RNA–Protein interactions for RNA: ENST00000455071.1

LINC02535-201, Transcript of long intergenic non-protein coding RNA 2535, humanhuman

TSL 2 BASIC

Gene LINC02535, Length 2,513 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02535-201ENST00000455071 NISCHQ9Y2I1 1504 aa16.37■□□□□ 0.21
LINC02535-201ENST00000455071 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
LINC02535-201ENST00000455071 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
LINC02535-201ENST00000455071 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
LINC02535-201ENST00000455071 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
LINC02535-201ENST00000455071 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
LINC02535-201ENST00000455071 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
LINC02535-201ENST00000455071 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
LINC02535-201ENST00000455071 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
LINC02535-201ENST00000455071 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
LINC02535-201ENST00000455071 ABCC9O60706 1549 aa13.09□□□□□ -0.31
LINC02535-201ENST00000455071 SCRIBQ14160 1630 aa13.09□□□□□ -0.31
LINC02535-201ENST00000455071 NACADO15069 1562 aa13.01□□□□□ -0.33
LINC02535-201ENST00000455071 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
LINC02535-201ENST00000455071 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
LINC02535-201ENST00000455071 UNC13AQ9UPW8 1703 aa12.77□□□□□ -0.36
LINC02535-201ENST00000455071 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
LINC02535-201ENST00000455071 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
LINC02535-201ENST00000455071 WIZO95785 1651 aa12.66□□□□□ -0.38
LINC02535-201ENST00000455071 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
LINC02535-201ENST00000455071 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
LINC02535-201ENST00000455071 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
LINC02535-201ENST00000455071 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.41
LINC02535-201ENST00000455071 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
LINC02535-201ENST00000455071 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
LINC02535-201ENST00000455071 SMARCA2P51531 1590 aa12.41□□□□□ -0.42
LINC02535-201ENST00000455071 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
LINC02535-201ENST00000455071 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
LINC02535-201ENST00000455071 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
LINC02535-201ENST00000455071 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC02535-201ENST00000455071 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
LINC02535-201ENST00000455071 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
LINC02535-201ENST00000455071 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
LINC02535-201ENST00000455071 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
LINC02535-201ENST00000455071 HRCP23327 699 aa12.2□□□□□ -0.46
LINC02535-201ENST00000455071 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
LINC02535-201ENST00000455071 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
LINC02535-201ENST00000455071 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
LINC02535-201ENST00000455071 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
LINC02535-201ENST00000455071 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
LINC02535-201ENST00000455071 SOGA1O94964 1423 aa12.07□□□□□ -0.48
LINC02535-201ENST00000455071 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
LINC02535-201ENST00000455071 WRNQ14191 1432 aaPredicted RBP eCLIP12.05□□□□□ -0.48
LINC02535-201ENST00000455071 RUSC2Q8N2Y8 1516 aa12.04□□□□□ -0.48
LINC02535-201ENST00000455071 EEA1Q15075 1411 aa12.03□□□□□ -0.48
LINC02535-201ENST00000455071 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
LINC02535-201ENST00000455071 NCAPD3P42695 1498 aa11.99□□□□□ -0.49
LINC02535-201ENST00000455071 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
LINC02535-201ENST00000455071 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
LINC02535-201ENST00000455071 KIF21BO75037 1637 aa11.97□□□□□ -0.49
LINC02535-201ENST00000455071 PRDM2Q13029 1718 aa11.96□□□□□ -0.49
LINC02535-201ENST00000455071 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
LINC02535-201ENST00000455071 TNIKQ9UKE5 1360 aa11.94□□□□□ -0.5
LINC02535-201ENST00000455071 GOLGA3Q08378 1498 aa11.93□□□□□ -0.5
LINC02535-201ENST00000455071 PPARGC1BQ86YN6 1023 aaKnown RBP11.93□□□□□ -0.5
LINC02535-201ENST00000455071 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
LINC02535-201ENST00000455071 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
LINC02535-201ENST00000455071 CFTRP13569 1480 aa11.85□□□□□ -0.51
LINC02535-201ENST00000455071 CUX1P39880 1505 aa11.85□□□□□ -0.51
LINC02535-201ENST00000455071 RAPGEF2Q9Y4G8 1499 aa11.81□□□□□ -0.52
LINC02535-201ENST00000455071 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
LINC02535-201ENST00000455071 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
LINC02535-201ENST00000455071 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
LINC02535-201ENST00000455071 ZEB1P37275 1124 aaPredicted RBP11.75□□□□□ -0.53
LINC02535-201ENST00000455071 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
LINC02535-201ENST00000455071 CLIP1P30622 1438 aa11.75□□□□□ -0.53
LINC02535-201ENST00000455071 VPS8Q8N3P4 1428 aa11.71□□□□□ -0.53
LINC02535-201ENST00000455071 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
LINC02535-201ENST00000455071 KIF27Q86VH2 1401 aa11.68□□□□□ -0.54
LINC02535-201ENST00000455071 TTBK1Q5TCY1 1321 aaPredicted RBP11.67□□□□□ -0.54
LINC02535-201ENST00000455071 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
LINC02535-201ENST00000455071 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
LINC02535-201ENST00000455071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
LINC02535-201ENST00000455071 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
LINC02535-201ENST00000455071 CUX2O14529 1486 aa11.61□□□□□ -0.55
LINC02535-201ENST00000455071 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
LINC02535-201ENST00000455071 NESP48681 1621 aa11.58□□□□□ -0.56
LINC02535-201ENST00000455071 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
LINC02535-201ENST00000455071 CCER1Q8TC90 406 aaPredicted RBP11.56□□□□□ -0.56
LINC02535-201ENST00000455071 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
LINC02535-201ENST00000455071 ARHGAP35Q9NRY4 1499 aa11.56□□□□□ -0.56
LINC02535-201ENST00000455071 IGF1RP08069 1367 aa11.55□□□□□ -0.56
LINC02535-201ENST00000455071 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
LINC02535-201ENST00000455071 RANGAP1P46060 587 aaPredicted RBP11.54□□□□□ -0.56
LINC02535-201ENST00000455071 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
LINC02535-201ENST00000455071 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
LINC02535-201ENST00000455071 KIF21AQ7Z4S6 1674 aa11.5□□□□□ -0.57
LINC02535-201ENST00000455071 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
LINC02535-201ENST00000455071 CUL7Q14999 1698 aa11.5□□□□□ -0.57
LINC02535-201ENST00000455071 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
LINC02535-201ENST00000455071 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
LINC02535-201ENST00000455071 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
LINC02535-201ENST00000455071 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
LINC02535-201ENST00000455071 APLP2Q06481 763 aa11.48□□□□□ -0.57
LINC02535-201ENST00000455071 ABCA5Q8WWZ7 1642 aa11.47□□□□□ -0.57
LINC02535-201ENST00000455071 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.58
LINC02535-201ENST00000455071 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
LINC02535-201ENST00000455071 KANK4Q5T7N3 995 aaPredicted RBP11.44□□□□□ -0.58
LINC02535-201ENST00000455071 PCF11O94913 1555 aaKnown RBP11.43□□□□□ -0.58
LINC02535-201ENST00000455071 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms