENST00000455802 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
CCDC197-204ENST00000455802 CUL7Q14999 1698 aa21.39■■□□□ 1.01
CCDC197-204ENST00000455802 ABCA5Q8WWZ7 1642 aa21.39■■□□□ 1.01
CCDC197-204ENST00000455802 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
CCDC197-204ENST00000455802 TDRD9Q8NDG6 1382 aaKnown RBP21.32■■□□□ 1
CCDC197-204ENST00000455802 CLIP1P30622 1438 aa21.28■■□□□ 1
CCDC197-204ENST00000455802 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
CCDC197-204ENST00000455802 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
CCDC197-204ENST00000455802 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
CCDC197-204ENST00000455802 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.98
CCDC197-204ENST00000455802 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
CCDC197-204ENST00000455802 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
CCDC197-204ENST00000455802 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
CCDC197-204ENST00000455802 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
CCDC197-204ENST00000455802 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.97
CCDC197-204ENST00000455802 CTTNBP2Q8WZ74 1663 aa21.08■□□□□ 0.96
CCDC197-204ENST00000455802 TRIM26Q12899 539 aaPredicted RBP21.05■□□□□ 0.96
CCDC197-204ENST00000455802 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
CCDC197-204ENST00000455802 ARHGAP35Q9NRY4 1499 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms