RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
VSIG4-204ENST00000455586 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
VSIG4-204ENST00000455586 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
VSIG4-204ENST00000455586 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
VSIG4-204ENST00000455586 SHROOM4Q9ULL8 1493 aa17.21■□□□□ 0.35
VSIG4-204ENST00000455586 ABCC9O60706 1549 aa17.18■□□□□ 0.34
VSIG4-204ENST00000455586 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
VSIG4-204ENST00000455586 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
VSIG4-204ENST00000455586 NACADO15069 1562 aa16.69■□□□□ 0.26
VSIG4-204ENST00000455586 SCRIBQ14160 1630 aa16.68■□□□□ 0.26
VSIG4-204ENST00000455586 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
VSIG4-204ENST00000455586 SUPT5HO00267 1087 aaKnown RBP16.56■□□□□ 0.24
VSIG4-204ENST00000455586 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
VSIG4-204ENST00000455586 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
VSIG4-204ENST00000455586 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
VSIG4-204ENST00000455586 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
VSIG4-204ENST00000455586 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
VSIG4-204ENST00000455586 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
VSIG4-204ENST00000455586 WIZO95785 1651 aa15.94■□□□□ 0.14
VSIG4-204ENST00000455586 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
VSIG4-204ENST00000455586 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
VSIG4-204ENST00000455586 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
VSIG4-204ENST00000455586 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
VSIG4-204ENST00000455586 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
VSIG4-204ENST00000455586 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
VSIG4-204ENST00000455586 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
VSIG4-204ENST00000455586 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
VSIG4-204ENST00000455586 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
VSIG4-204ENST00000455586 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
VSIG4-204ENST00000455586 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
VSIG4-204ENST00000455586 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
VSIG4-204ENST00000455586 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
VSIG4-204ENST00000455586 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
VSIG4-204ENST00000455586 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
VSIG4-204ENST00000455586 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
VSIG4-204ENST00000455586 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
VSIG4-204ENST00000455586 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
VSIG4-204ENST00000455586 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
VSIG4-204ENST00000455586 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
VSIG4-204ENST00000455586 CFTRP13569 1480 aa15.15■□□□□ 0.02
VSIG4-204ENST00000455586 CADPSQ9ULU8 1353 aa15.12■□□□□ 0.01
VSIG4-204ENST00000455586 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
VSIG4-204ENST00000455586 NESP48681 1621 aa15.11■□□□□ 0.01
VSIG4-204ENST00000455586 SOGA1O94964 1423 aa15.1■□□□□ 0.01
VSIG4-204ENST00000455586 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
VSIG4-204ENST00000455586 CUX1P39880 1505 aa15□□□□□ -0.01
VSIG4-204ENST00000455586 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
VSIG4-204ENST00000455586 TOP2BQ02880 1626 aa14.97□□□□□ -0.01
VSIG4-204ENST00000455586 EEA1Q15075 1411 aa14.95□□□□□ -0.02
VSIG4-204ENST00000455586 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
VSIG4-204ENST00000455586 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
VSIG4-204ENST00000455586 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
VSIG4-204ENST00000455586 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
VSIG4-204ENST00000455586 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
VSIG4-204ENST00000455586 FGD5Q6ZNL6 1462 aa14.83□□□□□ -0.04
VSIG4-204ENST00000455586 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
VSIG4-204ENST00000455586 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
VSIG4-204ENST00000455586 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
VSIG4-204ENST00000455586 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
VSIG4-204ENST00000455586 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
VSIG4-204ENST00000455586 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
VSIG4-204ENST00000455586 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
VSIG4-204ENST00000455586 CUX2O14529 1486 aa14.77□□□□□ -0.05
VSIG4-204ENST00000455586 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
VSIG4-204ENST00000455586 KIF21BO75037 1637 aa14.76□□□□□ -0.05
VSIG4-204ENST00000455586 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
VSIG4-204ENST00000455586 POLA1P09884 1462 aaPredicted RBP14.75□□□□□ -0.05
VSIG4-204ENST00000455586 KIF27Q86VH2 1401 aa14.75□□□□□ -0.05
VSIG4-204ENST00000455586 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
VSIG4-204ENST00000455586 TNIKQ9UKE5 1360 aa14.74□□□□□ -0.05
VSIG4-204ENST00000455586 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
VSIG4-204ENST00000455586 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
VSIG4-204ENST00000455586 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
VSIG4-204ENST00000455586 IGF1RP08069 1367 aa14.68□□□□□ -0.06
VSIG4-204ENST00000455586 TRIM26Q12899 539 aaPredicted RBP14.67□□□□□ -0.06
VSIG4-204ENST00000455586 TDRD9Q8NDG6 1382 aaKnown RBP14.67□□□□□ -0.06
VSIG4-204ENST00000455586 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
VSIG4-204ENST00000455586 PRXQ9BXM0 1461 aa14.65□□□□□ -0.06
VSIG4-204ENST00000455586 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
VSIG4-204ENST00000455586 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
VSIG4-204ENST00000455586 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
VSIG4-204ENST00000455586 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
VSIG4-204ENST00000455586 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
VSIG4-204ENST00000455586 AQRO60306 1485 aaKnown RBP eCLIP14.55□□□□□ -0.08
VSIG4-204ENST00000455586 CLIP1P30622 1438 aa14.55□□□□□ -0.08
VSIG4-204ENST00000455586 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
VSIG4-204ENST00000455586 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
VSIG4-204ENST00000455586 WDR62O43379 1518 aa14.53□□□□□ -0.08
VSIG4-204ENST00000455586 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
VSIG4-204ENST00000455586 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.08
VSIG4-204ENST00000455586 HRCP23327 699 aa14.52□□□□□ -0.08
VSIG4-204ENST00000455586 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
VSIG4-204ENST00000455586 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
VSIG4-204ENST00000455586 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
VSIG4-204ENST00000455586 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
VSIG4-204ENST00000455586 VPS8Q8N3P4 1428 aa14.43□□□□□ -0.1
VSIG4-204ENST00000455586 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
VSIG4-204ENST00000455586 CUL7Q14999 1698 aa14.4□□□□□ -0.1
VSIG4-204ENST00000455586 ARHGAP35Q9NRY4 1499 aa14.39□□□□□ -0.11
VSIG4-204ENST00000455586 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms