RNA–Protein interactions for RNA: ENST00000455541.1

AC016700.3-201, humanhuman

TSL 3 BASIC

Gene AC016700.3, Length 448 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016700.3-201ENST00000455541 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
AC016700.3-201ENST00000455541 ABCC9O60706 1549 aa23.23■■□□□ 1.31
AC016700.3-201ENST00000455541 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
AC016700.3-201ENST00000455541 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
AC016700.3-201ENST00000455541 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
AC016700.3-201ENST00000455541 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
AC016700.3-201ENST00000455541 NACADO15069 1562 aa21.53■■□□□ 1.04
AC016700.3-201ENST00000455541 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
AC016700.3-201ENST00000455541 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
AC016700.3-201ENST00000455541 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
AC016700.3-201ENST00000455541 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
AC016700.3-201ENST00000455541 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
AC016700.3-201ENST00000455541 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
AC016700.3-201ENST00000455541 SHROOM4Q9ULL8 1493 aa20.85■□□□□ 0.93
AC016700.3-201ENST00000455541 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
AC016700.3-201ENST00000455541 EIF4G1Q04637 1599 aaKnown RBP20.75■□□□□ 0.91
AC016700.3-201ENST00000455541 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
AC016700.3-201ENST00000455541 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
AC016700.3-201ENST00000455541 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
AC016700.3-201ENST00000455541 CUX2O14529 1486 aa20.19■□□□□ 0.82
AC016700.3-201ENST00000455541 ERCC6Q03468 1493 aa20.06■□□□□ 0.8
AC016700.3-201ENST00000455541 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
AC016700.3-201ENST00000455541 NESP48681 1621 aa19.82■□□□□ 0.76
AC016700.3-201ENST00000455541 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
AC016700.3-201ENST00000455541 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
AC016700.3-201ENST00000455541 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
AC016700.3-201ENST00000455541 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
AC016700.3-201ENST00000455541 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
AC016700.3-201ENST00000455541 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
AC016700.3-201ENST00000455541 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
AC016700.3-201ENST00000455541 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
AC016700.3-201ENST00000455541 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
AC016700.3-201ENST00000455541 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
AC016700.3-201ENST00000455541 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
AC016700.3-201ENST00000455541 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
AC016700.3-201ENST00000455541 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
AC016700.3-201ENST00000455541 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
AC016700.3-201ENST00000455541 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
AC016700.3-201ENST00000455541 WDR62O43379 1518 aa19.3■□□□□ 0.68
AC016700.3-201ENST00000455541 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
AC016700.3-201ENST00000455541 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
AC016700.3-201ENST00000455541 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
AC016700.3-201ENST00000455541 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
AC016700.3-201ENST00000455541 WIZO95785 1651 aa19.01■□□□□ 0.63
AC016700.3-201ENST00000455541 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
AC016700.3-201ENST00000455541 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
AC016700.3-201ENST00000455541 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
AC016700.3-201ENST00000455541 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
AC016700.3-201ENST00000455541 CFTRP13569 1480 aa18.97■□□□□ 0.63
AC016700.3-201ENST00000455541 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
AC016700.3-201ENST00000455541 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
AC016700.3-201ENST00000455541 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
AC016700.3-201ENST00000455541 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
AC016700.3-201ENST00000455541 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
AC016700.3-201ENST00000455541 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
AC016700.3-201ENST00000455541 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
AC016700.3-201ENST00000455541 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
AC016700.3-201ENST00000455541 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
AC016700.3-201ENST00000455541 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
AC016700.3-201ENST00000455541 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
AC016700.3-201ENST00000455541 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
AC016700.3-201ENST00000455541 CHD1O14646 1710 aa18.57■□□□□ 0.56
AC016700.3-201ENST00000455541 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
AC016700.3-201ENST00000455541 FBLN2P98095 1184 aa18.56■□□□□ 0.56
AC016700.3-201ENST00000455541 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
AC016700.3-201ENST00000455541 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
AC016700.3-201ENST00000455541 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
AC016700.3-201ENST00000455541 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
AC016700.3-201ENST00000455541 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
AC016700.3-201ENST00000455541 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
AC016700.3-201ENST00000455541 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
AC016700.3-201ENST00000455541 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
AC016700.3-201ENST00000455541 SOGA1O94964 1423 aa18.34■□□□□ 0.53
AC016700.3-201ENST00000455541 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.52
AC016700.3-201ENST00000455541 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
AC016700.3-201ENST00000455541 MAGI1Q96QZ7 1491 aaPredicted RBP18.28■□□□□ 0.52
AC016700.3-201ENST00000455541 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
AC016700.3-201ENST00000455541 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
AC016700.3-201ENST00000455541 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
AC016700.3-201ENST00000455541 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
AC016700.3-201ENST00000455541 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
AC016700.3-201ENST00000455541 CUX1P39880 1505 aa18.17■□□□□ 0.5
AC016700.3-201ENST00000455541 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
AC016700.3-201ENST00000455541 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
AC016700.3-201ENST00000455541 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 NUP160Q12769 1436 aa17.98■□□□□ 0.47
AC016700.3-201ENST00000455541 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
AC016700.3-201ENST00000455541 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
AC016700.3-201ENST00000455541 SHROOM2Q13796 1616 aa17.92■□□□□ 0.46
AC016700.3-201ENST00000455541 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 ABCC10Q5T3U5 1492 aa17.85■□□□□ 0.45
AC016700.3-201ENST00000455541 PRG4Q92954 1404 aaPredicted RBP17.85■□□□□ 0.45
AC016700.3-201ENST00000455541 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
AC016700.3-201ENST00000455541 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms